RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 KIF5BP33176 963 aa17.04■□□□□ 0.32
RAB3IP-203ENST00000378809 NT5C2P49902 561 aa17.04■□□□□ 0.32
RAB3IP-203ENST00000378809 SCNN1DP51172 638 aa17.04■□□□□ 0.32
RAB3IP-203ENST00000378809 DGKHQ86XP1 1220 aa17.04■□□□□ 0.32
RAB3IP-203ENST00000378809 SRBD1Q8N5C6 995 aaKnown RBP17.04■□□□□ 0.32
RAB3IP-203ENST00000378809 PNMA1Q8ND90 353 aa17.04■□□□□ 0.32
RAB3IP-203ENST00000378809 SUGT1Q9Y2Z0 365 aa17.04■□□□□ 0.32
RAB3IP-203ENST00000378809 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 PKN1Q16512 942 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 STYK1Q6J9G0 422 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 FMR1NBQ8N0W7 255 aaPredicted RBP17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 FAM200AQ8TCP9 573 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 CAMKK2Q96RR4 588 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 SDF4Q9BRK5 362 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 WDHD1O75717 1129 aaPredicted RBP17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 ATP2B1P20020 1258 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 RASA1P20936 1047 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 CDK8P49336 464 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 MAP3K14Q99558 947 aa17.03■□□□□ 0.32
RAB3IP-203ENST00000378809 CNTNAP5Q8WYK1 1306 aa17.02■□□□□ 0.32
RAB3IP-203ENST00000378809 PPP6R2O75170 966 aa17.02■□□□□ 0.32
RAB3IP-203ENST00000378809 RILPL1Q5EBL4 403 aa17.02■□□□□ 0.32
RAB3IP-203ENST00000378809 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
RAB3IP-203ENST00000378809 BRMS1Q9HCU9 246 aa17.02■□□□□ 0.32
RAB3IP-203ENST00000378809 RRAGDQ9NQL2 400 aaPredicted RBP17.02■□□□□ 0.32
RAB3IP-203ENST00000378809 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 ESPNB1AK53 854 aa17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 PTMAP06454 111 aaKnown RBP17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 KRT2P35908 639 aa17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 PTPAQ15257 358 aa17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 AXDND1Q5T1B0 1012 aaPredicted RBP17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 CABP5Q9NP86 173 aa17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 PFKFB1P16118 471 aa17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 CMA1P23946 247 aa17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 LUZP1Q86V48 1076 aa17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 DNAJC25Q9H1X3 360 aa17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 DLEC1Q9Y238 1755 aa17.01■□□□□ 0.31
RAB3IP-203ENST00000378809 ADCY5O95622 1261 aa17■□□□□ 0.31
RAB3IP-203ENST00000378809 SF3B2Q13435 895 aaKnown RBP17■□□□□ 0.31
RAB3IP-203ENST00000378809 PODNQ7Z5L7 613 aa17■□□□□ 0.31
RAB3IP-203ENST00000378809 ERCC4Q92889 916 aaPredicted RBP17■□□□□ 0.31
RAB3IP-203ENST00000378809 CNKSR1Q969H4 720 aa17■□□□□ 0.31
RAB3IP-203ENST00000378809 SHISA4Q96DD7 197 aa17■□□□□ 0.31
RAB3IP-203ENST00000378809 PHF20Q9BVI0 1012 aa17■□□□□ 0.31
RAB3IP-203ENST00000378809 KCNQ5Q9NR82 932 aa17■□□□□ 0.31
RAB3IP-203ENST00000378809 TCP11L1Q9NUJ3 509 aa17■□□□□ 0.31
RAB3IP-203ENST00000378809 USP40Q9NVE5 1235 aa17■□□□□ 0.31
RAB3IP-203ENST00000378809 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
RAB3IP-203ENST00000378809 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
RAB3IP-203ENST00000378809 ZNF202O95125 648 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 SCG2P13521 617 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 TOB1P50616 345 aaPredicted RBP16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 TEKT1Q969V4 418 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 CLIC6Q96NY7 704 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 CBX8Q9HC52 389 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 ZNF165P49910 485 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 ZRSR1Q15695 479 aaKnown RBP16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 STX1AQ16623 288 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 STAG2Q8N3U4 1231 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 ANKS1AQ92625 1134 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 TMEM47Q9BQJ4 181 aa16.99■□□□□ 0.31
RAB3IP-203ENST00000378809 ECE2O60344 883 aa16.98■□□□□ 0.31
RAB3IP-203ENST00000378809 SYKP43405 635 aa16.98■□□□□ 0.31
RAB3IP-203ENST00000378809 NLRP5P59047 1200 aa16.98■□□□□ 0.31
RAB3IP-203ENST00000378809 SHC4Q6S5L8 630 aa16.98■□□□□ 0.31
RAB3IP-203ENST00000378809 KIAA0825Q8IV33 1275 aa16.98■□□□□ 0.31
RAB3IP-203ENST00000378809 KRI1Q8N9T8 703 aaKnown RBP16.98■□□□□ 0.31
RAB3IP-203ENST00000378809 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.98■□□□□ 0.31
RAB3IP-203ENST00000378809 PCDHB6Q9Y5E3 794 aa16.98■□□□□ 0.31
RAB3IP-203ENST00000378809 CUTAO60888 179 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 RBM5P52756 815 aaKnown RBP eCLIP16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 GRM4Q14833 912 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 DDX4Q9NQI0 724 aaKnown RBP16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 CCDC39Q9UFE4 941 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 CEP131Q9UPN4 1083 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 SNED1Q8TER0 1413 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 A0A087WWV3 80 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 FAM205CA6NFA0 338 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 GNAQP50148 359 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 AOC3Q16853 763 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 PFKFB3Q16875 520 aaPredicted RBP16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 NEDD1Q8NHV4 660 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 PDGFDQ9GZP0 370 aaPredicted RBP16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 MAD2L2Q9UI95 211 aa16.97■□□□□ 0.31
RAB3IP-203ENST00000378809 MSNP26038 577 aaKnown RBP16.96■□□□□ 0.31
RAB3IP-203ENST00000378809 CRKP46108 304 aa16.96■□□□□ 0.31
RAB3IP-203ENST00000378809 HS1BP3Q53T59 392 aa16.96■□□□□ 0.31
RAB3IP-203ENST00000378809 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.31
RAB3IP-203ENST00000378809 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.31
RAB3IP-203ENST00000378809 CEP95Q96GE4 821 aa16.96■□□□□ 0.31
RAB3IP-203ENST00000378809 GOLGA8HP0CJ92 632 aa16.96■□□□□ 0.3
RAB3IP-203ENST00000378809 BAG6P46379 1132 aa16.96■□□□□ 0.3
RAB3IP-203ENST00000378809 EARS2Q5JPH6 523 aaKnown RBP16.96■□□□□ 0.3
RAB3IP-203ENST00000378809 SPECC1Q5M775 1068 aa16.96■□□□□ 0.3
RAB3IP-203ENST00000378809 STRIP1Q5VSL9 837 aa16.96■□□□□ 0.3
RAB3IP-203ENST00000378809 RESP18Q5W5W9 173 aa16.96■□□□□ 0.3
RAB3IP-203ENST00000378809 CDC42EP5Q6NZY7 148 aa16.96■□□□□ 0.3
RAB3IP-203ENST00000378809 DEFB132Q7Z7B7 95 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms