RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 RNF26Q9BY78 433 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-203ENST00000380877 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-203ENST00000380877 PCDHA7Q9UN72 937 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 CFBP00751 764 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-203ENST00000380877 NLRP12P59046 1061 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 CALCRLQ16602 461 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 PLA2G12BQ9BX93 195 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 RIPOR2Q9Y4F9 1068 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 PPP1R2P41236 205 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 NOP2P46087 812 aaKnown RBP13.8□□□□□ -0.2
GABPB1-203ENST00000380877 ICA1Q05084 483 aa13.8□□□□□ -0.2
GABPB1-203ENST00000380877 BIN2Q9UBW5 565 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-203ENST00000380877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.8□□□□□ -0.23e-6■■■■□ 21.7
GABPB1-203ENST00000380877 USP17L8P0C7I0 530 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 LIFRP42702 1097 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 GBP3Q9H0R5 595 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 TMOD4Q9NZQ9 345 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 H7C1D1 291 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 CHMP2AO43633 222 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 CMA1P23946 247 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 PRDX5P30044 214 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 USP37Q86T82 979 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 CTNND2Q9UQB3 1225 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 PAXBP1Q9Y5B6 917 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 RFX7Q2KHR2 1363 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 BACH1O14867 736 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 CETN2P41208 172 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 SCARF1Q14162 830 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 CCDC17Q96LX7 622 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 GOPCQ9HD26 462 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 DNAI1Q9UI46 699 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 GOLGA6L10A6NI86 522 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 IFNAR1P17181 557 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 INF2Q27J81 1249 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.79□□□□□ -0.24e-7■■■■■ 57.7
GABPB1-203ENST00000380877 SERTAD1Q9UHV2 236 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 SERPINB13Q9UIV8 391 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 NFE2L3Q9Y4A8 694 aa13.79□□□□□ -0.2
GABPB1-203ENST00000380877 DESP17661 470 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 PRKG1Q13976 671 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 EHBP1Q8NDI1 1231 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 CHURC1Q8WUH1 139 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 CLIC4Q9Y696 253 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 TRAF5O00463 557 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 CNNM4Q6P4Q7 775 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 SMIM5Q71RC9 77 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 ZNF34Q8IZ26 560 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 CERKQ8TCT0 537 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 UIMC1Q96RL1 719 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 RTEL1Q9NZ71 1219 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
GABPB1-203ENST00000380877 FANCCQ00597 558 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 CABP7Q86V35 215 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 LUC7L2Q9Y383 392 aaKnown RBP13.78□□□□□ -0.2
GABPB1-203ENST00000380877 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
GABPB1-203ENST00000380877 CCDC175P0C221 793 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 NFIXQ14938 502 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 NSMFQ6X4W1 530 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.78□□□□□ -0.2
GABPB1-203ENST00000380877 COA1Q9GZY4 146 aa13.78□□□□□ -0.2
GABPB1-203ENST00000380877 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.2
GABPB1-203ENST00000380877 CCDC172P0C7W6 258 aa13.77□□□□□ -0.2
GABPB1-203ENST00000380877 TXNRD1Q16881 649 aa13.77□□□□□ -0.2
GABPB1-203ENST00000380877 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.2
GABPB1-203ENST00000380877 KIFC2Q96AC6 838 aa13.77□□□□□ -0.2
GABPB1-203ENST00000380877 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.2
GABPB1-203ENST00000380877 RPAP1Q9BWH6 1393 aaPredicted RBP13.77□□□□□ -0.2
GABPB1-203ENST00000380877 TMCO5BA8MYB1 307 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 PNOCQ13519 176 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 SLFN13Q68D06 897 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 NCAPH2Q6IBW4 605 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 DYNLL2Q96FJ2 89 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 TCHPQ9BT92 498 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 SPATA31A7Q8IWB4 1347 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 SYNRGQ9UMZ2 1314 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 ZNF75DP51815 510 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 GALNT17Q6IS24 598 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 MASTLQ96GX5 879 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 CLIC6Q96NY7 704 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 VPS16Q9H269 839 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.21
GABPB1-203ENST00000380877 FAM193AP78312 1265 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 PAK1Q13153 545 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 TOB2Q14106 344 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-203ENST00000380877 BRIP1Q9BX63 1249 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 ZSWIM4Q9H7M6 989 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 JADE2Q9NQC1 790 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
GABPB1-203ENST00000380877 SLC39A14Q15043 492 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 ABCB5Q2M3G0 1257 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 NEK11Q8NG66 645 aa13.76□□□□□ -0.21
GABPB1-203ENST00000380877 CCDC42Q96M95 316 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms