RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 FEZ1Q99689 392 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 ST7Q9NRC1 585 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 PPP2R2CQ9Y2T4 447 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 RTL9Q8NET4 1388 aa18.53■□□□□ 0.56
TRIM27-202ENST00000377199 COL1A1P02452 1464 aaPredicted RBP18.53■□□□□ 0.56
TRIM27-202ENST00000377199 MORC3Q14149 939 aa18.52■□□□□ 0.56
TRIM27-202ENST00000377199 SPECC1LQ69YQ0 1117 aa18.52■□□□□ 0.56
TRIM27-202ENST00000377199 MLKLQ8NB16 471 aa18.52■□□□□ 0.56
TRIM27-202ENST00000377199 CARD6Q9BX69 1037 aa18.52■□□□□ 0.56
TRIM27-202ENST00000377199 CD44P16070 742 aaKnown RBP18.52■□□□□ 0.56
TRIM27-202ENST00000377199 NLRP5P59047 1200 aa18.52■□□□□ 0.56
TRIM27-202ENST00000377199 SRP68Q9UHB9 627 aaKnown RBP18.52■□□□□ 0.56
TRIM27-202ENST00000377199 DDX41Q9UJV9 622 aaKnown RBP18.52■□□□□ 0.56
TRIM27-202ENST00000377199 MECOMQ03112 1051 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 DMTNQ08495 405 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 PTGDRQ13258 359 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 CTCFLQ8NI51 663 aaPredicted RBP18.51■□□□□ 0.55
TRIM27-202ENST00000377199 IRX2Q9BZI1 471 aaPredicted RBP18.51■□□□□ 0.55
TRIM27-202ENST00000377199 DACH1Q9UI36 760 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 TSPY2A6NKD2 308 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 CCT6AP40227 531 aaKnown RBP18.51■□□□□ 0.55
TRIM27-202ENST00000377199 REXO1L1PQ8IX06 675 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 ZSWIM4Q9H7M6 989 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 BRMS1Q9HCU9 246 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 CHD4Q14839 1912 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 TROAPQ12815 778 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 SRBD1Q8N5C6 995 aaKnown RBP18.51■□□□□ 0.55
TRIM27-202ENST00000377199 RASGRP4Q8TDF6 673 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 WDR24Q96S15 920 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 PHF20Q9BVI0 1012 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 LZTFL1Q9NQ48 299 aa18.51■□□□□ 0.55
TRIM27-202ENST00000377199 BAZ2AQ9UIF9 1905 aaKnown RBP18.5■□□□□ 0.55
TRIM27-202ENST00000377199 TTC38Q5R3I4 469 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 FAM182BQ5T319 152 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 TRIM65Q6PJ69 517 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 TC2NQ8N9U0 490 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 UBXN4Q92575 508 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 GPKOWQ92917 476 aaPredicted RBP eCLIP18.5■□□□□ 0.551e-6■■□□□ 13.8
TRIM27-202ENST00000377199 PAGE5Q96GU1 130 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 MYH2Q9UKX2 1941 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 SOWAHDA6NJG2 315 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 ARHGAP6O43182 974 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 SARSP49591 514 aaKnown RBP18.5■□□□□ 0.55
TRIM27-202ENST00000377199 ZNF771Q7L3S4 317 aaPredicted RBP18.5■□□□□ 0.55
TRIM27-202ENST00000377199 LINC00116Q8NCU8 138 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 ENOX1Q8TC92 643 aaKnown RBP18.5■□□□□ 0.55
TRIM27-202ENST00000377199 DOT1LQ8TEK3 1739 aa18.5■□□□□ 0.55
TRIM27-202ENST00000377199 TXNRD3Q86VQ6 643 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 TMEM139Q8IV31 216 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 PLIN2Q99541 437 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 L2HGDHQ9H9P8 463 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 KCND1Q9NSA2 647 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 MCM9Q9NXL9 1143 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 SYNRGQ9UMZ2 1314 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 A0A0U1RQJ8 604 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 ZSCAN12O43309 604 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 PLCD1P51178 756 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 FAM98CQ17RN3 349 aaKnown RBP18.49■□□□□ 0.55
TRIM27-202ENST00000377199 ATRIPQ8WXE1 791 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 CTNND2Q9UQB3 1225 aa18.49■□□□□ 0.55
TRIM27-202ENST00000377199 ZNF18P17022 549 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 FUT2Q10981 343 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 UBE4AQ14139 1066 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 RASSF8Q8NHQ8 419 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 BSDC1Q9NW68 430 aaPredicted RBP18.48■□□□□ 0.55
TRIM27-202ENST00000377199 STRCQ7RTU9 1775 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 KDM4FA0A1W2PPD8 638 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 CCP110O43303 1012 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 USP17L8P0C7I0 530 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 NSUN4Q96CB9 384 aaKnown RBP18.48■□□□□ 0.55
TRIM27-202ENST00000377199 ZNF446Q9NWS9 450 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 ZNF804BA4D1E1 1349 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 MYH14Q7Z406 1995 aaKnown RBP18.48■□□□□ 0.55
TRIM27-202ENST00000377199 PRPF3O43395 683 aaKnown RBP18.48■□□□□ 0.55
TRIM27-202ENST00000377199 KANK3Q6NY19 840 aa18.48■□□□□ 0.55
TRIM27-202ENST00000377199 ZNF579Q8NAF0 562 aaKnown RBP18.48■□□□□ 0.55
TRIM27-202ENST00000377199 DCP1AQ9NPI6 582 aaPredicted RBP18.48■□□□□ 0.55
TRIM27-202ENST00000377199 PES1O00541 588 aaKnown RBP18.47■□□□□ 0.55
TRIM27-202ENST00000377199 SLFN14P0C7P3 912 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 CASQ1P31415 396 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 TMTC3Q6ZXV5 915 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 NBPF5PQ86XG9 351 aaPredicted RBP18.47■□□□□ 0.55
TRIM27-202ENST00000377199 IGSF22Q8N9C0 903 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 CCDC34Q96HJ3 373 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 LRP5O75197 1615 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 CCDC93Q567U6 631 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 NT5DC1Q5TFE4 455 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 RGS22Q8NE09 1264 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 EEF2KMTQ96G04 330 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 GPR101Q96P66 508 aaPredicted RBP18.47■□□□□ 0.55
TRIM27-202ENST00000377199 ANAPC4Q9UJX5 808 aa18.47■□□□□ 0.55
TRIM27-202ENST00000377199 HIBADHP31937 336 aaKnown RBP18.46■□□□□ 0.55
TRIM27-202ENST00000377199 CLCN6P51797 869 aa18.46■□□□□ 0.55
TRIM27-202ENST00000377199 RBL2Q08999 1139 aa18.46■□□□□ 0.55
TRIM27-202ENST00000377199 TEX35Q5T0J7 233 aa18.46■□□□□ 0.55
TRIM27-202ENST00000377199 PPFIBP1Q86W92 1011 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms