RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 TMEM247A6NEH6 219 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 APOA4P06727 396 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 CYTH1Q15438 398 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 TSC22D1Q15714 1073 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 CFAP70Q5T0N1 1121 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 KIFC2Q96AC6 838 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 MINK1Q8N4C8 1332 aaPredicted RBP10.89□□□□□ -0.67
VLDLR-203ENST00000382100 GNAT3A8MTJ3 354 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 LCA5Q86VQ0 697 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 TRAPPC8Q9Y2L5 1435 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 CALUO43852 315 aaPredicted RBP10.89□□□□□ -0.67
VLDLR-203ENST00000382100 RBSNQ9H1K0 784 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 GRIN2BQ13224 1484 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 ZBTB43O43298 467 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 STX2P32856 288 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.89□□□□□ -0.67
VLDLR-203ENST00000382100 FAM129AQ9BZQ8 928 aa10.89□□□□□ -0.67
VLDLR-203ENST00000382100 TROQ12816 1431 aaPredicted RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 EIF2S1P05198 315 aaKnown RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 GLE1Q53GS7 698 aaKnown RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 MMS22LQ6ZRQ5 1243 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 SELENOSQ9BQE4 189 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 SMARCAL1Q9NZC9 954 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 SENP1Q9P0U3 644 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 KDM5DQ9BY66 1539 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 MYO1EQ12965 1108 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 ATAD2BQ9ULI0 1458 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 KHDRBS2Q5VWX1 349 aaKnown RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 MRPS26Q9BYN8 205 aaKnown RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 SEPT3Q9UH03 358 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 NCOA1Q15788 1441 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 REREQ9P2R6 1566 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 PTPN23Q9H3S7 1636 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 IFIT3O14879 490 aaKnown RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 ZNF500O60304 480 aaPredicted RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 GARSP41250 739 aaKnown RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 PNMA8AQ86V59 439 aaPredicted RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 MRFAP1L1Q96HT8 127 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 SLC4A3P48751 1232 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 PALM2Q8IXS6 379 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 GIPC2Q8TF65 315 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 SPTBN1Q01082 2364 aaKnown RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 CACNA1CQ13936 2221 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 CFAP65Q6ZU64 1925 aaKnown RBP10.88□□□□□ -0.67
VLDLR-203ENST00000382100 TEX11Q8IYF3 940 aa10.88□□□□□ -0.67
VLDLR-203ENST00000382100 SETD1BQ9UPS6 1966 aaKnown RBP10.87□□□□□ -0.67
VLDLR-203ENST00000382100 RNF207Q6ZRF8 634 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 SECISBP2LQ93073 1101 aaKnown RBP10.87□□□□□ -0.67
VLDLR-203ENST00000382100 CAV1Q03135 178 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 RAB3GAP1Q15042 981 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 EPS8L2Q9H6S3 715 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 NOB1Q9ULX3 412 aaKnown RBP10.87□□□□□ -0.67
VLDLR-203ENST00000382100 SAR1BQ9Y6B6 198 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 CFAP73A6NFT4 308 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 ARHGDIAP52565 204 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 KIF24Q5T7B8 1368 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 PLIN1O60240 522 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 WTAPQ15007 396 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 KRT71Q3SY84 523 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 ZNF530Q6P9A1 599 aaPredicted RBP10.87□□□□□ -0.67
VLDLR-203ENST00000382100 FAM83GA6ND36 823 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 DEAF1O75398 565 aaPredicted RBP10.87□□□□□ -0.67
VLDLR-203ENST00000382100 ASIC1P78348 528 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 METTL14Q9HCE5 456 aaKnown RBP10.87□□□□□ -0.67
VLDLR-203ENST00000382100 CDH2P19022 906 aaPredicted RBP10.87□□□□□ -0.67
VLDLR-203ENST00000382100 DEFA1P59665 94 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 DEFA3P59666 94 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 TRIM55Q9BYV6 548 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 NLRP6P59044 892 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 UBXN1Q04323 297 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 CCDC197Q8NCU1 140 aa10.87□□□□□ -0.67
VLDLR-203ENST00000382100 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 MAP3K13O43283 966 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 UBLCP1Q8WVY7 318 aaPredicted RBP10.86□□□□□ -0.67
VLDLR-203ENST00000382100 TTC17Q96AE7 1141 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 TRPC6Q9Y210 931 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 SPOPO43791 374 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 RTN1Q16799 776 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 WWC3Q9ULE0 1092 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 DIDO1Q9BTC0 2240 aaKnown RBP10.86□□□□□ -0.67
VLDLR-203ENST00000382100 HOXB7P09629 217 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 RSPH1Q8WYR4 309 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 RPS6KC1Q96S38 1066 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 HAUS7Q99871 368 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 FAM13AO94988 1023 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 SLFN5Q08AF3 891 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 CHUKO15111 745 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 KRBA2Q6ZNG9 492 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 ANKRD35Q8N283 1001 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 LTV1Q96GA3 475 aaPredicted RBP10.86□□□□□ -0.67
VLDLR-203ENST00000382100 UBA5Q9GZZ9 404 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 TRIM33Q9UPN9 1127 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 RTEL1-TNFRSF6BF6WH68 1400 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 PLXNC1O60486 1568 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 HCLS1P14317 486 aaPredicted RBP10.86□□□□□ -0.67
VLDLR-203ENST00000382100 RBM5P52756 815 aaKnown RBP eCLIP10.86□□□□□ -0.67
VLDLR-203ENST00000382100 STRN3Q13033 797 aa10.86□□□□□ -0.67
VLDLR-203ENST00000382100 TMEM67Q5HYA8 995 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms