RNA–Protein interactions for RNA: ENST00000390243.2

IGKV4-1-201, Transcript of immunoglobulin kappa variable 4-1, humanhuman

APPRIS P1 BASIC

Gene IGKV4-1, Length 538 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV4-1-201ENST00000390243 IL25Q9H293 177 aa20.55■□□□□ 0.88
IGKV4-1-201ENST00000390243 ARPP21Q9UBL0 812 aaPredicted RBP20.55■□□□□ 0.88
IGKV4-1-201ENST00000390243 MPHOSPH10O00566 681 aaKnown RBP20.54■□□□□ 0.88
IGKV4-1-201ENST00000390243 SBK1Q52WX2 424 aa20.54■□□□□ 0.88
IGKV4-1-201ENST00000390243 IFNL3Q8IZI9 196 aa20.54■□□□□ 0.88
IGKV4-1-201ENST00000390243 TRIM47Q96LD4 638 aa20.54■□□□□ 0.88
IGKV4-1-201ENST00000390243 TBC1D2Q9BYX2 928 aa20.54■□□□□ 0.88
IGKV4-1-201ENST00000390243 ASCC2Q9H1I8 757 aaPredicted RBP20.54■□□□□ 0.88
IGKV4-1-201ENST00000390243 MYH4Q9Y623 1939 aa20.54■□□□□ 0.88
IGKV4-1-201ENST00000390243 MINDY4BA8MYZ0 360 aa20.53■□□□□ 0.88
IGKV4-1-201ENST00000390243 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
IGKV4-1-201ENST00000390243 USP17L10C9JJH3 530 aa20.53■□□□□ 0.88
IGKV4-1-201ENST00000390243 RASA1P20936 1047 aa20.53■□□□□ 0.88
IGKV4-1-201ENST00000390243 FBXO46Q6PJ61 603 aaPredicted RBP20.53■□□□□ 0.88
IGKV4-1-201ENST00000390243 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
IGKV4-1-201ENST00000390243 GINM1Q9NU53 330 aa20.53■□□□□ 0.88
IGKV4-1-201ENST00000390243 SLC45A1Q9Y2W3 748 aa20.53■□□□□ 0.88
IGKV4-1-201ENST00000390243 CCDC85CA6NKD9 419 aa20.52■□□□□ 0.88
IGKV4-1-201ENST00000390243 PRDM1O75626 825 aa20.52■□□□□ 0.88
IGKV4-1-201ENST00000390243 TDO2P48775 406 aa20.52■□□□□ 0.88
IGKV4-1-201ENST00000390243 EFCC1Q9HA90 598 aa20.52■□□□□ 0.88
IGKV4-1-201ENST00000390243 SWAP70Q9UH65 585 aa20.52■□□□□ 0.88
IGKV4-1-201ENST00000390243 PTCH2Q9Y6C5 1203 aa20.52■□□□□ 0.88
IGKV4-1-201ENST00000390243 VCAM1P19320 739 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 GIMAP6Q6P9H5 292 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 ANKRD13CQ8N6S4 541 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 NKX2-3Q8TAU0 364 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 C12orf42Q96LP6 360 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 FEZ1Q99689 392 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 KIAA1683Q9H0B3 1180 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 TXNRD2Q9NNW7 524 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 INCENPQ9NQS7 918 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 PTPN22Q9Y2R2 807 aa20.51■□□□□ 0.87
IGKV4-1-201ENST00000390243 COL11A1P12107 1806 aaPredicted RBP20.5■□□□□ 0.87
IGKV4-1-201ENST00000390243 RBBP6Q7Z6E9 1792 aaKnown RBP20.5■□□□□ 0.87
IGKV4-1-201ENST00000390243 PATL2C9JE40 543 aaKnown RBP20.5■□□□□ 0.87
IGKV4-1-201ENST00000390243 APPP05067 770 aa20.5■□□□□ 0.87
IGKV4-1-201ENST00000390243 SDSP20132 328 aa20.5■□□□□ 0.87
IGKV4-1-201ENST00000390243 TMEM179Q6ZVK1 233 aa20.5■□□□□ 0.87
IGKV4-1-201ENST00000390243 SMCR8Q8TEV9 937 aaPredicted RBP20.5■□□□□ 0.87
IGKV4-1-201ENST00000390243 GNAT2P19087 354 aa20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 SOX10P56693 466 aa20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 ICA1Q05084 483 aa20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 TTC22Q5TAA0 569 aa20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 USP17L2Q6R6M4 530 aa20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 DDRGK1Q96HY6 314 aa20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 P2RX7Q99572 595 aaKnown RBP20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 NBPF3Q9H094 633 aa20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 CABP5Q9NP86 173 aa20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 TMOD4Q9NZQ9 345 aa20.49■□□□□ 0.87
IGKV4-1-201ENST00000390243 C19orf81C9J6K1 198 aa20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 OSBPP22059 807 aa20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 HOXA7P31268 230 aaPredicted RBP20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 PSMC4P43686 418 aa20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 CTDSPL2Q05D32 466 aa20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 PPARAQ07869 468 aa20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 LRRFIP1Q32MZ4 808 aaKnown RBP20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 NAPBQ9H115 298 aa20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 HELLSQ9NRZ9 838 aa20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 GABRQQ9UN88 632 aa20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 CCDC171Q6TFL3 1326 aa20.48■□□□□ 0.87
IGKV4-1-201ENST00000390243 HERVK_113P62684 666 aa20.47■□□□□ 0.87
IGKV4-1-201ENST00000390243 PRKCZQ05513 592 aa20.47■□□□□ 0.87
IGKV4-1-201ENST00000390243 AMOTL1Q8IY63 956 aa20.47■□□□□ 0.87
IGKV4-1-201ENST00000390243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.47■□□□□ 0.87
IGKV4-1-201ENST00000390243 IGKV6D-41A0A0C4DH26 115 aa20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 CNMDO75829 334 aa20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 EEF2P13639 858 aaKnown RBP20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 IRX3P78415 501 aaPredicted RBP20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 PKN2Q16513 984 aaKnown RBP20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 FAM110CQ1W6H9 321 aa20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 MCMDC2Q4G0Z9 681 aa20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 RASGRP2Q7LDG7 609 aa20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 SPICE1Q8N0Z3 855 aa20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 RPAP3Q9H6T3 665 aaPredicted RBP20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 PNMA3Q9UL41 463 aa20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 PLIN4Q96Q06 1357 aa20.46■□□□□ 0.87
IGKV4-1-201ENST00000390243 MKI67P46013 3256 aaKnown RBP20.45■□□□□ 0.86
IGKV4-1-201ENST00000390243 HSPD1P10809 573 aaKnown RBP20.45■□□□□ 0.86
IGKV4-1-201ENST00000390243 CWC27Q6UX04 472 aaKnown RBP20.45■□□□□ 0.86
IGKV4-1-201ENST00000390243 SH3TC2Q8TF17 1288 aa20.45■□□□□ 0.86
IGKV4-1-201ENST00000390243 SPDYE16A6NNV3 312 aaPredicted RBP20.44■□□□□ 0.86
IGKV4-1-201ENST00000390243 FAM47AQ5JRC9 791 aa20.44■□□□□ 0.86
IGKV4-1-201ENST00000390243 CCDC17Q96LX7 622 aa20.44■□□□□ 0.86
IGKV4-1-201ENST00000390243 RBPJLQ9UBG7 517 aa20.44■□□□□ 0.86
IGKV4-1-201ENST00000390243 MORF4L1Q9UBU8 362 aa20.44■□□□□ 0.86
IGKV4-1-201ENST00000390243 SRRDQ9UH36 339 aa20.44■□□□□ 0.86
IGKV4-1-201ENST00000390243 TMX2Q9Y320 296 aa20.44■□□□□ 0.86
IGKV4-1-201ENST00000390243 TNRC18O15417 2968 aaPredicted RBP20.44■□□□□ 0.86
IGKV4-1-201ENST00000390243 MYPNQ86TC9 1320 aa20.44■□□□□ 0.86
IGKV4-1-201ENST00000390243 FGAP02671 866 aa20.43■□□□□ 0.86
IGKV4-1-201ENST00000390243 HAND2P61296 217 aa20.43■□□□□ 0.86
IGKV4-1-201ENST00000390243 ATP2B2Q01814 1243 aa20.43■□□□□ 0.86
IGKV4-1-201ENST00000390243 Q3C1V9 767 aa20.43■□□□□ 0.86
IGKV4-1-201ENST00000390243 CATSPERGQ6ZRH7 1159 aa20.43■□□□□ 0.86
IGKV4-1-201ENST00000390243 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
IGKV4-1-201ENST00000390243 CEP95Q96GE4 821 aa20.43■□□□□ 0.86
IGKV4-1-201ENST00000390243 PAGR1Q9BTK6 254 aa20.43■□□□□ 0.86
IGKV4-1-201ENST00000390243 PORCNQ9H237 461 aa20.43■□□□□ 0.86
IGKV4-1-201ENST00000390243 VCPKMTQ9H867 229 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms