RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 GPRC5AQ8NFJ5 357 aa22.82■■□□□ 1.24
TMEM88B-201ENST00000378821 UNC93B1Q9H1C4 597 aa22.82■■□□□ 1.24
TMEM88B-201ENST00000378821 ARMT1Q9H993 441 aa22.82■■□□□ 1.24
TMEM88B-201ENST00000378821 CABP5Q9NP86 173 aa22.82■■□□□ 1.24
TMEM88B-201ENST00000378821 ECHDC1Q9NTX5 307 aa22.82■■□□□ 1.24
TMEM88B-201ENST00000378821 INHAP05111 366 aa22.81■■□□□ 1.24
TMEM88B-201ENST00000378821 ACER1Q8TDN7 264 aa22.81■■□□□ 1.24
TMEM88B-201ENST00000378821 PAK6Q9NQU5 681 aaPredicted RBP22.81■■□□□ 1.24
TMEM88B-201ENST00000378821 USP17L15C9J2P7 530 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 USP17L13C9JLJ4 530 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 USP17L11C9JVI0 530 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 USP17L18D6R9N7 530 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 USP17L22D6RA61 530 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 USP17L17D6RBQ6 530 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 USP17L19D6RCP7 530 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 USP17L20D6RJB6 530 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 MBD4O95243 580 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 SGPL1O95470 568 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 USP17L24Q0WX57 530 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 RAB3GAP1Q15042 981 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 LBX2Q6XYB7 198 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 CATSPERGQ6ZRH7 1159 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 SWAP70Q9UH65 585 aa22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 BAZ2AQ9UIF9 1905 aaKnown RBP22.8■■□□□ 1.24
TMEM88B-201ENST00000378821 PRKAB2O43741 272 aa22.79■■□□□ 1.24
TMEM88B-201ENST00000378821 CHGBP05060 677 aa22.79■■□□□ 1.24
TMEM88B-201ENST00000378821 Q3C1V9 767 aa22.79■■□□□ 1.24
TMEM88B-201ENST00000378821 ZSCAN25Q6NSZ9 544 aa22.79■■□□□ 1.24
TMEM88B-201ENST00000378821 U2AF1L4Q8WU68 220 aaKnown RBP22.79■■□□□ 1.24
TMEM88B-201ENST00000378821 GCC1Q96CN9 775 aa22.79■■□□□ 1.24
TMEM88B-201ENST00000378821 PEX10O60683 326 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 CYP2D6P10635 497 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 XRCC5P13010 732 aaKnown RBP22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 MAPK4P31152 587 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 ERVK-9P63128 1117 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 ERVK-24P63145 666 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 SEPT2Q15019 361 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 C12orf60Q5U649 245 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 USP6NLQ92738 828 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 FEZ1Q99689 392 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 CRISPLD2Q9H0B8 497 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 RABGAP1Q9Y3P9 1069 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 MYH8P13535 1937 aa22.78■■□□□ 1.24
TMEM88B-201ENST00000378821 VCAM1P19320 739 aa22.77■■□□□ 1.24
TMEM88B-201ENST00000378821 PUS7LQ9H0K6 701 aaKnown RBP22.77■■□□□ 1.24
TMEM88B-201ENST00000378821 A0A1W2PRG0 241 aa22.76■■□□□ 1.23
TMEM88B-201ENST00000378821 CNMDO75829 334 aa22.76■■□□□ 1.23
TMEM88B-201ENST00000378821 HMGCRP04035 888 aa22.76■■□□□ 1.23
TMEM88B-201ENST00000378821 TMEM179Q6ZVK1 233 aa22.76■■□□□ 1.23
TMEM88B-201ENST00000378821 KBTBD3Q8NAB2 608 aa22.76■■□□□ 1.23
TMEM88B-201ENST00000378821 SOCS4Q8WXH5 440 aa22.76■■□□□ 1.23
TMEM88B-201ENST00000378821 RLFQ13129 1914 aa22.75■■□□□ 1.23
TMEM88B-201ENST00000378821 ZYXQ15942 572 aaKnown RBP22.75■■□□□ 1.23
TMEM88B-201ENST00000378821 MORN1Q5T089 497 aa22.75■■□□□ 1.23
TMEM88B-201ENST00000378821 SIAH1Q8IUQ4 282 aa22.75■■□□□ 1.23
TMEM88B-201ENST00000378821 SLC44A5Q8NCS7 719 aa22.75■■□□□ 1.23
TMEM88B-201ENST00000378821 DYNLL2Q96FJ2 89 aa22.75■■□□□ 1.23
TMEM88B-201ENST00000378821 NUDT12Q9BQG2 462 aa22.75■■□□□ 1.23
TMEM88B-201ENST00000378821 PORCNQ9H237 461 aa22.75■■□□□ 1.23
TMEM88B-201ENST00000378821 USP17L12C9JPN9 530 aa22.74■■□□□ 1.23
TMEM88B-201ENST00000378821 USP17L21D6R901 530 aa22.74■■□□□ 1.23
TMEM88B-201ENST00000378821 MAP3K21Q5TCX8 1036 aa22.74■■□□□ 1.23
TMEM88B-201ENST00000378821 TSHZ3Q63HK5 1081 aa22.74■■□□□ 1.23
TMEM88B-201ENST00000378821 C16orf86Q6ZW13 317 aa22.74■■□□□ 1.23
TMEM88B-201ENST00000378821 OTUD7AQ8TE49 926 aaPredicted RBP22.74■■□□□ 1.23
TMEM88B-201ENST00000378821 GPATCH3Q96I76 525 aa22.74■■□□□ 1.23
TMEM88B-201ENST00000378821 CCDC17Q96LX7 622 aa22.74■■□□□ 1.23
TMEM88B-201ENST00000378821 STRBPQ96SI9 672 aaKnown RBP22.74■■□□□ 1.23
TMEM88B-201ENST00000378821 SMIM22K7EJ46 135 aa22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 IGHDP01880 384 aa22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 ANKRD45Q5TZF3 282 aa22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 CTR9Q6PD62 1173 aa22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 GPR142Q7Z601 462 aa22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 TRIB2Q92519 343 aa22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 DEFB118Q96PH6 123 aa22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 RWDD1Q9H446 243 aaPredicted RBP22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 SLC4A4Q9Y6R1 1079 aa22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 RPTORQ8N122 1335 aa22.73■■□□□ 1.23
TMEM88B-201ENST00000378821 CDK8P49336 464 aa22.72■■□□□ 1.23
TMEM88B-201ENST00000378821 SBK1Q52WX2 424 aa22.72■■□□□ 1.23
TMEM88B-201ENST00000378821 GIMAP6Q6P9H5 292 aa22.72■■□□□ 1.23
TMEM88B-201ENST00000378821 PLEKHH3Q7Z736 793 aa22.72■■□□□ 1.23
TMEM88B-201ENST00000378821 TRMT44Q8IYL2 757 aaKnown RBP22.72■■□□□ 1.23
TMEM88B-201ENST00000378821 PAGR1Q9BTK6 254 aa22.72■■□□□ 1.23
TMEM88B-201ENST00000378821 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.72■■□□□ 1.23
TMEM88B-201ENST00000378821 RPAP3Q9H6T3 665 aaPredicted RBP22.72■■□□□ 1.23
TMEM88B-201ENST00000378821 TTC41PQ6P2S7 1318 aa22.72■■□□□ 1.23
TMEM88B-201ENST00000378821 CYP2D7A0A087X1C5 515 aa22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 SPDYE16A6NNV3 312 aaPredicted RBP22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 MPHOSPH10O00566 681 aaKnown RBP22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 FARP2O94887 1054 aaPredicted RBP22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 AKR1B1P15121 316 aa22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 CCNA1P78396 465 aa22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 KIAA1755Q5JYT7 1200 aa22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 SMC5Q8IY18 1101 aa22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 LPAR1Q92633 364 aa22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 DDRGK1Q96HY6 314 aa22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 BTBD7Q9P203 1132 aa22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 TMX2Q9Y320 296 aa22.71■■□□□ 1.23
TMEM88B-201ENST00000378821 A0A0G2JMZ2 1700 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms