RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 MXD3Q9BW11 206 aa13.85□□□□□ -0.19
USP3-202ENST00000380324 FOXP1Q9H334 677 aaPredicted RBP13.85□□□□□ -0.19
USP3-202ENST00000380324 XBP1P17861 261 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 ALDH1B1P30837 517 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 TOB1P50616 345 aaPredicted RBP13.84□□□□□ -0.19
USP3-202ENST00000380324 C11orf57Q6ZUT1 292 aaPredicted RBP13.84□□□□□ -0.19
USP3-202ENST00000380324 SRBD1Q8N5C6 995 aaKnown RBP13.84□□□□□ -0.19
USP3-202ENST00000380324 MASTLQ96GX5 879 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 ANO8Q9HCE9 1232 aaPredicted RBP13.84□□□□□ -0.19
USP3-202ENST00000380324 CCDC39Q9UFE4 941 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 STX8Q9UNK0 236 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 DAGLAQ9Y4D2 1042 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 MYH8P13535 1937 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 SNED1Q8TER0 1413 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 GAKO14976 1311 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 FAM205AQ6ZU69 1335 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 FAM205CA6NFA0 338 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 PRPF3O43395 683 aaKnown RBP13.84□□□□□ -0.19
USP3-202ENST00000380324 PLCG2P16885 1265 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 CLCN1P35523 988 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 RHBDL3P58872 404 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 PICALMQ13492 652 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 STX1AQ16623 288 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 SLF2Q8IX21 1173 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 ZNF444Q8N0Y2 327 aaPredicted RBP13.84□□□□□ -0.19
USP3-202ENST00000380324 PNMA1Q8ND90 353 aa13.84□□□□□ -0.19
USP3-202ENST00000380324 TMX4Q9H1E5 349 aaPredicted RBP13.84□□□□□ -0.19
USP3-202ENST00000380324 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
USP3-202ENST00000380324 RGPD3A6NKT7 1758 aaPredicted RBP13.83□□□□□ -0.19
USP3-202ENST00000380324 RGPD4Q7Z3J3 1758 aa13.83□□□□□ -0.19
USP3-202ENST00000380324 G3V3G9 751 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 PPP6R2O75170 966 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 ZNF202O95125 648 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 CMA1P23946 247 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 HS1BP3Q53T59 392 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 DCAF8Q5TAQ9 597 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 SHC4Q6S5L8 630 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 CERS3Q8IU89 383 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 CERS5Q8N5B7 392 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 CABP5Q9NP86 173 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 SLX4Q8IY92 1834 aa13.83□□□□□ -0.2
USP3-202ENST00000380324 RASA1P20936 1047 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 RILPL1Q5EBL4 403 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 SPECC1Q5M775 1068 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 TTF2Q9UNY4 1162 aaKnown RBP13.82□□□□□ -0.2
USP3-202ENST00000380324 PCDHB6Q9Y5E3 794 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 QSER1Q2KHR3 1735 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 KRT2P35908 639 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 SCNN1DP51172 638 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 RASGRP2Q7LDG7 609 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 C2CD5Q86YS7 1000 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 PHF20Q9BVI0 1012 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 DBNDD1Q9H9R9 158 aa13.82□□□□□ -0.2
USP3-202ENST00000380324 KIF5BP33176 963 aa13.81□□□□□ -0.2
USP3-202ENST00000380324 SYKP43405 635 aa13.81□□□□□ -0.2
USP3-202ENST00000380324 STAG2Q8N3U4 1231 aa13.81□□□□□ -0.2
USP3-202ENST00000380324 NOL7Q9UMY1 257 aaKnown RBP13.81□□□□□ -0.2
USP3-202ENST00000380324 CDK8P49336 464 aa13.81□□□□□ -0.2
USP3-202ENST00000380324 EN1Q05925 392 aaPredicted RBP13.81□□□□□ -0.2
USP3-202ENST00000380324 EZH2Q15910 746 aaKnown RBP13.81□□□□□ -0.2
USP3-202ENST00000380324 EARS2Q5JPH6 523 aaKnown RBP13.81□□□□□ -0.2
USP3-202ENST00000380324 C16orf86Q6ZW13 317 aa13.81□□□□□ -0.2
USP3-202ENST00000380324 DGKHQ86XP1 1220 aa13.81□□□□□ -0.2
USP3-202ENST00000380324 EYA3Q99504 573 aa13.81□□□□□ -0.2
USP3-202ENST00000380324 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.81□□□□□ -0.2
USP3-202ENST00000380324 ZKSCAN5Q9Y2L8 839 aa13.81□□□□□ -0.2
USP3-202ENST00000380324 SCN9AQ15858 1988 aa13.81□□□□□ -0.2
USP3-202ENST00000380324 BIN1O00499 593 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 SCG2P13521 617 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 VEGFAP15692 232 aaPredicted RBP13.8□□□□□ -0.2
USP3-202ENST00000380324 CHRNA5P30532 468 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 GRIN1Q05586 938 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 ZRSR1Q15695 479 aaKnown RBP13.8□□□□□ -0.2
USP3-202ENST00000380324 NOM1Q5C9Z4 860 aaKnown RBP13.8□□□□□ -0.2
USP3-202ENST00000380324 KRI1Q8N9T8 703 aaKnown RBP13.8□□□□□ -0.2
USP3-202ENST00000380324 SPC24Q8NBT2 197 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 FAM163AQ96GL9 167 aaPredicted RBP13.8□□□□□ -0.2
USP3-202ENST00000380324 ZNF287Q9HBT7 754 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.8□□□□□ -0.2
USP3-202ENST00000380324 CUTAO60888 179 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 RESP18Q5W5W9 173 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 GPKOWQ92917 476 aaPredicted RBP eCLIP13.8□□□□□ -0.2
USP3-202ENST00000380324 ANO10Q9NW15 660 aa13.8□□□□□ -0.2
USP3-202ENST00000380324 H0YIN7 160 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 ZNF830Q96NB3 372 aaPredicted RBP13.79□□□□□ -0.2
USP3-202ENST00000380324 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 KCNQ5Q9NR82 932 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 HPSEQ9Y251 543 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
USP3-202ENST00000380324 GOLGA6L19H0YKK7 550 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 GOLGA8HP0CJ92 632 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 NPY5RQ15761 445 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
USP3-202ENST00000380324 DPCR1Q3MIW9 517 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 CEP57L1Q8IYX8 460 aa13.79□□□□□ -0.2
USP3-202ENST00000380324 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms