RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 RSPH3Q86UC2 560 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 RASEFQ8IZ41 740 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 RIC8AQ9NPQ8 531 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 CCDC13Q8IYE1 715 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 BCAS4Q8TDM0 211 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 KCNG1Q9UIX4 513 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 KRIT1O00522 736 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 VTI1AQ96AJ9 217 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 VPS37BQ9H9H4 285 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 CFAP43Q8NDM7 1665 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 VGLL3A8MV65 326 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 B4E1Z4 1266 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 MBD4O95243 580 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 GUCY2FP51841 1108 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 GCNT3O95395 438 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 IDI1Q13907 227 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 PALM2Q8IXS6 379 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 HYOU1Q9Y4L1 999 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 GOLGA8QA0A0J9YX86 632 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 GOLGA8OA6NCC3 632 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 GOLGA8NF8WBI6 632 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 KRT3P12035 628 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 PAXIP1Q6ZW49 1069 aaPredicted RBP10.85□□□□□ -0.67
SPEN-201ENST00000375759 SNX14Q9Y5W7 946 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 MAPKBP1O60336 1514 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 WHAMMQ8TF30 809 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 HAUS1Q96CS2 278 aa10.85□□□□□ -0.67
SPEN-201ENST00000375759 ADAMTS2O95450 1211 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 RRAGAQ7L523 313 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 SPATS2LQ9NUQ6 558 aaKnown RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 CLTAP09496 248 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 GABPAQ06546 454 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 HERC4Q5GLZ8 1057 aaPredicted RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 KRT25Q7Z3Z0 450 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 SDCCAG3Q96C92 435 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 RPAINQ86UA6 219 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 LRRC8AQ8IWT6 810 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 ZC3H12CQ9C0D7 883 aaKnown RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 PPP1R9AQ9ULJ8 1098 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 TPX2Q9ULW0 747 aaKnown RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 KDM3AQ9Y4C1 1321 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 SGSM2O43147 1006 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 CDC37L1Q7L3B6 337 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 EFCAB13Q8IY85 973 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 SSH2Q76I76 1423 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 ADALQ6DHV7 355 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 APPBP2Q92624 585 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 FAF1Q9UNN5 650 aaPredicted RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 PUM3Q15397 648 aaKnown RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 LONRF3Q496Y0 759 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 RBM26Q5T8P6 1007 aaKnown RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 DIS3L2Q8IYB7 885 aaKnown RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 RUNDC3BQ96NL0 473 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 NT5C3AQ9H0P0 336 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 IRS4O14654 1257 aaPredicted RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 SUN1O94901 812 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 XRCC5P13010 732 aaKnown RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 TCP1P17987 556 aaKnown RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 YWHAEP62258 255 aaKnown RBP10.84□□□□□ -0.67
SPEN-201ENST00000375759 NGLY1Q96IV0 654 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 ARHGEF12Q9NZN5 1544 aa10.84□□□□□ -0.67
SPEN-201ENST00000375759 GADD45BO75293 160 aaPredicted RBP10.83□□□□□ -0.68
SPEN-201ENST00000375759 CPA1P15085 419 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 TPTE2Q6XPS3 522 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 STAT1P42224 750 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 RIMS2Q9UQ26 1411 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 THAP12O43422 761 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 ADKP55263 362 aaKnown RBP10.83□□□□□ -0.68
SPEN-201ENST00000375759 TSC1Q92574 1164 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 RABGGTAQ92696 567 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 ZBTB7BO15156 539 aaPredicted RBP10.83□□□□□ -0.68
SPEN-201ENST00000375759 ANKRD42Q8N9B4 389 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 EPS15L1Q9UBC2 864 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 AK9Q5TCS8 1911 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 ATP8B1O43520 1251 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 BAG2O95816 211 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 P4HA1P13674 534 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 TXKP42681 527 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 DNM2P50570 870 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 CWF19L2Q2TBE0 894 aaKnown RBP10.83□□□□□ -0.68
SPEN-201ENST00000375759 SNX29Q8TEQ0 813 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 KCNJ18B7U540 433 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 HARSP12081 509 aaKnown RBP10.83□□□□□ -0.68
SPEN-201ENST00000375759 KCNJ12Q14500 433 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 CCDC93Q567U6 631 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 RASIP1Q5U651 963 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 TEKT1Q969V4 418 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 IWS1Q96ST2 819 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 V9GY48 417 aaPredicted RBP10.83□□□□□ -0.68
SPEN-201ENST00000375759 KCNK3O14649 394 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 TRIM37O94972 964 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 PPP2R5DQ14738 602 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 MUM1L1Q5H9M0 696 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 MYCT1Q8N699 235 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 BANK1Q8NDB2 785 aa10.83□□□□□ -0.68
SPEN-201ENST00000375759 ATP1A2P50993 1020 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms