RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 UBE4AQ14139 1066 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 CATIPQ7Z7H3 387 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 SPATA20Q8TB22 786 aa13.89□□□□□ -0.19
RFC3-201ENST00000380071 BSDC1Q9NW68 430 aaPredicted RBP13.89□□□□□ -0.19
RFC3-201ENST00000380071 CACNA1SQ13698 1873 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 USP17L12C9JPN9 530 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 USP17L21D6R901 530 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 NMT2O60551 498 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 IGSF3O75054 1194 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 ZNF174Q15697 407 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 XBP1P17861 261 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 PPP2R5BQ15173 497 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 KANK3Q6NY19 840 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 FAM177A1Q8N128 213 aaPredicted RBP13.88□□□□□ -0.19
RFC3-201ENST00000380071 TC2NQ8N9U0 490 aa13.88□□□□□ -0.19
RFC3-201ENST00000380071 GTPBP4Q9BZE4 634 aaKnown RBP13.88□□□□□ -0.19
RFC3-201ENST00000380071 AATFQ9NY61 560 aaKnown RBP eCLIP13.88□□□□□ -0.19
RFC3-201ENST00000380071 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.88□□□□□ -0.19
RFC3-201ENST00000380071 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
RFC3-201ENST00000380071 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
RFC3-201ENST00000380071 NPY5RQ15761 445 aa13.87□□□□□ -0.19
RFC3-201ENST00000380071 FAM47AQ5JRC9 791 aa13.87□□□□□ -0.19
RFC3-201ENST00000380071 IQCA1Q86XH1 822 aa13.87□□□□□ -0.19
RFC3-201ENST00000380071 TRIML1Q8N9V2 468 aa13.87□□□□□ -0.19
RFC3-201ENST00000380071 SYMPKQ92797 1274 aaKnown RBP13.87□□□□□ -0.19
RFC3-201ENST00000380071 PAGE5Q96GU1 130 aa13.87□□□□□ -0.19
RFC3-201ENST00000380071 BAG1Q99933 345 aaPredicted RBP13.87□□□□□ -0.19
RFC3-201ENST00000380071 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
RFC3-201ENST00000380071 BRIP1Q9BX63 1249 aa13.87□□□□□ -0.19
RFC3-201ENST00000380071 DACH1Q9UI36 760 aa13.87□□□□□ -0.19
RFC3-201ENST00000380071 ZNF652Q9Y2D9 606 aa13.87□□□□□ -0.19
RFC3-201ENST00000380071 MORC2Q9Y6X9 1032 aaPredicted RBP13.87□□□□□ -0.19
RFC3-201ENST00000380071 BAZ2BQ9UIF8 2168 aaKnown RBP13.87□□□□□ -0.19
RFC3-201ENST00000380071 WNK3Q9BYP7 1800 aa13.87□□□□□ -0.19
RFC3-201ENST00000380071 VWA3AA6NCI4 1184 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 CCP110O43303 1012 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 TUBB4AP04350 444 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 FGRP09769 529 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 VEGFAP15692 232 aaPredicted RBP13.86□□□□□ -0.19
RFC3-201ENST00000380071 STX17P56962 302 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 SPECC1LQ69YQ0 1117 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 PPP2R2CQ9Y2T4 447 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 ADAMTS3O15072 1205 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 ARHGAP6O43182 974 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 TEX33O43247 280 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 PLCD1P51178 756 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 NR1I3Q14994 352 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 KLHL10Q6JEL2 608 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 TOGARAM2Q6ZUX3 1019 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 NUTM2AQ8IVF1 878 aaPredicted RBP13.86□□□□□ -0.19
RFC3-201ENST00000380071 SMYD4Q8IYR2 804 aaPredicted RBP13.86□□□□□ -0.19
RFC3-201ENST00000380071 SRBD1Q8N5C6 995 aaKnown RBP13.86□□□□□ -0.19
RFC3-201ENST00000380071 STAMQ92783 540 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 NSUN4Q96CB9 384 aaKnown RBP13.86□□□□□ -0.19
RFC3-201ENST00000380071 TFCP2L1Q9NZI6 479 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 DUOX1Q9NRD9 1551 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 PHLPP2Q6ZVD8 1323 aa13.86□□□□□ -0.19
RFC3-201ENST00000380071 SLFN14P0C7P3 912 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 MECOMQ03112 1051 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 CLEC4GQ6UXB4 293 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 SH3RF1Q7Z6J0 888 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 LINC00116Q8NCU8 138 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 TNFRSF25Q93038 417 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
RFC3-201ENST00000380071 ZNF446Q9NWS9 450 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 LAMB2P55268 1798 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 URI1O94763 535 aaPredicted RBP13.85□□□□□ -0.19
RFC3-201ENST00000380071 CYP2D6P10635 497 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
RFC3-201ENST00000380071 TMTC3Q6ZXV5 915 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 FBXO33Q7Z6M2 555 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 CCDC24Q8N4L8 307 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 THRAP3Q9Y2W1 955 aaKnown RBP13.85□□□□□ -0.19
RFC3-201ENST00000380071 RREB1Q92766 1687 aa13.85□□□□□ -0.19
RFC3-201ENST00000380071 ZSCAN12O43309 604 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 COBLO75128 1261 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 ERCC5P28715 1186 aaPredicted RBP13.84□□□□□ -0.19
RFC3-201ENST00000380071 PTGDRQ13258 359 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 SLC4A8Q2Y0W8 1093 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 APTXQ7Z2E3 356 aaKnown RBP13.84□□□□□ -0.19
RFC3-201ENST00000380071 FCHSD1Q86WN1 690 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 JAG2Q9Y219 1238 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 STX10O60499 249 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 DPYDQ12882 1025 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 TTC38Q5R3I4 469 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 DCP1AQ9NPI6 582 aaPredicted RBP13.84□□□□□ -0.19
RFC3-201ENST00000380071 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
RFC3-201ENST00000380071 PARP3Q9Y6F1 533 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 CNTNAP5Q8WYK1 1306 aa13.84□□□□□ -0.19
RFC3-201ENST00000380071 A0A1B0GTH6 734 aa13.83□□□□□ -0.19
RFC3-201ENST00000380071 CALM1P0DP23 149 aa13.83□□□□□ -0.19
RFC3-201ENST00000380071 CALM2P0DP24 149 aa13.83□□□□□ -0.19
RFC3-201ENST00000380071 CALM3P0DP25 149 aa13.83□□□□□ -0.19
RFC3-201ENST00000380071 H2AFXP16104 143 aaPredicted RBP13.83□□□□□ -0.19
RFC3-201ENST00000380071 PRDX5P30044 214 aa13.83□□□□□ -0.19
RFC3-201ENST00000380071 CUL4BQ13620 913 aa13.83□□□□□ -0.19
RFC3-201ENST00000380071 MTF1Q14872 753 aa13.83□□□□□ -0.19
RFC3-201ENST00000380071 FERMT2Q96AC1 680 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms