RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 AGTPBP1Q9UPW5 1226 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 B4E1Z4 1266 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 PPEF1O14829 653 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 A1BGP04217 495 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 PPP1R7Q15435 360 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 SLC9C1Q4G0N8 1177 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 RAB11FIP4Q86YS3 637 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 PHACTR3Q96KR7 559 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 CUEDC2Q9H467 287 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 V9GY48 417 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 KRT5P13647 590 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 SYT1P21579 422 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 NFKBIAP25963 317 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 TFAP4Q01664 338 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 PPARAQ07869 468 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 CERKLQ49MI3 558 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 ARHGEF16Q5VV41 709 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 TEKT3Q9BXF9 490 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 ARFGAP3Q9NP61 516 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 AATFQ9NY61 560 aaKnown RBP eCLIP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 CLASP1Q7Z460 1538 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 VWA3AA6NCI4 1184 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 ZBTB7BO15156 539 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 SPOPO43791 374 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 EXOC3O60645 756 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 SKILP12757 684 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 NPR1P16066 1061 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 SARNPP82979 210 aaKnown RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 ICA1Q05084 483 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 TBC1D8BQ0IIM8 1120 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 ASIC2Q16515 512 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 ANO6Q4KMQ2 910 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 MUM1L1Q5H9M0 696 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 NCAPH2Q6IBW4 605 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 SND1Q7KZF4 910 aaKnown RBP eCLIP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 PSDA5PKW4 1024 aaPredicted RBP7.96□□□□□ -1.13
CCDC171-201ENST00000380701 CCNT1O60563 726 aaKnown RBP7.96□□□□□ -1.13
CCDC171-201ENST00000380701 FAM160B2Q86V87 743 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 FBXO11Q86XK2 927 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 BBS5Q8N3I7 341 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 CCDC51Q96ER9 411 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 ZNF274Q96GC6 653 aaPredicted RBP7.96□□□□□ -1.13
CCDC171-201ENST00000380701 KCNH3Q9ULD8 1083 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 PTPRTO14522 1441 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 ATP8B3O60423 1300 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 SGSM2O43147 1006 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 TRAPPC10P48553 1259 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 BPIFB4P59827 614 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 DCAF17Q5H9S7 520 aaPredicted RBP7.96□□□□□ -1.13
CCDC171-201ENST00000380701 RETREG2Q8NC44 543 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 LRRC2Q9BYS8 371 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 CALCOCO1Q9P1Z2 691 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 CNPY2Q9Y2B0 182 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 UGGT1Q9NYU2 1555 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 ZNF532Q9HCE3 1301 aa7.96□□□□□ -1.13
CCDC171-201ENST00000380701 SLC27A2O14975 620 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 SP4Q02446 784 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 ZNF365Q70YC5 407 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 AOPEPQ8N6M6 819 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 LEO1Q8WVC0 666 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-201ENST00000380701 HAUS7Q99871 368 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 ZNF804BA4D1E1 1349 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 TYW5A2RUC4 315 aaKnown RBP7.96□□□□□ -1.14
CCDC171-201ENST00000380701 AKR1B15C9JRZ8 316 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-201ENST00000380701 RIOK3O14730 519 aaKnown RBP7.96□□□□□ -1.14
CCDC171-201ENST00000380701 CFBP00751 764 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 EVCP57679 992 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 PAK1Q13153 545 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 DALRD3Q5D0E6 543 aaKnown RBP7.96□□□□□ -1.14
CCDC171-201ENST00000380701 CFAP157Q5JU67 520 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 ANKRD35Q8N283 1001 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 PLCD4Q9BRC7 762 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 CARD14Q9BXL6 1004 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 TRIM7Q9C029 511 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 NCAPD2Q15021 1401 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 ZNF233A6NK53 670 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 PTPREP23469 700 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 TYRO3Q06418 890 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 HERC4Q5GLZ8 1057 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-201ENST00000380701 PIK3AP1Q6ZUJ8 805 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 NACC1Q96RE7 527 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 KANSL2Q9H9L4 492 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 HESX1Q9UBX0 185 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 FBXO40Q9UH90 709 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 PCDHB15Q9Y5E8 787 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 MYOM2P54296 1465 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 ABCA8O94911 1581 aa7.96□□□□□ -1.14
CCDC171-201ENST00000380701 HSPA4P34932 840 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 TIMM10P62072 90 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 DPH6Q7L8W6 267 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 MAPKAPK5Q8IW41 473 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 CPXCR1Q8N123 301 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 CCDC63Q8NA47 563 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 TGFBRAP1Q8WUH2 860 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 CSRNP1Q96S65 589 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 AMNQ9BXJ7 453 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 WDR11Q9BZH6 1224 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 PFDN4Q9NQP4 134 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 PZPP20742 1482 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms