RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 C9orf131Q5VYM1 1079 aa8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 RSRC2Q7L4I2 434 aaKnown RBP8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 RNF216Q9NWF9 866 aaPredicted RBP8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 DUSP10Q9Y6W6 482 aa8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 GLTPD2A6NH11 291 aa8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 IRS4O14654 1257 aaPredicted RBP8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 ZNF202O95125 648 aa8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 IARSP41252 1262 aaKnown RBP8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 OS9Q13438 667 aaPredicted RBP8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 TNIP1Q15025 636 aa8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 REXO2Q9Y3B8 237 aaKnown RBP8.49□□□□□ -1.05
GPCPD1-201ENST00000379019 ME1P48163 572 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 RASGRP2Q7LDG7 609 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 GPBP1L1Q9HC44 474 aaPredicted RBP8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 SMARCAL1Q9NZC9 954 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 LTBP1Q14766 1721 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 PFKFB2O60825 505 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 MCCP23508 829 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 EIF6P56537 245 aaKnown RBP8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 FKBP1AP62942 108 aaKnown RBP8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 NR5A1Q13285 461 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 JDP2Q8WYK2 163 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 C9orf78Q9NZ63 289 aaPredicted RBP8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 LEMD3Q9Y2U8 911 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 MYO3BQ8WXR4 1341 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 SRGAP2O75044 1071 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 OAS2P29728 719 aaKnown RBP8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 CHRNA5P30532 468 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 ZNF784Q8NCA9 323 aaPredicted RBP8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 MTERF4Q7Z6M4 381 aaKnown RBP8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 PNMA8AQ86V59 439 aaPredicted RBP8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 RNF181Q9P0P0 153 aa8.48□□□□□ -1.05
GPCPD1-201ENST00000379019 SLU7O95391 586 aaKnown RBP8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 CTSWP56202 376 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 TBX2Q13207 712 aaPredicted RBP8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 SART3Q15020 963 aaKnown RBP8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 C10orf67Q8IYJ2 551 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 EHD2Q9NZN4 543 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 PCDHA5Q9Y5H7 936 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 FGAP02671 866 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 FXR1P51114 621 aaKnown RBP eCLIP8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 FANCCQ00597 558 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 NTRK3Q16288 839 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 KRBA2Q6ZNG9 492 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 GPC2Q8N158 579 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 HDAC7Q8WUI4 952 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 ADAM21Q9UKJ8 722 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 HPSEQ9Y251 543 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 CSF1RP07333 972 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 VSNL1P62760 191 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 SLC9C2Q5TAH2 1124 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 SMC1BQ8NDV3 1235 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 PUF60Q9UHX1 559 aaKnown RBP8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 FAM170AA1A519 330 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 FAM160A1Q05DH4 1040 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 SMIM5Q71RC9 77 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 NIM1KQ8IY84 436 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 BSDC1Q9NW68 430 aaPredicted RBP8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 FZD9O00144 591 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 ANKRD18AQ8IVF6 992 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 ACRBPQ8NEB7 543 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 SH2B1Q9NRF2 756 aaPredicted RBP8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 SLX4Q8IY92 1834 aa8.47□□□□□ -1.05
GPCPD1-201ENST00000379019 COL1A1P02452 1464 aaPredicted RBP8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 XDHP47989 1333 aa8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 TOMM70O94826 608 aa8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 SMC2O95347 1197 aa8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 CDC25BP30305 580 aa8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 IGHMBP2P38935 993 aaKnown RBP8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 TRADDQ15628 312 aa8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 TMED8Q6PL24 325 aaPredicted RBP8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 LMBR1LQ6UX01 489 aa8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 ZKSCAN3Q9BRR0 538 aa8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 SPEF2Q9C093 1822 aa8.46□□□□□ -1.05
GPCPD1-201ENST00000379019 RASSF10A6NK89 507 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 NFKBIEO00221 500 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 MAP3K9P80192 1104 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 PDE4CQ08493 712 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 SF3A1Q15459 793 aaKnown RBP8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 NCAPH2Q6IBW4 605 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 ERO1AQ96HE7 468 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 ETF1P62495 437 aaKnown RBP8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 KCND1Q9NSA2 647 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 KCNJ14Q9UNX9 436 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 PDE2AO00408 941 aaPredicted RBP8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 RPS8P62241 208 aaKnown RBP8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 ERVK-24P63145 666 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 GABPB1Q06547 395 aaPredicted RBP8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 DNAAF5Q86Y56 855 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 RGS22Q8NE09 1264 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 PDE11AQ9HCR9 933 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 LZTFL1Q9NQ48 299 aa8.46□□□□□ -1.06
GPCPD1-201ENST00000379019 PSME4Q14997 1843 aa8.45□□□□□ -1.06
GPCPD1-201ENST00000379019 GPTP24298 496 aa8.45□□□□□ -1.06
GPCPD1-201ENST00000379019 KIF23Q02241 960 aaPredicted RBP8.45□□□□□ -1.06
GPCPD1-201ENST00000379019 TTC19Q6DKK2 380 aaPredicted RBP8.45□□□□□ -1.06
GPCPD1-201ENST00000379019 SCAND2PQ9GZW5 306 aaPredicted RBP8.45□□□□□ -1.06
GPCPD1-201ENST00000379019 AGPSO00116 658 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms