RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 ACER1Q8TDN7 264 aa23.96■■□□□ 1.43
C6orf48-205ENST00000375640 P2RX7Q99572 595 aaKnown RBP23.96■■□□□ 1.43
C6orf48-205ENST00000375640 PATL2C9JE40 543 aaKnown RBP23.95■■□□□ 1.42
C6orf48-205ENST00000375640 M0R2C6 588 aa23.95■■□□□ 1.42
C6orf48-205ENST00000375640 ZMYM1Q5SVZ6 1142 aa23.95■■□□□ 1.42
C6orf48-205ENST00000375640 CHD1LQ86WJ1 897 aa23.95■■□□□ 1.42
C6orf48-205ENST00000375640 TICAM2Q86XR7 235 aa23.95■■□□□ 1.42
C6orf48-205ENST00000375640 NUCB1Q02818 461 aa23.94■■□□□ 1.42
C6orf48-205ENST00000375640 RAET1EQ8TD07 263 aa23.94■■□□□ 1.42
C6orf48-205ENST00000375640 GTF3C2Q8WUA4 911 aaPredicted RBP23.94■■□□□ 1.42
C6orf48-205ENST00000375640 ZNF333Q96JL9 665 aa23.94■■□□□ 1.42
C6orf48-205ENST00000375640 MORF4L1Q9UBU8 362 aa23.94■■□□□ 1.42
C6orf48-205ENST00000375640 MYPNQ86TC9 1320 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 USP17L15C9J2P7 530 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 USP17L13C9JLJ4 530 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 USP17L11C9JVI0 530 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 USP17L18D6R9N7 530 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 USP17L22D6RA61 530 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 USP17L17D6RBQ6 530 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 USP17L19D6RCP7 530 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 USP17L20D6RJB6 530 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 SMIM22K7EJ46 135 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 APPP05067 770 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 AKR1B1P15121 316 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 HERVK_113P62684 666 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 USP17L24Q0WX57 530 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 CDK5RAP2Q96SN8 1893 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 PHIPQ8WWQ0 1821 aa23.93■■□□□ 1.42
C6orf48-205ENST00000375640 TNPO2O14787 897 aaKnown RBP23.92■■□□□ 1.42
C6orf48-205ENST00000375640 PRKCZQ05513 592 aa23.92■■□□□ 1.42
C6orf48-205ENST00000375640 ZYXQ15942 572 aaKnown RBP23.92■■□□□ 1.42
C6orf48-205ENST00000375640 COA7Q96BR5 231 aa23.92■■□□□ 1.42
C6orf48-205ENST00000375640 SEC62Q99442 399 aaKnown RBP23.92■■□□□ 1.42
C6orf48-205ENST00000375640 NACAP1Q9BZK3 213 aa23.92■■□□□ 1.42
C6orf48-205ENST00000375640 A0A1W2PRG0 241 aa23.91■■□□□ 1.42
C6orf48-205ENST00000375640 MINDY4BA8MYZ0 360 aa23.91■■□□□ 1.42
C6orf48-205ENST00000375640 CATSPERGQ6ZRH7 1159 aa23.91■■□□□ 1.42
C6orf48-205ENST00000375640 IFNL3Q8IZI9 196 aa23.91■■□□□ 1.42
C6orf48-205ENST00000375640 TMEM106CQ9BVX2 250 aa23.91■■□□□ 1.42
C6orf48-205ENST00000375640 VCAM1P19320 739 aa23.9■■□□□ 1.42
C6orf48-205ENST00000375640 TDO2P48775 406 aa23.9■■□□□ 1.42
C6orf48-205ENST00000375640 SIAH1Q8IUQ4 282 aa23.9■■□□□ 1.42
C6orf48-205ENST00000375640 GPRC5AQ8NFJ5 357 aa23.9■■□□□ 1.42
C6orf48-205ENST00000375640 SH3TC2Q8TF17 1288 aa23.9■■□□□ 1.42
C6orf48-205ENST00000375640 KANSL2Q9H9L4 492 aa23.9■■□□□ 1.42
C6orf48-205ENST00000375640 ARHGEF10LQ9HCE6 1279 aa23.9■■□□□ 1.42
C6orf48-205ENST00000375640 EPB41L4AQ9HCS5 686 aaPredicted RBP23.9■■□□□ 1.42
C6orf48-205ENST00000375640 RBPJLQ9UBG7 517 aa23.9■■□□□ 1.42
C6orf48-205ENST00000375640 MYH1P12882 1939 aa23.9■■□□□ 1.42
C6orf48-205ENST00000375640 GRK4P32298 578 aa23.89■■□□□ 1.41
C6orf48-205ENST00000375640 FLT3LGP49771 235 aa23.89■■□□□ 1.41
C6orf48-205ENST00000375640 ICA1Q05084 483 aa23.89■■□□□ 1.41
C6orf48-205ENST00000375640 OSBPL3Q9H4L5 887 aa23.89■■□□□ 1.41
C6orf48-205ENST00000375640 SH2D4AQ9H788 454 aa23.89■■□□□ 1.41
C6orf48-205ENST00000375640 MKNK2Q9HBH9 465 aa23.89■■□□□ 1.41
C6orf48-205ENST00000375640 ZNF287Q9HBT7 754 aa23.89■■□□□ 1.41
C6orf48-205ENST00000375640 GABRQQ9UN88 632 aa23.89■■□□□ 1.41
C6orf48-205ENST00000375640 TMX2Q9Y320 296 aa23.89■■□□□ 1.41
C6orf48-205ENST00000375640 DDX60LQ5H9U9 1706 aaKnown RBP23.88■■□□□ 1.41
C6orf48-205ENST00000375640 IRF5Q13568 498 aa23.88■■□□□ 1.41
C6orf48-205ENST00000375640 PLEKHM2Q8IWE5 1019 aa23.88■■□□□ 1.41
C6orf48-205ENST00000375640 TXNRD2Q9NNW7 524 aa23.88■■□□□ 1.41
C6orf48-205ENST00000375640 HELLSQ9NRZ9 838 aa23.88■■□□□ 1.41
C6orf48-205ENST00000375640 SLAIN1Q8ND83 568 aa23.87■■□□□ 1.41
C6orf48-205ENST00000375640 LPAR1Q92633 364 aa23.87■■□□□ 1.41
C6orf48-205ENST00000375640 RPAP3Q9H6T3 665 aaPredicted RBP23.87■■□□□ 1.41
C6orf48-205ENST00000375640 RABGAP1Q9Y3P9 1069 aa23.87■■□□□ 1.41
C6orf48-205ENST00000375640 POTEFA5A3E0 1075 aa23.86■■□□□ 1.41
C6orf48-205ENST00000375640 TRIM6-TRIM34B2RNG4 842 aa23.86■■□□□ 1.41
C6orf48-205ENST00000375640 LBX2Q6XYB7 198 aa23.86■■□□□ 1.41
C6orf48-205ENST00000375640 PXYLP1Q8TE99 480 aa23.86■■□□□ 1.41
C6orf48-205ENST00000375640 NAPBQ9H115 298 aa23.86■■□□□ 1.41
C6orf48-205ENST00000375640 HOXC10Q9NYD6 342 aa23.86■■□□□ 1.41
C6orf48-205ENST00000375640 ROBO3Q96MS0 1386 aa23.86■■□□□ 1.41
C6orf48-205ENST00000375640 RASA1P20936 1047 aa23.85■■□□□ 1.41
C6orf48-205ENST00000375640 ERVK-9P63128 1117 aa23.85■■□□□ 1.41
C6orf48-205ENST00000375640 ERVK-24P63145 666 aa23.85■■□□□ 1.41
C6orf48-205ENST00000375640 Q3C1V9 767 aa23.85■■□□□ 1.41
C6orf48-205ENST00000375640 POTEEQ6S8J3 1075 aa23.85■■□□□ 1.41
C6orf48-205ENST00000375640 ZNF444Q8N0Y2 327 aaPredicted RBP23.85■■□□□ 1.41
C6orf48-205ENST00000375640 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.85■■□□□ 1.41
C6orf48-205ENST00000375640 GJD2Q9UKL4 321 aa23.85■■□□□ 1.41
C6orf48-205ENST00000375640 LOC285556D6RIA3 1793 aa23.85■■□□□ 1.41
C6orf48-205ENST00000375640 PTPRFP10586 1907 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 NAV1Q8NEY1 1877 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 ADCY3O60266 1144 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 SLC3A2P08195 630 aaKnown RBP23.84■■□□□ 1.41
C6orf48-205ENST00000375640 EEF2P13639 858 aaKnown RBP23.84■■□□□ 1.41
C6orf48-205ENST00000375640 MAPK4P31152 587 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 UBXN2AP68543 259 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 IRX6P78412 446 aaPredicted RBP23.84■■□□□ 1.41
C6orf48-205ENST00000375640 COG2Q14746 738 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 MCMDC2Q4G0Z9 681 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 STK11IPQ8N1F8 1099 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 VCPKMTQ9H867 229 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 BIN2Q9UBW5 565 aaPredicted RBP23.84■■□□□ 1.41
C6orf48-205ENST00000375640 ATAD5Q96QE3 1844 aa23.84■■□□□ 1.41
C6orf48-205ENST00000375640 PEX10O60683 326 aa23.83■■□□□ 1.41
C6orf48-205ENST00000375640 CCNA1P78396 465 aa23.83■■□□□ 1.41
C6orf48-205ENST00000375640 CCDC129Q6ZRS4 1044 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms