RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 CTDSPL2Q05D32 466 aa24.46■■□□□ 1.51
TRIM13-203ENST00000378183 SIAH1Q8IUQ4 282 aa24.46■■□□□ 1.51
TRIM13-203ENST00000378183 ZNF296Q8WUU4 475 aaPredicted RBP24.46■■□□□ 1.51
TRIM13-203ENST00000378183 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.46■■□□□ 1.51
TRIM13-203ENST00000378183 ZFYVE28Q9HCC9 887 aa24.46■■□□□ 1.51
TRIM13-203ENST00000378183 AGTPBP1Q9UPW5 1226 aa24.46■■□□□ 1.51
TRIM13-203ENST00000378183 ZMYM6O95789 1325 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 A0A1W2PRG0 241 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 C19orf81C9J6K1 198 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 PRDM1O75626 825 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 CLEC10AQ8IUN9 316 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 MKNK2Q9HBH9 465 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 INCENPQ9NQS7 918 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 EMILIN3Q9NT22 766 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 ANAPC4Q9UJX5 808 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 SLC45A1Q9Y2W3 748 aa24.45■■□□□ 1.5
TRIM13-203ENST00000378183 ADGRA2Q96PE1 1338 aa24.44■■□□□ 1.5
TRIM13-203ENST00000378183 LAMA4Q16363 1823 aa24.43■■□□□ 1.5
TRIM13-203ENST00000378183 TLR2O60603 784 aa24.43■■□□□ 1.5
TRIM13-203ENST00000378183 CYP2C8P10632 490 aa24.43■■□□□ 1.5
TRIM13-203ENST00000378183 BMP2KLQ5H9B9 411 aa24.43■■□□□ 1.5
TRIM13-203ENST00000378183 USP17L2Q6R6M4 530 aa24.43■■□□□ 1.5
TRIM13-203ENST00000378183 KIAA1683Q9H0B3 1180 aa24.43■■□□□ 1.5
TRIM13-203ENST00000378183 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.43■■□□□ 1.5
TRIM13-203ENST00000378183 RAD50Q92878 1312 aa24.42■■□□□ 1.5
TRIM13-203ENST00000378183 SLC3A2P08195 630 aaKnown RBP24.42■■□□□ 1.5
TRIM13-203ENST00000378183 ZYXQ15942 572 aaKnown RBP24.42■■□□□ 1.5
TRIM13-203ENST00000378183 TMOD4Q9NZQ9 345 aa24.42■■□□□ 1.5
TRIM13-203ENST00000378183 FKTNO75072 461 aa24.41■■□□□ 1.5
TRIM13-203ENST00000378183 PDE4BQ07343 736 aa24.41■■□□□ 1.5
TRIM13-203ENST00000378183 ZNF444Q8N0Y2 327 aaPredicted RBP24.41■■□□□ 1.5
TRIM13-203ENST00000378183 C12orf42Q96LP6 360 aa24.41■■□□□ 1.5
TRIM13-203ENST00000378183 FEZ1Q99689 392 aa24.41■■□□□ 1.5
TRIM13-203ENST00000378183 DSCC1Q9BVC3 393 aa24.41■■□□□ 1.5
TRIM13-203ENST00000378183 NBPF3Q9H094 633 aa24.41■■□□□ 1.5
TRIM13-203ENST00000378183 ZNF287Q9HBT7 754 aa24.41■■□□□ 1.5
TRIM13-203ENST00000378183 IGKV6D-41A0A0C4DH26 115 aa24.4■■□□□ 1.5
TRIM13-203ENST00000378183 FGRP09769 529 aa24.4■■□□□ 1.5
TRIM13-203ENST00000378183 HAND2P61296 217 aa24.4■■□□□ 1.5
TRIM13-203ENST00000378183 ICA1Q05084 483 aa24.4■■□□□ 1.5
TRIM13-203ENST00000378183 C17orf99Q6UX52 265 aa24.4■■□□□ 1.5
TRIM13-203ENST00000378183 RUFY2Q8WXA3 655 aa24.4■■□□□ 1.5
TRIM13-203ENST00000378183 PARK7Q99497 189 aaKnown RBP24.4■■□□□ 1.5
TRIM13-203ENST00000378183 MYH4Q9Y623 1939 aa24.39■■□□□ 1.5
TRIM13-203ENST00000378183 SGSM2O43147 1006 aa24.39■■□□□ 1.49
TRIM13-203ENST00000378183 EEF2P13639 858 aaKnown RBP24.39■■□□□ 1.49
TRIM13-203ENST00000378183 USP14P54578 494 aa24.39■■□□□ 1.49
TRIM13-203ENST00000378183 CAP1Q01518 475 aa24.39■■□□□ 1.49
TRIM13-203ENST00000378183 FAM47AQ5JRC9 791 aa24.39■■□□□ 1.49
TRIM13-203ENST00000378183 KIAA1755Q5JYT7 1200 aa24.39■■□□□ 1.49
TRIM13-203ENST00000378183 KANSL2Q9H9L4 492 aa24.39■■□□□ 1.49
TRIM13-203ENST00000378183 CPA4Q9UI42 421 aa24.39■■□□□ 1.49
TRIM13-203ENST00000378183 ZSWIM8A7E2V4 1837 aa24.39■■□□□ 1.49
TRIM13-203ENST00000378183 HOXA7P31268 230 aaPredicted RBP24.38■■□□□ 1.49
TRIM13-203ENST00000378183 SP3Q02447 781 aa24.38■■□□□ 1.49
TRIM13-203ENST00000378183 ASCC2Q9H1I8 757 aaPredicted RBP24.38■■□□□ 1.49
TRIM13-203ENST00000378183 TMX2Q9Y320 296 aa24.38■■□□□ 1.49
TRIM13-203ENST00000378183 PLIN4Q96Q06 1357 aa24.38■■□□□ 1.49
TRIM13-203ENST00000378183 TFAP4Q01664 338 aa24.37■■□□□ 1.49
TRIM13-203ENST00000378183 PTH1RQ03431 593 aa24.37■■□□□ 1.49
TRIM13-203ENST00000378183 TBC1D10CQ8IV04 446 aa24.37■■□□□ 1.49
TRIM13-203ENST00000378183 NEDD1Q8NHV4 660 aa24.37■■□□□ 1.49
TRIM13-203ENST00000378183 ARHGEF10LQ9HCE6 1279 aa24.37■■□□□ 1.49
TRIM13-203ENST00000378183 ORC4O43929 436 aa24.36■■□□□ 1.49
TRIM13-203ENST00000378183 BCRP11274 1271 aa24.36■■□□□ 1.49
TRIM13-203ENST00000378183 VCAM1P19320 739 aa24.36■■□□□ 1.49
TRIM13-203ENST00000378183 PABPC4Q13310 644 aaKnown RBP eCLIP24.36■■□□□ 1.49
TRIM13-203ENST00000378183 NKX2-3Q8TAU0 364 aa24.36■■□□□ 1.49
TRIM13-203ENST00000378183 PNMA3Q9UL41 463 aa24.36■■□□□ 1.49
TRIM13-203ENST00000378183 TSPY3P0CV98 308 aa24.35■■□□□ 1.49
TRIM13-203ENST00000378183 TSPY8P0CW00 308 aa24.35■■□□□ 1.49
TRIM13-203ENST00000378183 OSBPP22059 807 aa24.35■■□□□ 1.49
TRIM13-203ENST00000378183 CD99L2Q8TCZ2 262 aa24.35■■□□□ 1.49
TRIM13-203ENST00000378183 CEP95Q96GE4 821 aa24.35■■□□□ 1.49
TRIM13-203ENST00000378183 NYAP2Q9P242 653 aa24.35■■□□□ 1.49
TRIM13-203ENST00000378183 RLFQ13129 1914 aa24.34■■□□□ 1.49
TRIM13-203ENST00000378183 ZNF213O14771 459 aa24.34■■□□□ 1.49
TRIM13-203ENST00000378183 ATP2B2Q01814 1243 aa24.34■■□□□ 1.49
TRIM13-203ENST00000378183 AKNAD1Q5T1N1 836 aa24.34■■□□□ 1.49
TRIM13-203ENST00000378183 STAG1Q8WVM7 1258 aa24.34■■□□□ 1.49
TRIM13-203ENST00000378183 P2RX7Q99572 595 aaKnown RBP24.34■■□□□ 1.49
TRIM13-203ENST00000378183 ESYT1Q9BSJ8 1104 aa24.34■■□□□ 1.49
TRIM13-203ENST00000378183 VCPKMTQ9H867 229 aa24.34■■□□□ 1.49
TRIM13-203ENST00000378183 MTMR4Q9NYA4 1195 aa24.34■■□□□ 1.49
TRIM13-203ENST00000378183 MGAMO43451 1857 aa24.34■■□□□ 1.49
TRIM13-203ENST00000378183 RANBP6O60518 1105 aaKnown RBP24.33■■□□□ 1.49
TRIM13-203ENST00000378183 POTEEQ6S8J3 1075 aa24.33■■□□□ 1.49
TRIM13-203ENST00000378183 CATSPERGQ6ZRH7 1159 aa24.33■■□□□ 1.49
TRIM13-203ENST00000378183 CTU1Q7Z7A3 348 aaKnown RBP24.33■■□□□ 1.49
TRIM13-203ENST00000378183 SMCR8Q8TEV9 937 aaPredicted RBP24.33■■□□□ 1.49
TRIM13-203ENST00000378183 ERO1AQ96HE7 468 aa24.33■■□□□ 1.49
TRIM13-203ENST00000378183 SH2D4AQ9H788 454 aa24.33■■□□□ 1.49
TRIM13-203ENST00000378183 IL17RBQ9NRM6 502 aa24.33■■□□□ 1.49
TRIM13-203ENST00000378183 CTNNA3Q9UI47 895 aa24.33■■□□□ 1.49
TRIM13-203ENST00000378183 PARP14Q460N5 1801 aa24.33■■□□□ 1.48
TRIM13-203ENST00000378183 TSPY2A6NKD2 308 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 USP17L15C9J2P7 530 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 USP17L13C9JLJ4 530 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 USP17L11C9JVI0 530 aa24.32■■□□□ 1.48
TRIM13-203ENST00000378183 USP17L18D6R9N7 530 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms