RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 UBXN2AP68543 259 aa28.66■■■□□ 2.18
CDKN2A-203ENST00000380151 IRF5Q13568 498 aa28.66■■■□□ 2.18
CDKN2A-203ENST00000380151 KIAA1683Q9H0B3 1180 aa28.66■■■□□ 2.18
CDKN2A-203ENST00000380151 CCL5P13501 91 aa28.65■■■□□ 2.18
CDKN2A-203ENST00000380151 USP14P54578 494 aa28.65■■■□□ 2.18
CDKN2A-203ENST00000380151 OTUD7AQ8TE49 926 aaPredicted RBP28.65■■■□□ 2.18
CDKN2A-203ENST00000380151 DDRGK1Q96HY6 314 aa28.65■■■□□ 2.18
CDKN2A-203ENST00000380151 SWAP70Q9UH65 585 aa28.65■■■□□ 2.18
CDKN2A-203ENST00000380151 DOCK3Q8IZD9 2030 aa28.65■■■□□ 2.18
CDKN2A-203ENST00000380151 VCAM1P19320 739 aa28.64■■■□□ 2.18
CDKN2A-203ENST00000380151 SHISA4Q96DD7 197 aa28.64■■■□□ 2.18
CDKN2A-203ENST00000380151 USP17L12C9JPN9 530 aa28.63■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L21D6R901 530 aa28.63■■■□□ 2.17
CDKN2A-203ENST00000380151 INHAP05111 366 aa28.63■■■□□ 2.17
CDKN2A-203ENST00000380151 C12orf60Q5U649 245 aa28.63■■■□□ 2.17
CDKN2A-203ENST00000380151 AMOTL1Q8IY63 956 aa28.63■■■□□ 2.17
CDKN2A-203ENST00000380151 GPRC5AQ8NFJ5 357 aa28.63■■■□□ 2.17
CDKN2A-203ENST00000380151 PXYLP1Q8TE99 480 aa28.63■■■□□ 2.17
CDKN2A-203ENST00000380151 PAGR1Q9BTK6 254 aa28.63■■■□□ 2.17
CDKN2A-203ENST00000380151 RNF208Q9H0X6 261 aa28.63■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L15C9J2P7 530 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L13C9JLJ4 530 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L11C9JVI0 530 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L18D6R9N7 530 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L22D6RA61 530 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L17D6RBQ6 530 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L19D6RCP7 530 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L20D6RJB6 530 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 USP17L24Q0WX57 530 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 GTF3C2Q8WUA4 911 aaPredicted RBP28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 UNC93B1Q9H1C4 597 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 RBPJLQ9UBG7 517 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 TTC41PQ6P2S7 1318 aa28.62■■■□□ 2.17
CDKN2A-203ENST00000380151 AKR1B1P15121 316 aa28.61■■■□□ 2.17
CDKN2A-203ENST00000380151 POTEEQ6S8J3 1075 aa28.61■■■□□ 2.17
CDKN2A-203ENST00000380151 TMEM179Q6ZVK1 233 aa28.61■■■□□ 2.17
CDKN2A-203ENST00000380151 CLEC10AQ8IUN9 316 aa28.61■■■□□ 2.17
CDKN2A-203ENST00000380151 APPBP2Q92624 585 aa28.61■■■□□ 2.17
CDKN2A-203ENST00000380151 OSBP2Q969R2 916 aa28.61■■■□□ 2.17
CDKN2A-203ENST00000380151 STRBPQ96SI9 672 aaKnown RBP28.61■■■□□ 2.17
CDKN2A-203ENST00000380151 MYH8P13535 1937 aa28.61■■■□□ 2.17
CDKN2A-203ENST00000380151 A0A1W2PRG0 241 aa28.6■■■□□ 2.17
CDKN2A-203ENST00000380151 RNF113AO15541 343 aaKnown RBP28.6■■■□□ 2.17
CDKN2A-203ENST00000380151 ERVK-9P63128 1117 aa28.6■■■□□ 2.17
CDKN2A-203ENST00000380151 ERVK-24P63145 666 aa28.6■■■□□ 2.17
CDKN2A-203ENST00000380151 PI4K2BQ8TCG2 481 aa28.6■■■□□ 2.17
CDKN2A-203ENST00000380151 ERC2O15083 957 aa28.59■■■□□ 2.17
CDKN2A-203ENST00000380151 GJB1P08034 283 aa28.59■■■□□ 2.17
CDKN2A-203ENST00000380151 CDK8P49336 464 aa28.59■■■□□ 2.17
CDKN2A-203ENST00000380151 CTR9Q6PD62 1173 aa28.59■■■□□ 2.17
CDKN2A-203ENST00000380151 CATSPERGQ6ZRH7 1159 aa28.59■■■□□ 2.17
CDKN2A-203ENST00000380151 C16orf86Q6ZW13 317 aa28.59■■■□□ 2.17
CDKN2A-203ENST00000380151 RPAP3Q9H6T3 665 aaPredicted RBP28.59■■■□□ 2.17
CDKN2A-203ENST00000380151 GJD2Q9UKL4 321 aa28.59■■■□□ 2.17
CDKN2A-203ENST00000380151 MX1P20591 662 aa28.58■■■□□ 2.17
CDKN2A-203ENST00000380151 Q3C1V9 767 aa28.58■■■□□ 2.17
CDKN2A-203ENST00000380151 NKX2-3Q8TAU0 364 aa28.58■■■□□ 2.17
CDKN2A-203ENST00000380151 PORCNQ9H237 461 aa28.58■■■□□ 2.17
CDKN2A-203ENST00000380151 ARPP21Q9UBL0 812 aaPredicted RBP28.58■■■□□ 2.17
CDKN2A-203ENST00000380151 GLRX3O76003 335 aaKnown RBP28.57■■■□□ 2.16
CDKN2A-203ENST00000380151 ZFYP08048 801 aaPredicted RBP28.57■■■□□ 2.16
CDKN2A-203ENST00000380151 GJA8P48165 433 aa28.57■■■□□ 2.16
CDKN2A-203ENST00000380151 ICA1Q05084 483 aa28.57■■■□□ 2.16
CDKN2A-203ENST00000380151 PLXNB2O15031 1838 aa28.57■■■□□ 2.16
CDKN2A-203ENST00000380151 M0R2C6 588 aa28.56■■■□□ 2.16
CDKN2A-203ENST00000380151 GPAA1O43292 621 aa28.56■■■□□ 2.16
CDKN2A-203ENST00000380151 CNMDO75829 334 aa28.56■■■□□ 2.16
CDKN2A-203ENST00000380151 MAPK4P31152 587 aa28.56■■■□□ 2.16
CDKN2A-203ENST00000380151 CCAR1Q8IX12 1150 aaKnown RBP28.56■■■□□ 2.16
CDKN2A-203ENST00000380151 GSG1L2A8MUP6 293 aa28.55■■■□□ 2.16
CDKN2A-203ENST00000380151 ANKRD45Q5TZF3 282 aa28.55■■■□□ 2.16
CDKN2A-203ENST00000380151 U2AF1L4Q8WU68 220 aaKnown RBP28.55■■■□□ 2.16
CDKN2A-203ENST00000380151 CCDC17Q96LX7 622 aa28.55■■■□□ 2.16
CDKN2A-203ENST00000380151 FSD1Q9BTV5 496 aa28.55■■■□□ 2.16
CDKN2A-203ENST00000380151 ZBTB47Q9UFB7 747 aaPredicted RBP28.55■■■□□ 2.16
CDKN2A-203ENST00000380151 RABGAP1Q9Y3P9 1069 aa28.55■■■□□ 2.16
CDKN2A-203ENST00000380151 SALL3Q9BXA9 1300 aa28.54■■■□□ 2.16
CDKN2A-203ENST00000380151 SPDYE16A6NNV3 312 aaPredicted RBP28.54■■■□□ 2.16
CDKN2A-203ENST00000380151 HMGCRP04035 888 aa28.54■■■□□ 2.16
CDKN2A-203ENST00000380151 CYP2B6P20813 491 aa28.54■■■□□ 2.16
CDKN2A-203ENST00000380151 HDAC1Q13547 482 aaPredicted RBP28.54■■■□□ 2.16
CDKN2A-203ENST00000380151 SOCS4Q8WXH5 440 aa28.54■■■□□ 2.16
CDKN2A-203ENST00000380151 ARHGEF10LQ9HCE6 1279 aa28.54■■■□□ 2.16
CDKN2A-203ENST00000380151 EPB41L4AQ9HCS5 686 aaPredicted RBP28.54■■■□□ 2.16
CDKN2A-203ENST00000380151 LRRFIP1Q32MZ4 808 aaKnown RBP28.53■■■□□ 2.16
CDKN2A-203ENST00000380151 KIAA1755Q5JYT7 1200 aa28.53■■■□□ 2.16
CDKN2A-203ENST00000380151 GPR142Q7Z601 462 aa28.53■■■□□ 2.16
CDKN2A-203ENST00000380151 SIAH1Q8IUQ4 282 aa28.53■■■□□ 2.16
CDKN2A-203ENST00000380151 NUDT12Q9BQG2 462 aa28.53■■■□□ 2.16
CDKN2A-203ENST00000380151 TANGO6Q9C0B7 1094 aa28.53■■■□□ 2.16
CDKN2A-203ENST00000380151 TRIM32Q13049 653 aa28.52■■■□□ 2.16
CDKN2A-203ENST00000380151 SBK1Q52WX2 424 aa28.52■■■□□ 2.16
CDKN2A-203ENST00000380151 GIMAP6Q6P9H5 292 aa28.52■■■□□ 2.16
CDKN2A-203ENST00000380151 LBX2Q6XYB7 198 aa28.52■■■□□ 2.16
CDKN2A-203ENST00000380151 STK11IPQ8N1F8 1099 aa28.52■■■□□ 2.16
CDKN2A-203ENST00000380151 TRIB2Q92519 343 aa28.52■■■□□ 2.16
CDKN2A-203ENST00000380151 GCC1Q96CN9 775 aa28.52■■■□□ 2.16
CDKN2A-203ENST00000380151 DEFB118Q96PH6 123 aa28.52■■■□□ 2.16
CDKN2A-203ENST00000380151 CWC22Q9HCG8 908 aaKnown RBP28.52■■■□□ 2.16
CDKN2A-203ENST00000380151 BTBD7Q9P203 1132 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms