RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 NUDT12Q9BQG2 462 aa16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 HTATIP2Q9BUP3 242 aa16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 BCL11AQ9H165 835 aa16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 RBPJLQ9UBG7 517 aa16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 RABGAP1Q9Y3P9 1069 aa16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 MYH7P12883 1935 aa16.39■□□□□ 0.21
TRBV4-1-201ENST00000390357 NAV1Q8NEY1 1877 aa16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 GLRX3O76003 335 aaKnown RBP16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 INHAP05111 366 aa16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 ERVK-9P63128 1117 aa16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 ERVK-24P63145 666 aa16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 TMEM179Q6ZVK1 233 aa16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 LCORLQ8N3X6 602 aa16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 U2AF1L4Q8WU68 220 aaKnown RBP16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 SDR42E1Q8WUS8 393 aa16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 HOXC10Q9NYD6 342 aa16.38■□□□□ 0.21
TRBV4-1-201ENST00000390357 HMGCRP04035 888 aa16.37■□□□□ 0.21
TRBV4-1-201ENST00000390357 EDC3Q96F86 508 aaKnown RBP16.37■□□□□ 0.21
TRBV4-1-201ENST00000390357 UNC93B1Q9H1C4 597 aa16.37■□□□□ 0.21
TRBV4-1-201ENST00000390357 SH2D4AQ9H788 454 aa16.37■□□□□ 0.21
TRBV4-1-201ENST00000390357 ARMT1Q9H993 441 aa16.37■□□□□ 0.21
TRBV4-1-201ENST00000390357 PAK6Q9NQU5 681 aaPredicted RBP16.37■□□□□ 0.21
TRBV4-1-201ENST00000390357 RPTORQ8N122 1335 aa16.37■□□□□ 0.21
TRBV4-1-201ENST00000390357 MBD4O95243 580 aa16.36■□□□□ 0.21
TRBV4-1-201ENST00000390357 TFRCP02786 760 aaKnown RBP16.36■□□□□ 0.21
TRBV4-1-201ENST00000390357 ZFYP08048 801 aaPredicted RBP16.36■□□□□ 0.21
TRBV4-1-201ENST00000390357 ELNP15502 786 aa16.36■□□□□ 0.21
TRBV4-1-201ENST00000390357 Q3C1V9 767 aa16.36■□□□□ 0.21
TRBV4-1-201ENST00000390357 C12orf60Q5U649 245 aa16.36■□□□□ 0.21
TRBV4-1-201ENST00000390357 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
TRBV4-1-201ENST00000390357 HMX1Q9NP08 348 aaPredicted RBP16.36■□□□□ 0.21
TRBV4-1-201ENST00000390357 MYH8P13535 1937 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 GUCY1A2P33402 732 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 COG2Q14746 738 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 SEPT2Q15019 361 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 SHROOM1Q2M3G4 852 aaPredicted RBP16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 PLEKHH3Q7Z736 793 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 UBE2Q1Q7Z7E8 422 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 KBTBD3Q8NAB2 608 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 ANKLE1Q8NAG6 615 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 LPAR1Q92633 364 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 DPF3Q92784 378 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 CRISPLD2Q9H0B8 497 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 ARHGEF10LQ9HCE6 1279 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 SLC4A4Q9Y6R1 1079 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 DDX60LQ5H9U9 1706 aaKnown RBP16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 TTC41PQ6P2S7 1318 aa16.35■□□□□ 0.21
TRBV4-1-201ENST00000390357 USP17L12C9JPN9 530 aa16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 USP17L21D6R901 530 aa16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 ERC2O15083 957 aa16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 SMARCA5O60264 1052 aaPredicted RBP16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 GNAT2P19087 354 aa16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 VCAM1P19320 739 aa16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 RGS2P41220 211 aa16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 ZYXQ15942 572 aaKnown RBP16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 ACER1Q8TDN7 264 aa16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 DEFB118Q96PH6 123 aa16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 CWC22Q9HCG8 908 aaKnown RBP16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 ARPP21Q9UBL0 812 aaPredicted RBP16.34■□□□□ 0.21
TRBV4-1-201ENST00000390357 CDK8P49336 464 aa16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 AAMPQ13685 434 aa16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 SBK1Q52WX2 424 aa16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 GPR142Q7Z601 462 aa16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 PAGR1Q9BTK6 254 aa16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 PCDH10Q9P2E7 1040 aa16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 TMX2Q9Y320 296 aa16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 NR2E3Q9Y5X4 410 aa16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.2
TRBV4-1-201ENST00000390357 PLXNB2O15031 1838 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 RNF113AO15541 343 aaKnown RBP16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 PRKAB2O43741 272 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 STRNO43815 780 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 FARP2O94887 1054 aaPredicted RBP16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 CYP2B6P20813 491 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 MORN1Q5T089 497 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 MB21D1Q8N884 522 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 APPBP2Q92624 585 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 USP6NLQ92738 828 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 STRBPQ96SI9 672 aaKnown RBP16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 RPAP3Q9H6T3 665 aaPredicted RBP16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 KANSL2Q9H9L4 492 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 ZNF287Q9HBT7 754 aa16.32■□□□□ 0.2
TRBV4-1-201ENST00000390357 BRCA2P51587 3418 aa16.31■□□□□ 0.2
TRBV4-1-201ENST00000390357 A0A1W2PRG0 241 aa16.31■□□□□ 0.2
TRBV4-1-201ENST00000390357 SLC15A5A6NIM6 579 aa16.31■□□□□ 0.2
TRBV4-1-201ENST00000390357 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
TRBV4-1-201ENST00000390357 NECAB2Q7Z6G3 386 aa16.31■□□□□ 0.2
TRBV4-1-201ENST00000390357 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
TRBV4-1-201ENST00000390357 CYP2D6P10635 497 aa16.3■□□□□ 0.2
TRBV4-1-201ENST00000390357 ZKSCAN1P17029 563 aaPredicted RBP16.3■□□□□ 0.2
TRBV4-1-201ENST00000390357 PTPREP23469 700 aa16.3■□□□□ 0.2
TRBV4-1-201ENST00000390357 MAP2K5Q13163 448 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms