RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 TRMT44Q8IYL2 757 aaKnown RBP9.34□□□□□ -0.91
FAM49A-201ENST00000381323 DIAPH3Q9NSV4 1193 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 HMGCRP04035 888 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 RPAP3Q9H6T3 665 aaPredicted RBP9.34□□□□□ -0.91
FAM49A-201ENST00000381323 SLC45A1Q9Y2W3 748 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 MFAP1P55081 439 aaKnown RBP9.34□□□□□ -0.91
FAM49A-201ENST00000381323 CCDC96Q2M329 555 aa9.34□□□□□ -0.91
FAM49A-201ENST00000381323 P2RX7Q99572 595 aaKnown RBP9.34□□□□□ -0.91
FAM49A-201ENST00000381323 POTEFA5A3E0 1075 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 ZBED4O75132 1171 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 SLURP2P0DP57 97 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 ATP5JP18859 108 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 TREML2Q5T2D2 321 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 EDC3Q96F86 508 aaKnown RBP9.33□□□□□ -0.92
FAM49A-201ENST00000381323 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 ZBTB40Q9NUA8 1239 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 STX8Q9UNK0 236 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 TSPY2A6NKD2 308 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 CPXCR1Q8N123 301 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 U2AF1L4Q8WU68 220 aaKnown RBP9.33□□□□□ -0.92
FAM49A-201ENST00000381323 ARPP21Q9UBL0 812 aaPredicted RBP9.33□□□□□ -0.92
FAM49A-201ENST00000381323 RANBP6O60518 1105 aaKnown RBP9.33□□□□□ -0.92
FAM49A-201ENST00000381323 ARMC5Q96C12 935 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 KANSL2Q9H9L4 492 aa9.33□□□□□ -0.92
FAM49A-201ENST00000381323 COG2Q14746 738 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 WDR18Q9BV38 432 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 CNPY2Q9Y2B0 182 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 RNF113AO15541 343 aaKnown RBP9.32□□□□□ -0.92
FAM49A-201ENST00000381323 GJB1P08034 283 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 MTFR1Q15390 333 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 LCORLQ8N3X6 602 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 RABGAP1Q9Y3P9 1069 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 ZNF333Q96JL9 665 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 NBPF3Q9H094 633 aa9.32□□□□□ -0.92
FAM49A-201ENST00000381323 KBTBD13C9JR72 458 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 RRP1P56182 461 aaKnown RBP9.31□□□□□ -0.92
FAM49A-201ENST00000381323 ERVK-9P63128 1117 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 ERVK-24P63145 666 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 UBE3CQ15386 1083 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 APPBP2Q92624 585 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 DYNLL2Q96FJ2 89 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 UNC93B1Q9H1C4 597 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 EIF5BO60841 1220 aaKnown RBP9.31□□□□□ -0.92
FAM49A-201ENST00000381323 MX1P20591 662 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.31□□□□□ -0.92
FAM49A-201ENST00000381323 PRKAR2AP13861 404 aaKnown RBP9.31□□□□□ -0.92
FAM49A-201ENST00000381323 TSHZ3Q63HK5 1081 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 HAUS7Q99871 368 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.31□□□□□ -0.92
FAM49A-201ENST00000381323 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 ADD2P35612 726 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 DCP1AQ9NPI6 582 aaPredicted RBP9.31□□□□□ -0.92
FAM49A-201ENST00000381323 GABRQQ9UN88 632 aa9.31□□□□□ -0.92
FAM49A-201ENST00000381323 FCER1AP12319 257 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 LPAR1Q92633 364 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 CRBNQ96SW2 442 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 MPHOSPH6Q99547 160 aaKnown RBP9.3□□□□□ -0.92
FAM49A-201ENST00000381323 LNPKQ9C0E8 428 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 PRDM5Q9NQX1 630 aaPredicted RBP9.3□□□□□ -0.92
FAM49A-201ENST00000381323 CLIP2Q9UDT6 1046 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 C20orf194Q5TEA3 1177 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 MB21D1Q8N884 522 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 KBTBD3Q8NAB2 608 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 KIFC2Q96AC6 838 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 EHD4Q9H223 541 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 PRKAB2O43741 272 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 BCRP11274 1271 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 CDK8P49336 464 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 RGS19P49795 217 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 TRDNQ13061 729 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 ANKRD35Q8N283 1001 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 SSC5DA1L4H1 1573 aa9.3□□□□□ -0.92
FAM49A-201ENST00000381323 GPAA1O43292 621 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 PRDM1O75626 825 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 CYP2D6P10635 497 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 SLC44A5Q8NCS7 719 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 PXYLP1Q8TE99 480 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 RPTORQ8N122 1335 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 SGPL1O95470 568 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 VCAM1P19320 739 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 PLCD1P51178 756 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 ADGRA1Q86SQ6 560 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 C7orf61Q8IZ16 206 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 ARRDC4Q8NCT1 418 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 ACER1Q8TDN7 264 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 ATRNL1Q5VV63 1379 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 GPAT2Q6NUI2 795 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 COPB2P35606 906 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 KIAA1211Q6ZU35 1233 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 PAWRQ96IZ0 340 aaKnown RBP9.29□□□□□ -0.92
FAM49A-201ENST00000381323 APBA2Q99767 749 aa9.29□□□□□ -0.92
FAM49A-201ENST00000381323 ZHX1Q9UKY1 873 aaPredicted RBP9.29□□□□□ -0.92
FAM49A-201ENST00000381323 MSCO60682 206 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 SLC1A4P43007 532 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 CHMP4BP1P59074 171 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 CHRDL2Q6WN34 429 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 GPR142Q7Z601 462 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 MMP19Q99542 508 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 430.2 ms