RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 APOA5Q6Q788 366 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 TMOD4Q9NZQ9 345 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 SCNN1DP51172 638 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 VAV2P52735 878 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 BIRC3Q13489 604 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 ATP8A2Q9NTI2 1148 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 TBC1D7Q9P0N9 293 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 IKBKGQ9Y6K9 419 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 DOK7Q18PE1 504 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 VWA3BQ502W6 1294 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 DPH6Q7L8W6 267 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 TMTC1Q8IUR5 882 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.22■□□□□ 0.03
C9orf47-203ENST00000375851 GOLGA8HP0CJ92 632 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 GRM1Q13255 1194 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 MTX1Q13505 466 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 OSBP2Q969R2 916 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 ERO1AQ96HE7 468 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 FNBP1Q96RU3 617 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 NUP58Q9BVL2 599 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 TSGA10Q9BZW7 698 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 ATP6V0A2Q9Y487 856 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 HARSP12081 509 aaKnown RBP15.22■□□□□ 0.03
C9orf47-203ENST00000375851 INF2Q27J81 1249 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 NIM1KQ8IY84 436 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 FLAD1Q8NFF5 587 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 PI4K2BQ8TCG2 481 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 ERVV-1B6SEH8 477 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 DDX39AO00148 427 aaKnown RBP15.22■□□□□ 0.03
C9orf47-203ENST00000375851 ADD2P35612 726 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 AXIN2Q9Y2T1 843 aa15.22■□□□□ 0.03
C9orf47-203ENST00000375851 OPA1O60313 960 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 PCP11498 1178 aaKnown RBP15.21■□□□□ 0.03
C9orf47-203ENST00000375851 PPP2R3AQ06190 1150 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 MAEAQ7L5Y9 396 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 NELFCDQ8IXH7 590 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 IFT81Q8WYA0 676 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 ZBTB9Q96C00 473 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 M0R2C6 588 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 FAM182BQ5T319 152 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 GAS2L3Q86XJ1 694 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 DDX12PQ92771 950 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 CLIC6Q96NY7 704 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 CEP83Q9Y592 693 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 TRPM1Q7Z4N2 1603 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 BRINP3Q76B58 766 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 NSUN7Q8NE18 718 aaKnown RBP15.21■□□□□ 0.03
C9orf47-203ENST00000375851 NAPGQ99747 312 aaPredicted RBP15.21■□□□□ 0.03
C9orf47-203ENST00000375851 HOMER2Q9NSB8 354 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 STK24Q9Y6E0 443 aa15.21■□□□□ 0.03
C9orf47-203ENST00000375851 H7C1W4 665 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 SEMA3EO15041 775 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 CALUO43852 315 aaPredicted RBP15.2■□□□□ 0.02
C9orf47-203ENST00000375851 TNNC1P63316 161 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 GRIPAP1Q4V328 841 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 SPECC1LQ69YQ0 1117 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 CCDC50Q8IVM0 306 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 LRRC47Q8N1G4 583 aaKnown RBP15.2■□□□□ 0.02
C9orf47-203ENST00000375851 GPKOWQ92917 476 aaPredicted RBP eCLIP15.2■□□□□ 0.02
C9orf47-203ENST00000375851 VTI1AQ96AJ9 217 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 SPATA31A3Q5VYP0 1347 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 IGKV5-2P06315 115 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 CCDC84Q86UT8 332 aaPredicted RBP15.2■□□□□ 0.02
C9orf47-203ENST00000375851 CCDC77Q9BR77 488 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 LEMD3Q9Y2U8 911 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 CLIC4Q9Y696 253 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 ZNF335Q9H4Z2 1342 aaPredicted RBP15.2■□□□□ 0.02
C9orf47-203ENST00000375851 DDAH1O94760 285 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 PUS7LQ9H0K6 701 aaKnown RBP15.2■□□□□ 0.02
C9orf47-203ENST00000375851 XDHP47989 1333 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 RIOK3O14730 519 aaKnown RBP15.2■□□□□ 0.02
C9orf47-203ENST00000375851 TNFAIP3P21580 790 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 NDUFA8P51970 172 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 ERFEQ4G0M1 354 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 GSTA5Q7RTV2 222 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 CHURC1Q8WUH1 139 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 NT5C3AQ9H0P0 336 aa15.2■□□□□ 0.02
C9orf47-203ENST00000375851 FRMPD2Q68DX3 1309 aaPredicted RBP15.2■□□□□ 0.02
C9orf47-203ENST00000375851 ZBED4O75132 1171 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 ZNF827Q17R98 1081 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 SLC9C1Q4G0N8 1177 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 MYCT1Q8N699 235 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 DKC1O60832 514 aaKnown RBP eCLIP15.19■□□□□ 0.02
C9orf47-203ENST00000375851 MAGEA1P43355 309 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 PRKG1Q13976 671 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 KRBA2Q6ZNG9 492 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 FNBP4Q8N3X1 1017 aaPredicted RBP15.19■□□□□ 0.02
C9orf47-203ENST00000375851 TTLL11Q8NHH1 800 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 KIFC2Q96AC6 838 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 IFT74Q96LB3 600 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 PSTPIP2Q9H939 334 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 RNF17Q9BXT8 1623 aaKnown RBP15.19■□□□□ 0.02
C9orf47-203ENST00000375851 WDR44Q5JSH3 913 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 EPHA10Q5JZY3 1008 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 CARD6Q9BX69 1037 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 RTEL1Q9NZ71 1219 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 A0A1W2PRG0 241 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 C2CD5Q86YS7 1000 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms