RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 TREML2Q5T2D2 321 aa17.65■□□□□ 0.42
VCX3B-201ENST00000381029 TMEM179Q6ZVK1 233 aa17.65■□□□□ 0.42
VCX3B-201ENST00000381029 FASTKD5Q7L8L6 764 aaKnown RBP17.65■□□□□ 0.42
VCX3B-201ENST00000381029 C12orf42Q96LP6 360 aa17.65■□□□□ 0.42
VCX3B-201ENST00000381029 DSCC1Q9BVC3 393 aa17.65■□□□□ 0.42
VCX3B-201ENST00000381029 EMILIN3Q9NT22 766 aa17.65■□□□□ 0.42
VCX3B-201ENST00000381029 SLC45A1Q9Y2W3 748 aa17.65■□□□□ 0.42
VCX3B-201ENST00000381029 USP17L10C9JJH3 530 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 GPR25O00155 361 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 PDHXO00330 501 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 MFAP1P55081 439 aaKnown RBP17.64■□□□□ 0.41
VCX3B-201ENST00000381029 CAP1Q01518 475 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 RAB3GAP1Q15042 981 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 OTUD7BQ6GQQ9 843 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 CLEC10AQ8IUN9 316 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 NKX2-3Q8TAU0 364 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 KIAA1683Q9H0B3 1180 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 CABP5Q9NP86 173 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 INCENPQ9NQS7 918 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 AGTPBP1Q9UPW5 1226 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 PLIN4Q96Q06 1357 aa17.64■□□□□ 0.41
VCX3B-201ENST00000381029 C19orf81C9J6K1 198 aa17.63■□□□□ 0.41
VCX3B-201ENST00000381029 PRDM1O75626 825 aa17.63■□□□□ 0.41
VCX3B-201ENST00000381029 CTDSPL2Q05D32 466 aa17.63■□□□□ 0.41
VCX3B-201ENST00000381029 ORC4O43929 436 aa17.62■□□□□ 0.41
VCX3B-201ENST00000381029 TLR2O60603 784 aa17.62■□□□□ 0.41
VCX3B-201ENST00000381029 TAF1CQ15572 869 aaPredicted RBP17.62■□□□□ 0.41
VCX3B-201ENST00000381029 KIAA1755Q5JYT7 1200 aa17.62■□□□□ 0.41
VCX3B-201ENST00000381029 STK11IPQ8N1F8 1099 aa17.62■□□□□ 0.41
VCX3B-201ENST00000381029 ZNF296Q8WUU4 475 aaPredicted RBP17.62■□□□□ 0.41
VCX3B-201ENST00000381029 MYH8P13535 1937 aa17.62■□□□□ 0.41
VCX3B-201ENST00000381029 MPHOSPH10O00566 681 aaKnown RBP17.61■□□□□ 0.41
VCX3B-201ENST00000381029 HOXA7P31268 230 aaPredicted RBP17.61■□□□□ 0.41
VCX3B-201ENST00000381029 PTH1RQ03431 593 aa17.61■□□□□ 0.41
VCX3B-201ENST00000381029 POTEEQ6S8J3 1075 aa17.61■□□□□ 0.41
VCX3B-201ENST00000381029 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
VCX3B-201ENST00000381029 GADL1Q6ZQY3 521 aa17.61■□□□□ 0.41
VCX3B-201ENST00000381029 TBC1D10CQ8IV04 446 aa17.61■□□□□ 0.41
VCX3B-201ENST00000381029 ZFYVE28Q9HCC9 887 aa17.61■□□□□ 0.41
VCX3B-201ENST00000381029 CASP8AP2Q9UKL3 1982 aa17.6■□□□□ 0.41
VCX3B-201ENST00000381029 CYP2C8P10632 490 aa17.6■□□□□ 0.41
VCX3B-201ENST00000381029 NOVP48745 357 aa17.6■□□□□ 0.41
VCX3B-201ENST00000381029 ICA1Q05084 483 aa17.6■□□□□ 0.41
VCX3B-201ENST00000381029 USP17L2Q6R6M4 530 aa17.6■□□□□ 0.41
VCX3B-201ENST00000381029 NEDD1Q8NHV4 660 aa17.6■□□□□ 0.41
VCX3B-201ENST00000381029 KANSL2Q9H9L4 492 aa17.6■□□□□ 0.41
VCX3B-201ENST00000381029 MKNK2Q9HBH9 465 aa17.6■□□□□ 0.41
VCX3B-201ENST00000381029 TMX2Q9Y320 296 aa17.6■□□□□ 0.41
VCX3B-201ENST00000381029 LAMA4Q16363 1823 aa17.59■□□□□ 0.41
VCX3B-201ENST00000381029 BCRP11274 1271 aa17.59■□□□□ 0.41
VCX3B-201ENST00000381029 EEF2P13639 858 aaKnown RBP17.59■□□□□ 0.41
VCX3B-201ENST00000381029 HAND2P61296 217 aa17.59■□□□□ 0.41
VCX3B-201ENST00000381029 PDE4BQ07343 736 aa17.59■□□□□ 0.41
VCX3B-201ENST00000381029 STAG1Q8WVM7 1258 aa17.59■□□□□ 0.41
VCX3B-201ENST00000381029 RUFY2Q8WXA3 655 aa17.59■□□□□ 0.41
VCX3B-201ENST00000381029 ESYT1Q9BSJ8 1104 aa17.59■□□□□ 0.41
VCX3B-201ENST00000381029 ASCC2Q9H1I8 757 aaPredicted RBP17.59■□□□□ 0.41
VCX3B-201ENST00000381029 IL17RBQ9NRM6 502 aa17.59■□□□□ 0.41
VCX3B-201ENST00000381029 NYAP2Q9P242 653 aa17.59■□□□□ 0.41
VCX3B-201ENST00000381029 HTTP42858 3142 aa17.58■□□□□ 0.4
VCX3B-201ENST00000381029 VCAM1P19320 739 aa17.58■□□□□ 0.4
VCX3B-201ENST00000381029 USP14P54578 494 aa17.58■□□□□ 0.4
VCX3B-201ENST00000381029 FAM47AQ5JRC9 791 aa17.58■□□□□ 0.4
VCX3B-201ENST00000381029 MAP4K1Q92918 833 aa17.58■□□□□ 0.4
VCX3B-201ENST00000381029 PARK7Q99497 189 aaKnown RBP17.58■□□□□ 0.4
VCX3B-201ENST00000381029 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
VCX3B-201ENST00000381029 MTMR4Q9NYA4 1195 aa17.58■□□□□ 0.4
VCX3B-201ENST00000381029 NEDD4P46934 1319 aa17.57■□□□□ 0.4
VCX3B-201ENST00000381029 FKTNO75072 461 aa17.57■□□□□ 0.4
VCX3B-201ENST00000381029 SLC3A2P08195 630 aaKnown RBP17.57■□□□□ 0.4
VCX3B-201ENST00000381029 PCP11498 1178 aaKnown RBP17.57■□□□□ 0.4
VCX3B-201ENST00000381029 TFAP4Q01664 338 aa17.57■□□□□ 0.4
VCX3B-201ENST00000381029 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
VCX3B-201ENST00000381029 ZNF444Q8N0Y2 327 aaPredicted RBP17.57■□□□□ 0.4
VCX3B-201ENST00000381029 MKL1Q969V6 931 aa17.57■□□□□ 0.4
VCX3B-201ENST00000381029 CEP95Q96GE4 821 aa17.57■□□□□ 0.4
VCX3B-201ENST00000381029 LSG1Q9H089 658 aaKnown RBP17.57■□□□□ 0.4
VCX3B-201ENST00000381029 VCPKMTQ9H867 229 aa17.57■□□□□ 0.4
VCX3B-201ENST00000381029 TMOD4Q9NZQ9 345 aa17.57■□□□□ 0.4
VCX3B-201ENST00000381029 CTGFP29279 349 aa17.56■□□□□ 0.4
VCX3B-201ENST00000381029 ZYXQ15942 572 aaKnown RBP17.56■□□□□ 0.4
VCX3B-201ENST00000381029 CATSPERGQ6ZRH7 1159 aa17.56■□□□□ 0.4
VCX3B-201ENST00000381029 CPA4Q9UI42 421 aa17.56■□□□□ 0.4
VCX3B-201ENST00000381029 TAF6LQ9Y6J9 622 aa17.56■□□□□ 0.4
VCX3B-201ENST00000381029 RLFQ13129 1914 aa17.55■□□□□ 0.4
VCX3B-201ENST00000381029 SP3Q02447 781 aa17.55■□□□□ 0.4
VCX3B-201ENST00000381029 LPAR1Q92633 364 aa17.55■□□□□ 0.4
VCX3B-201ENST00000381029 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
VCX3B-201ENST00000381029 FEZ1Q99689 392 aa17.55■□□□□ 0.4
VCX3B-201ENST00000381029 ARHGEF10LQ9HCE6 1279 aa17.55■□□□□ 0.4
VCX3B-201ENST00000381029 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
VCX3B-201ENST00000381029 ZNF213O14771 459 aa17.54■□□□□ 0.4
VCX3B-201ENST00000381029 NMT2O60551 498 aa17.54■□□□□ 0.4
VCX3B-201ENST00000381029 CDC45O75419 566 aa17.54■□□□□ 0.4
VCX3B-201ENST00000381029 CYP21A2P08686 494 aa17.54■□□□□ 0.4
VCX3B-201ENST00000381029 TSPY3P0CV98 308 aa17.54■□□□□ 0.4
VCX3B-201ENST00000381029 TSPY8P0CW00 308 aa17.54■□□□□ 0.4
VCX3B-201ENST00000381029 PABPC4Q13310 644 aaKnown RBP eCLIP17.54■□□□□ 0.4
VCX3B-201ENST00000381029 LBX2Q6XYB7 198 aa17.54■□□□□ 0.4
VCX3B-201ENST00000381029 TCP11L1Q9NUJ3 509 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms