RNA–Protein interactions for RNA: ENST00000390367.3

TRBV11-1-201, Transcript of T cell receptor beta variable 11-1, humanhuman

APPRIS P1 BASIC

Gene TRBV11-1, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1-201ENST00000390367 F13A1P00488 732 aa11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 ADD1P35611 737 aaKnown RBP11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 ST3GAL1Q11201 340 aa11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 GNL2Q13823 731 aaKnown RBP11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 SAFBQ15424 915 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 CLEC17AQ6ZS10 378 aa11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 TMEM179Q6ZVK1 233 aa11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 CCDC144CPQ8IYA2 1237 aa11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 SLC44A5Q8NCS7 719 aa11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 SLC26A6Q9BXS9 759 aa11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 RNF26Q9BY78 433 aaPredicted RBP11.46□□□□□ -0.57
TRBV11-1-201ENST00000390367 JAK2O60674 1132 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 BAG4O95429 457 aaKnown RBP11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 PARP1P09874 1014 aaKnown RBP11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 MCM4P33991 863 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 SHMT1P34896 483 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 TROAPQ12815 778 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 ABCB5Q2M3G0 1257 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 C9orf131Q5VYM1 1079 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 DCAF15Q66K64 600 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 TATDN1Q6P1N9 297 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 METTL16Q86W50 562 aaKnown RBP11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 RAB11FIP4Q86YS3 637 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 TMEM47Q9BQJ4 181 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 IL17RBQ9NRM6 502 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 GINM1Q9NU53 330 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 MTMR4Q9NYA4 1195 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 GPRC5DQ9NZD1 345 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 PCDHAC2Q9Y5I4 1007 aa11.45□□□□□ -0.58
TRBV11-1-201ENST00000390367 FOCADQ5VW36 1801 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 ZNF541Q9H0D2 1346 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 COL4A5P29400 1685 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 SMIM22K7EJ46 135 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 PRPF3O43395 683 aaKnown RBP11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 CTDNEP1O95476 244 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 AKR1B1P15121 316 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 RXRAP19793 462 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 SMARCA1P28370 1054 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 CDC27P30260 824 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 NBPF9Q3BBW0 867 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 ATL3Q6DD88 541 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 MCTP1Q6DN14 999 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 ZFPM1Q8IX07 1006 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 CEP95Q96GE4 821 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 ALG1Q9BT22 464 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 MYL10Q9BUA6 226 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 SH2D4AQ9H788 454 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 SENP2Q9HC62 589 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 SYNPO2Q9UMS6 1093 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 MTMR6Q9Y217 621 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 PPP2R3BQ9Y5P8 575 aa11.44□□□□□ -0.58
TRBV11-1-201ENST00000390367 NMT2O60551 498 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 KRT85P78386 507 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 ATP2B2Q01814 1243 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 EVX2Q03828 476 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 NBR1Q14596 966 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 RASA3Q14644 834 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 GRM4Q14833 912 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 TBC1D10BQ4KMP7 808 aaPredicted RBP11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 ASPRV1Q53RT3 343 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 FOXD4L5Q5VV16 416 aaPredicted RBP11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 RCSD1Q6JBY9 416 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 SAMD7Q7Z3H4 446 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 FAM177A1Q8N128 213 aaPredicted RBP11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 FOXD4L4Q8WXT5 416 aaPredicted RBP11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 ZNF396Q96N95 335 aaPredicted RBP11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 ARHGEF10LQ9HCE6 1279 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 ADARB2Q9NS39 739 aaKnown RBP11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 NYAP2Q9P242 653 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 CLIP2Q9UDT6 1046 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 CFAP45Q9UL16 551 aa11.43□□□□□ -0.58
TRBV11-1-201ENST00000390367 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 ECM29Q5VYK3 1845 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 YBX3P16989 372 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 NOVP48745 357 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 ICA1Q05084 483 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 PKP1Q13835 747 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 NTRK3Q16288 839 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 SUPT20HL1Q3ZLR7 823 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 GPATCH4Q5T3I0 446 aaKnown RBP11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 TMTC3Q6ZXV5 915 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 SH3BP5LQ7L8J4 393 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 BRAPQ7Z569 592 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 FBXO18Q8NFZ0 1043 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 NKX2-3Q8TAU0 364 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 CCDC12Q8WUD4 166 aaPredicted RBP11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 PHKBQ93100 1093 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 SCAND2PQ9GZW5 306 aaPredicted RBP11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 SEC63Q9UGP8 760 aaKnown RBP11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 HACL1Q9UJ83 578 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 ZDHHC9Q9Y397 364 aa11.42□□□□□ -0.58
TRBV11-1-201ENST00000390367 DDX60LQ5H9U9 1706 aaKnown RBP11.41□□□□□ -0.58
TRBV11-1-201ENST00000390367 IGKV6D-41A0A0C4DH26 115 aa11.41□□□□□ -0.58
TRBV11-1-201ENST00000390367 IQCA1LA6NCM1 817 aa11.41□□□□□ -0.58
TRBV11-1-201ENST00000390367 ASNSP08243 561 aa11.41□□□□□ -0.58
TRBV11-1-201ENST00000390367 FDPSP14324 419 aaKnown RBP11.41□□□□□ -0.58
TRBV11-1-201ENST00000390367 PRELPP51888 382 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms