RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 CD99L2Q8TCZ2 262 aa19.23■□□□□ 0.67
SNRPB-201ENST00000381342 TBC1D2Q9BYX2 928 aa19.23■□□□□ 0.67
SNRPB-201ENST00000381342 HPS5Q9UPZ3 1129 aa19.23■□□□□ 0.67
SNRPB-201ENST00000381342 TRIM75PA6NK02 468 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 USP17L5A8MUK1 530 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 TLR2O60603 784 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 RASA1P20936 1047 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 GADL1Q6ZQY3 521 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 NBPF3Q9H094 633 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 MKNK2Q9HBH9 465 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 ANAPC4Q9UJX5 808 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 AFG3L2Q9Y4W6 797 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 TACC3Q9Y6A5 838 aa19.22■□□□□ 0.67
SNRPB-201ENST00000381342 PDHXO00330 501 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 SLC3A2P08195 630 aaKnown RBP19.21■□□□□ 0.67
SNRPB-201ENST00000381342 GUCY1A2P33402 732 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 SEPT2Q15019 361 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 RAB3GAP1Q15042 981 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 CASC1Q6TDU7 716 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 OTOP1Q7RTM1 612 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 CLEC10AQ8IUN9 316 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 AS3MTQ9HBK9 375 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 CABP5Q9NP86 173 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 GINM1Q9NU53 330 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 MYH4Q9Y623 1939 aa19.21■□□□□ 0.67
SNRPB-201ENST00000381342 TBC1D10CQ8IV04 446 aa19.2■□□□□ 0.66
SNRPB-201ENST00000381342 PARK7Q99497 189 aaKnown RBP19.2■□□□□ 0.66
SNRPB-201ENST00000381342 INCENPQ9NQS7 918 aa19.2■□□□□ 0.66
SNRPB-201ENST00000381342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.661e-11■■□□□ 12.6
SNRPB-201ENST00000381342 A0A0G2JLL6 359 aaPredicted RBP19.19■□□□□ 0.66
SNRPB-201ENST00000381342 PDE4BQ07343 736 aa19.19■□□□□ 0.66
SNRPB-201ENST00000381342 SPP2Q13103 211 aa19.19■□□□□ 0.66
SNRPB-201ENST00000381342 TMEM179Q6ZVK1 233 aa19.19■□□□□ 0.66
SNRPB-201ENST00000381342 PRRT2Q7Z6L0 340 aaPredicted RBP19.19■□□□□ 0.66
SNRPB-201ENST00000381342 ZNF280CQ8ND82 737 aa19.19■□□□□ 0.66
SNRPB-201ENST00000381342 CCDC17Q96LX7 622 aa19.19■□□□□ 0.66
SNRPB-201ENST00000381342 MTMR2Q13614 643 aa19.18■□□□□ 0.66
SNRPB-201ENST00000381342 WDR18Q9BV38 432 aa19.18■□□□□ 0.66
SNRPB-201ENST00000381342 LSG1Q9H089 658 aaKnown RBP19.18■□□□□ 0.66
SNRPB-201ENST00000381342 ZNF287Q9HBT7 754 aa19.18■□□□□ 0.66
SNRPB-201ENST00000381342 ANO2Q9NQ90 1003 aa19.18■□□□□ 0.66
SNRPB-201ENST00000381342 ZNF213O14771 459 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 MLLT1Q03111 559 aaPredicted RBP19.17■□□□□ 0.66
SNRPB-201ENST00000381342 PABPC4Q13310 644 aaKnown RBP eCLIP19.17■□□□□ 0.666e-8■■□□□ 13.9
SNRPB-201ENST00000381342 MOGSQ13724 837 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 IMMTQ16891 758 aaKnown RBP19.17■□□□□ 0.66
SNRPB-201ENST00000381342 FAM47AQ5JRC9 791 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 KIAA1211Q6ZU35 1233 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.17■□□□□ 0.66
SNRPB-201ENST00000381342 TOMM22Q9NS69 142 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 CPA4Q9UI42 421 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 CTNNA3Q9UI47 895 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 PTPN22Q9Y2R2 807 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
SNRPB-201ENST00000381342 NEDD4P46934 1319 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 PLIN4Q96Q06 1357 aa19.17■□□□□ 0.66
SNRPB-201ENST00000381342 ORC4O43929 436 aa19.16■□□□□ 0.66
SNRPB-201ENST00000381342 HOXD10P28358 340 aa19.16■□□□□ 0.66
SNRPB-201ENST00000381342 HMGCS2P54868 508 aa19.16■□□□□ 0.66
SNRPB-201ENST00000381342 ICA1Q05084 483 aa19.16■□□□□ 0.66
SNRPB-201ENST00000381342 ZYXQ15942 572 aaKnown RBP19.16■□□□□ 0.66
SNRPB-201ENST00000381342 RRP12Q5JTH9 1297 aaKnown RBP19.16■□□□□ 0.66
SNRPB-201ENST00000381342 AKNAD1Q5T1N1 836 aa19.16■□□□□ 0.66
SNRPB-201ENST00000381342 ZNF444Q8N0Y2 327 aaPredicted RBP19.16■□□□□ 0.66
SNRPB-201ENST00000381342 ACER1Q8TDN7 264 aa19.16■□□□□ 0.66
SNRPB-201ENST00000381342 FEZ1Q99689 392 aa19.16■□□□□ 0.66
SNRPB-201ENST00000381342 PNMA3Q9UL41 463 aa19.16■□□□□ 0.66
SNRPB-201ENST00000381342 SLC45A1Q9Y2W3 748 aa19.16■□□□□ 0.66
SNRPB-201ENST00000381342 RBM8AQ9Y5S9 174 aaKnown RBP19.16■□□□□ 0.66
SNRPB-201ENST00000381342 GNRH1P01148 92 aa19.15■□□□□ 0.66
SNRPB-201ENST00000381342 SOX10P56693 466 aa19.15■□□□□ 0.66
SNRPB-201ENST00000381342 GPAT2Q6NUI2 795 aa19.15■□□□□ 0.66
SNRPB-201ENST00000381342 C17orf99Q6UX52 265 aa19.15■□□□□ 0.66
SNRPB-201ENST00000381342 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
SNRPB-201ENST00000381342 MAP4K1Q92918 833 aa19.15■□□□□ 0.66
SNRPB-201ENST00000381342 A0A1W2PRG0 241 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 USP17L10C9JJH3 530 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 RANBP6O60518 1105 aaKnown RBP19.14■□□□□ 0.65
SNRPB-201ENST00000381342 FGRP09769 529 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 TSPY3P0CV98 308 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 TSPY8P0CW00 308 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 RGS19P49795 217 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 PRMT2P55345 433 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 BACE1P56817 501 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 LACTBP83111 547 aaPredicted RBP19.14■□□□□ 0.65
SNRPB-201ENST00000381342 TFAP4Q01664 338 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 MFSD6Q6ZSS7 791 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 NBPF11Q86T75 865 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 PROCA1Q8NCQ7 364 aaPredicted RBP19.14■□□□□ 0.65
SNRPB-201ENST00000381342 NKX2-3Q8TAU0 364 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 TMOD4Q9NZQ9 345 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 AGTPBP1Q9UPW5 1226 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 TAF6LQ9Y6J9 622 aa19.14■□□□□ 0.65
SNRPB-201ENST00000381342 IGKV6D-41A0A0C4DH26 115 aa19.13■□□□□ 0.65
SNRPB-201ENST00000381342 TSPY2A6NKD2 308 aa19.13■□□□□ 0.65
SNRPB-201ENST00000381342 FMNL1O95466 1100 aaPredicted RBP19.13■□□□□ 0.65
SNRPB-201ENST00000381342 CYP21A2P08686 494 aa19.13■□□□□ 0.65
SNRPB-201ENST00000381342 OSBPP22059 807 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms