RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 FERMT2Q96AC1 680 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 COL1A1P02452 1464 aaPredicted RBP20.75■□□□□ 0.91
TDP2-202ENST00000378198 USP49Q70CQ1 688 aa20.75■□□□□ 0.91
TDP2-202ENST00000378198 SHISA4Q96DD7 197 aa20.75■□□□□ 0.91
TDP2-202ENST00000378198 ACSBG1Q96GR2 724 aa20.75■□□□□ 0.91
TDP2-202ENST00000378198 BRMS1Q9HCU9 246 aa20.75■□□□□ 0.91
TDP2-202ENST00000378198 PPP2R2CQ9Y2T4 447 aa20.75■□□□□ 0.91
TDP2-202ENST00000378198 LAMB1P07942 1786 aa20.75■□□□□ 0.91
TDP2-202ENST00000378198 GOLGA8FQ08AF8 430 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 GOLGA8DPQ0D2H9 430 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 SF3B3Q15393 1217 aaKnown RBP20.74■□□□□ 0.91
TDP2-202ENST00000378198 CLEC4GQ6UXB4 293 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 BSDC1Q9NW68 430 aaPredicted RBP20.74■□□□□ 0.91
TDP2-202ENST00000378198 DDAH1O94760 285 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 ZNF827Q17R98 1081 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 ERCC6LQ2NKX8 1250 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 HSP90AA4PQ58FG1 418 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 TRMT44Q8IYL2 757 aaKnown RBP20.74■□□□□ 0.91
TDP2-202ENST00000378198 TC2NQ8N9U0 490 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 DHX58Q96C10 678 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 V9GY48 417 aaPredicted RBP20.74■□□□□ 0.91
TDP2-202ENST00000378198 NRAPQ86VF7 1730 aa20.74■□□□□ 0.91
TDP2-202ENST00000378198 ROBO1Q9Y6N7 1651 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 SLFN14P0C7P3 912 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 DYNLL1P63167 89 aaKnown RBP20.73■□□□□ 0.91
TDP2-202ENST00000378198 NR1I3Q14994 352 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 SH3RF1Q7Z6J0 888 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 SPATA31A1Q5TZJ5 1347 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 FAM205CA6NFA0 338 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 H2AFXP16104 143 aaPredicted RBP20.73■□□□□ 0.91
TDP2-202ENST00000378198 GABPB1Q06547 395 aaPredicted RBP20.73■□□□□ 0.91
TDP2-202ENST00000378198 TROAPQ12815 778 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 PTPN21Q16825 1174 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 KRT222Q8N1A0 295 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 MED15Q96RN5 788 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 SAMSN1Q9NSI8 373 aaKnown RBP20.73■□□□□ 0.91
TDP2-202ENST00000378198 FAM53CQ9NYF3 392 aa20.73■□□□□ 0.91
TDP2-202ENST00000378198 AHDC1Q5TGY3 1603 aaPredicted RBP20.72■□□□□ 0.91
TDP2-202ENST00000378198 VWA3AA6NCI4 1184 aa20.72■□□□□ 0.91
TDP2-202ENST00000378198 PLEKHA8P1O95397 391 aa20.72■□□□□ 0.91
TDP2-202ENST00000378198 CCDC88AQ3V6T2 1871 aa20.72■□□□□ 0.91
TDP2-202ENST00000378198 ZNF831Q5JPB2 1677 aa20.72■□□□□ 0.91
TDP2-202ENST00000378198 A0A1B0GTH6 734 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 SMIM22K7EJ46 135 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 SEMA3EO15041 775 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 ERFEQ4G0M1 354 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 EARS2Q5JPH6 523 aaKnown RBP20.71■□□□□ 0.91
TDP2-202ENST00000378198 SPATA1Q5VX52 437 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 CTR9Q6PD62 1173 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 SMARCC1Q92922 1105 aaPredicted RBP20.71■□□□□ 0.91
TDP2-202ENST00000378198 PAGE5Q96GU1 130 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 EPSTI1Q96J88 318 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 GSDMAQ96QA5 445 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 A0A087X0B3 334 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 PRDM1O75626 825 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 TMTC3Q6ZXV5 915 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 MARCH10Q8NA82 808 aaPredicted RBP20.71■□□□□ 0.91
TDP2-202ENST00000378198 SYMPKQ92797 1274 aaKnown RBP20.71■□□□□ 0.91
TDP2-202ENST00000378198 TNFRSF25Q93038 417 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 FAM84BQ96KN1 310 aaPredicted RBP20.71■□□□□ 0.91
TDP2-202ENST00000378198 MINPP1Q9UNW1 487 aa20.71■□□□□ 0.91
TDP2-202ENST00000378198 CYP2D7A0A087X1C5 515 aa20.7■□□□□ 0.9
TDP2-202ENST00000378198 NPHP1O15259 732 aa20.7■□□□□ 0.9
TDP2-202ENST00000378198 URI1O94763 535 aaPredicted RBP20.7■□□□□ 0.9
TDP2-202ENST00000378198 ADKP55263 362 aaKnown RBP20.7■□□□□ 0.9
TDP2-202ENST00000378198 LRRN4CLQ8ND94 238 aa20.7■□□□□ 0.9
TDP2-202ENST00000378198 MNS1Q8NEH6 495 aa20.7■□□□□ 0.9
TDP2-202ENST00000378198 ORC4O43929 436 aa20.69■□□□□ 0.9
TDP2-202ENST00000378198 AFMP43652 599 aa20.69■□□□□ 0.9
TDP2-202ENST00000378198 TTC38Q5R3I4 469 aa20.69■□□□□ 0.9
TDP2-202ENST00000378198 UBXN4Q92575 508 aa20.69■□□□□ 0.9
TDP2-202ENST00000378198 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.69■□□□□ 0.9
TDP2-202ENST00000378198 DPYDQ12882 1025 aa20.69■□□□□ 0.9
TDP2-202ENST00000378198 CTCFLQ8NI51 663 aaPredicted RBP20.69■□□□□ 0.9
TDP2-202ENST00000378198 PARP3Q9Y6F1 533 aa20.69■□□□□ 0.9
TDP2-202ENST00000378198 CNTNAP5Q8WYK1 1306 aa20.69■□□□□ 0.9
TDP2-202ENST00000378198 SYNRGQ9UMZ2 1314 aa20.69■□□□□ 0.9
TDP2-202ENST00000378198 MAST2Q6P0Q8 1798 aa20.69■□□□□ 0.9
TDP2-202ENST00000378198 hCG_1642624A0A1W2PR95 340 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 USP17L12C9JPN9 530 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 USP17L21D6R901 530 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 TPM1P09493 284 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 CUL4BQ13620 913 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 BMS1Q14692 1282 aaKnown RBP20.68■□□□□ 0.9
TDP2-202ENST00000378198 PDS5AQ29RF7 1337 aaKnown RBP20.68■□□□□ 0.9
TDP2-202ENST00000378198 FBXO33Q7Z6M2 555 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 ZNF384Q8TF68 577 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 PANX2Q96RD6 677 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 CTAGE1Q96RT6 745 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 EFCAB8A8MWE9 144 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 AKR1B15C9JRZ8 316 aaPredicted RBP20.68■□□□□ 0.9
TDP2-202ENST00000378198 CASQ1P31415 396 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 ATP2C1P98194 919 aaPredicted RBP20.68■□□□□ 0.9
TDP2-202ENST00000378198 ZNF174Q15697 407 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 NPY5RQ15761 445 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 ARHGAP29Q52LW3 1261 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
TDP2-202ENST00000378198 PYM1Q9BRP8 204 aaKnown RBP20.68■□□□□ 0.9
TDP2-202ENST00000378198 WTIPA6NIX2 430 aaPredicted RBP20.67■□□□□ 0.9
TDP2-202ENST00000378198 FANCGO15287 622 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms