RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 KIAA1683Q9H0B3 1180 aa20.89■□□□□ 0.93
CD9-202ENST00000382515 TOMM22Q9NS69 142 aa20.89■□□□□ 0.93
CD9-202ENST00000382515 NYAP2Q9P242 653 aa20.89■□□□□ 0.93
CD9-202ENST00000382515 CDK5RAP2Q96SN8 1893 aa20.88■□□□□ 0.93
CD9-202ENST00000382515 ZKSCAN1P17029 563 aaPredicted RBP20.88■□□□□ 0.93
CD9-202ENST00000382515 TSGA10IPQ3SY00 556 aa20.88■□□□□ 0.93
CD9-202ENST00000382515 STK11IPQ8N1F8 1099 aa20.88■□□□□ 0.93
CD9-202ENST00000382515 MKL1Q969V6 931 aa20.88■□□□□ 0.93
CD9-202ENST00000382515 TTC14Q96N46 770 aa20.88■□□□□ 0.93
CD9-202ENST00000382515 SLC45A1Q9Y2W3 748 aa20.88■□□□□ 0.93
CD9-202ENST00000382515 DDX60LQ5H9U9 1706 aaKnown RBP20.87■□□□□ 0.93
CD9-202ENST00000382515 CCL15-CCL14A0A0B4J2E2 113 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 IGKV6D-41A0A0C4DH26 115 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 TRIM75PA6NK02 468 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 ICA1Q05084 483 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 MKRN3Q13064 507 aaKnown RBP20.87■□□□□ 0.93
CD9-202ENST00000382515 PABPC4Q13310 644 aaKnown RBP eCLIP20.87■□□□□ 0.93
CD9-202ENST00000382515 CCL15Q16663 113 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 USP17L2Q6R6M4 530 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 IQCA1Q86XH1 822 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.87■□□□□ 0.93
CD9-202ENST00000382515 MTMR4Q9NYA4 1195 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 TMOD4Q9NZQ9 345 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 TMX2Q9Y320 296 aa20.87■□□□□ 0.93
CD9-202ENST00000382515 PLIN4Q96Q06 1357 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 NAV1Q8NEY1 1877 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 TTLL1O95922 423 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 KRT32Q14532 448 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 CREB3L3Q68CJ9 461 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 ANKRD23Q86SG2 305 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 IFNL1Q8IU54 200 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 TBC1D10CQ8IV04 446 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 NCOA7Q8NI08 942 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 C12orf42Q96LP6 360 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 NBPF3Q9H094 633 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 WBP1LQ9NX94 342 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 SAGE1Q9NXZ1 904 aa20.86■□□□□ 0.93
CD9-202ENST00000382515 SLC27A2O14975 620 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 NOVP48745 357 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 FAM47AQ5JRC9 791 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 RRP12Q5JTH9 1297 aaKnown RBP20.85■□□□□ 0.93
CD9-202ENST00000382515 SIAH1Q8IUQ4 282 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 BRI3BPQ8WY22 251 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 LPAR1Q92633 364 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 ZIC5Q96T25 663 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 FEZ1Q99689 392 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 MTA3Q9BTC8 594 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 CFHR5Q9BXR6 569 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 INCENPQ9NQS7 918 aa20.85■□□□□ 0.93
CD9-202ENST00000382515 E7EWF7 191 aa20.84■□□□□ 0.93
CD9-202ENST00000382515 EEF2P13639 858 aaKnown RBP20.84■□□□□ 0.93
CD9-202ENST00000382515 MCCP23508 829 aa20.84■□□□□ 0.93
CD9-202ENST00000382515 RALYLQ86SE5 291 aaKnown RBP20.84■□□□□ 0.93
CD9-202ENST00000382515 DGKHQ86XP1 1220 aa20.84■□□□□ 0.93
CD9-202ENST00000382515 KCNB2Q92953 911 aa20.84■□□□□ 0.93
CD9-202ENST00000382515 USP26Q9BXU7 913 aa20.84■□□□□ 0.93
CD9-202ENST00000382515 BAZ2AQ9UIF9 1905 aaKnown RBP20.83■□□□□ 0.93
CD9-202ENST00000382515 HSPA4P34932 840 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 MTMR2Q13614 643 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 MOGSQ13724 837 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 SHROOM1Q2M3G4 852 aaPredicted RBP20.83■□□□□ 0.93
CD9-202ENST00000382515 CEP95Q96GE4 821 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 PTPN18Q99952 460 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 GOPCQ9HD26 462 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 ZSWIM5Q9P217 1185 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 CLIP2Q9UDT6 1046 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 AGTPBP1Q9UPW5 1226 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 TACC3Q9Y6A5 838 aa20.83■□□□□ 0.93
CD9-202ENST00000382515 SIPA1L1O43166 1804 aa20.83■□□□□ 0.92
CD9-202ENST00000382515 BTBD19C9JJ37 291 aa20.82■□□□□ 0.92
CD9-202ENST00000382515 HMGB1P09429 215 aaKnown RBP20.82■□□□□ 0.92
CD9-202ENST00000382515 HOXA7P31268 230 aaPredicted RBP20.82■□□□□ 0.92
CD9-202ENST00000382515 HMGCS2P54868 508 aa20.82■□□□□ 0.92
CD9-202ENST00000382515 CCDC84Q86UT8 332 aaPredicted RBP20.82■□□□□ 0.92
CD9-202ENST00000382515 ACER1Q8TDN7 264 aa20.82■□□□□ 0.92
CD9-202ENST00000382515 ANKS1AQ92625 1134 aa20.82■□□□□ 0.92
CD9-202ENST00000382515 VCPKMTQ9H867 229 aa20.82■□□□□ 0.92
CD9-202ENST00000382515 EMILIN3Q9NT22 766 aa20.82■□□□□ 0.92
CD9-202ENST00000382515 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.82■□□□□ 0.92
CD9-202ENST00000382515 PNMA3Q9UL41 463 aa20.82■□□□□ 0.92
CD9-202ENST00000382515 A0A1W2PRG0 241 aa20.81■□□□□ 0.92
CD9-202ENST00000382515 KDM4AO75164 1064 aa20.81■□□□□ 0.92
CD9-202ENST00000382515 SART3Q15020 963 aaKnown RBP20.81■□□□□ 0.92
CD9-202ENST00000382515 IL17RBQ9NRM6 502 aa20.81■□□□□ 0.92
CD9-202ENST00000382515 RNF186Q9NXI6 227 aa20.81■□□□□ 0.92
CD9-202ENST00000382515 NEDD4P46934 1319 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 B4E1Z4 1266 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 OSBPP22059 807 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 ATP2B2Q01814 1243 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
CD9-202ENST00000382515 GPAT2Q6NUI2 795 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 GADL1Q6ZQY3 521 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 TMTC2Q8N394 836 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 ZSCAN10Q96SZ4 725 aaPredicted RBP20.8■□□□□ 0.92
CD9-202ENST00000382515 UBAC1Q9BSL1 405 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 ZFYVE28Q9HCC9 887 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
CD9-202ENST00000382515 ERICH2A1L162 156 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 USP17L15C9J2P7 530 aa20.79■□□□□ 0.92
CD9-202ENST00000382515 USP17L13C9JLJ4 530 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms