RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SMAP1Q8IYB5 467 aaPredicted RBP13.26□□□□□ -0.29
DDR1-227ENST00000376570 SMARCC2Q8TAQ2 1214 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 CAPZA3Q96KX2 299 aa13.26□□□□□ -0.29
DDR1-227ENST00000376570 GNAT2P19087 354 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 GTF2F1P35269 517 aaKnown RBP eCLIP13.25□□□□□ -0.298e-7■■■■□ 24.7
DDR1-227ENST00000376570 LRRC8AQ8IWT6 810 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 DEF6Q9H4E7 631 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 TTF2Q9UNY4 1162 aaKnown RBP13.25□□□□□ -0.29
DDR1-227ENST00000376570 REREQ9P2R6 1566 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 SLIT1O75093 1534 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
DDR1-227ENST00000376570 EPS15P42566 896 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 UBXN2AP68543 259 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 SP4Q02446 784 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 ZNF804AQ7Z570 1209 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 ILDR1Q86SU0 546 aaPredicted RBP13.25□□□□□ -0.29
DDR1-227ENST00000376570 KIAA1524Q8TCG1 905 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 HPS3Q969F9 1004 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 TECP42680 631 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 NLRP12P59046 1061 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
DDR1-227ENST00000376570 ZNF34Q8IZ26 560 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 CCDC47Q96A33 483 aaKnown RBP13.25□□□□□ -0.29
DDR1-227ENST00000376570 ZBTB21Q9ULJ3 1066 aa13.25□□□□□ -0.29
DDR1-227ENST00000376570 CBFA2T2O43439 604 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 PRKG1Q13976 671 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 GRIK5Q16478 980 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 APBA3O96018 575 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 MRPS25P82663 173 aaKnown RBP13.24□□□□□ -0.29
DDR1-227ENST00000376570 ERCC6LQ2NKX8 1250 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 DPP8Q6V1X1 898 aaPredicted RBP13.24□□□□□ -0.29
DDR1-227ENST00000376570 KRBA2Q6ZNG9 492 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 KCTD1Q719H9 257 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 FMR1NBQ8N0W7 255 aaPredicted RBP13.24□□□□□ -0.29
DDR1-227ENST00000376570 TMTC2Q8N394 836 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 IGDCC4Q8TDY8 1250 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 BBXQ8WY36 941 aaPredicted RBP13.24□□□□□ -0.29
DDR1-227ENST00000376570 EYA3Q99504 573 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 NYXQ9GZU5 481 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 GUCA1BQ9UMX6 200 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 CHMP2AO43633 222 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 MYO1BO43795 1136 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 PHACTR2O75167 634 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 YEATS4O95619 227 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 TCERG1LQ5VWI1 586 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
DDR1-227ENST00000376570 SEPT11Q9NVA2 429 aaKnown RBP13.24□□□□□ -0.29
DDR1-227ENST00000376570 CALM1P0DP23 149 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 CALM2P0DP24 149 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 CALM3P0DP25 149 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 TAL1P17542 331 aaPredicted RBP13.23□□□□□ -0.29
DDR1-227ENST00000376570 RILPL1Q5EBL4 403 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 QTRT2Q9H974 415 aaKnown RBP13.23□□□□□ -0.29
DDR1-227ENST00000376570 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 RGPD2P0DJD1 1756 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 KLRF2D3W0D1 207 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 SERPINB2P05120 415 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 RHOXF2BP0C7M4 288 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 CMA1P23946 247 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
DDR1-227ENST00000376570 KIAA1328Q86T90 577 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 RHOXF2Q9BQY4 288 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 CARD6Q9BX69 1037 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 NBPF3Q9H094 633 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 KANSL2Q9H9L4 492 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 TCP11L1Q9NUJ3 509 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 ANKRD26Q9UPS8 1709 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 NTSR2O95665 410 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 UBXN1Q04323 297 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 CTR9Q6PD62 1173 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 NELFCDQ8IXH7 590 aa13.23□□□□□ -0.29
DDR1-227ENST00000376570 IRX2Q9BZI1 471 aaPredicted RBP13.23□□□□□ -0.29
DDR1-227ENST00000376570 CTDP1Q9Y5B0 961 aaPredicted RBP13.23□□□□□ -0.29
DDR1-227ENST00000376570 CLRN2A0PK11 232 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 ZBTB22O15209 634 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 GDF11O95390 407 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 CHMP4BP1P59074 171 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 DTHD1Q6ZMT9 781 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 IGSF22Q8N9C0 903 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 TCEAL9Q9UHQ7 104 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 ERVV-1B6SEH8 477 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 PLCD1P51178 756 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 TDRD12Q587J7 1177 aaKnown RBP13.22□□□□□ -0.29
DDR1-227ENST00000376570 GDAQ9Y2T3 454 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 CUTAO60888 179 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 MMP1P03956 469 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 LDHCP07864 332 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 PDIA4P13667 645 aaKnown RBP13.22□□□□□ -0.29
DDR1-227ENST00000376570 CASQ1P31415 396 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 TERF1P54274 439 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 LRRC41Q15345 812 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 NBPF11Q86T75 865 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 PLCD3Q8N3E9 789 aa13.22□□□□□ -0.29
DDR1-227ENST00000376570 DCP1AQ9NPI6 582 aaPredicted RBP13.22□□□□□ -0.29
DDR1-227ENST00000376570 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.29
DDR1-227ENST00000376570 UBE2SQ16763 222 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms