RNA–Protein interactions for RNA: ENST00000375472.7

SUSD3-202, Transcript of sushi domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD3, Length 1,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-202ENST00000375472 USP14P54578 494 aa27.32■■□□□ 1.96
SUSD3-202ENST00000375472 MTMR2Q13614 643 aa27.32■■□□□ 1.96
SUSD3-202ENST00000375472 SEPT2Q15019 361 aa27.32■■□□□ 1.96
SUSD3-202ENST00000375472 ZNF444Q8N0Y2 327 aaPredicted RBP27.32■■□□□ 1.96
SUSD3-202ENST00000375472 DSCC1Q9BVC3 393 aa27.32■■□□□ 1.96
SUSD3-202ENST00000375472 HMGCS2P54868 508 aa27.31■■□□□ 1.96
SUSD3-202ENST00000375472 USP17L2Q6R6M4 530 aa27.31■■□□□ 1.96
SUSD3-202ENST00000375472 PARK7Q99497 189 aaKnown RBP27.31■■□□□ 1.96
SUSD3-202ENST00000375472 RASA1P20936 1047 aa27.3■■□□□ 1.96
SUSD3-202ENST00000375472 FEZ1Q99689 392 aa27.3■■□□□ 1.96
SUSD3-202ENST00000375472 KIAA1683Q9H0B3 1180 aa27.3■■□□□ 1.96
SUSD3-202ENST00000375472 KANSL2Q9H9L4 492 aa27.3■■□□□ 1.96
SUSD3-202ENST00000375472 PNMA3Q9UL41 463 aa27.3■■□□□ 1.96
SUSD3-202ENST00000375472 TLR2O60603 784 aa27.29■■□□□ 1.96
SUSD3-202ENST00000375472 C12orf42Q96LP6 360 aa27.29■■□□□ 1.96
SUSD3-202ENST00000375472 SH2D4AQ9H788 454 aa27.29■■□□□ 1.96
SUSD3-202ENST00000375472 ARHGEF10LQ9HCE6 1279 aa27.29■■□□□ 1.96
SUSD3-202ENST00000375472 CTNNA3Q9UI47 895 aa27.29■■□□□ 1.96
SUSD3-202ENST00000375472 PCP11498 1178 aaKnown RBP27.28■■□□□ 1.96
SUSD3-202ENST00000375472 ICA1Q05084 483 aa27.28■■□□□ 1.96
SUSD3-202ENST00000375472 STK11IPQ8N1F8 1099 aa27.28■■□□□ 1.96
SUSD3-202ENST00000375472 R3HDMLQ9H3Y0 253 aa27.28■■□□□ 1.96
SUSD3-202ENST00000375472 LOC285556D6RIA3 1793 aa27.27■■□□□ 1.96
SUSD3-202ENST00000375472 FKTNO75072 461 aa27.27■■□□□ 1.96
SUSD3-202ENST00000375472 OSBPP22059 807 aa27.26■■□□□ 1.95
SUSD3-202ENST00000375472 SKAP1Q86WV1 359 aa27.26■■□□□ 1.95
SUSD3-202ENST00000375472 ZNF296Q8WUU4 475 aaPredicted RBP27.26■■□□□ 1.95
SUSD3-202ENST00000375472 ZNF213O14771 459 aa27.25■■□□□ 1.95
SUSD3-202ENST00000375472 SGSM2O43147 1006 aa27.25■■□□□ 1.95
SUSD3-202ENST00000375472 PRDM1O75626 825 aa27.25■■□□□ 1.95
SUSD3-202ENST00000375472 FGRP09769 529 aa27.25■■□□□ 1.95
SUSD3-202ENST00000375472 HOXA7P31268 230 aaPredicted RBP27.25■■□□□ 1.95
SUSD3-202ENST00000375472 NT5C2P49902 561 aa27.25■■□□□ 1.95
SUSD3-202ENST00000375472 CTDSPL2Q05D32 466 aa27.25■■□□□ 1.95
SUSD3-202ENST00000375472 TREML2Q5T2D2 321 aa27.25■■□□□ 1.95
SUSD3-202ENST00000375472 ACER1Q8TDN7 264 aa27.25■■□□□ 1.95
SUSD3-202ENST00000375472 EMILIN3Q9NT22 766 aa27.25■■□□□ 1.95
SUSD3-202ENST00000375472 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.25■■□□□ 1.95
SUSD3-202ENST00000375472 ORC4O43929 436 aa27.24■■□□□ 1.95
SUSD3-202ENST00000375472 TSPY3P0CV98 308 aa27.24■■□□□ 1.95
SUSD3-202ENST00000375472 TSPY8P0CW00 308 aa27.24■■□□□ 1.95
SUSD3-202ENST00000375472 PPP4R3BQ5MIZ7 849 aa27.24■■□□□ 1.95
SUSD3-202ENST00000375472 NEDD1Q8NHV4 660 aa27.24■■□□□ 1.95
SUSD3-202ENST00000375472 RNF41Q9H4P4 317 aaPredicted RBP27.24■■□□□ 1.95
SUSD3-202ENST00000375472 TMX2Q9Y320 296 aa27.24■■□□□ 1.95
SUSD3-202ENST00000375472 PLIN4Q96Q06 1357 aa27.23■■□□□ 1.95
SUSD3-202ENST00000375472 SP3Q02447 781 aa27.23■■□□□ 1.95
SUSD3-202ENST00000375472 CASC1Q6TDU7 716 aa27.23■■□□□ 1.95
SUSD3-202ENST00000375472 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.23■■□□□ 1.95
SUSD3-202ENST00000375472 IL25Q9H293 177 aa27.23■■□□□ 1.95
SUSD3-202ENST00000375472 A0A1W2PRG0 241 aa27.22■■□□□ 1.95
SUSD3-202ENST00000375472 EEF2P13639 858 aaKnown RBP27.22■■□□□ 1.95
SUSD3-202ENST00000375472 TFAP4Q01664 338 aa27.22■■□□□ 1.95
SUSD3-202ENST00000375472 IMMTQ16891 758 aaKnown RBP27.22■■□□□ 1.95
SUSD3-202ENST00000375472 COL13A1Q5TAT6 717 aaPredicted RBP27.22■■□□□ 1.95
SUSD3-202ENST00000375472 C17orf99Q6UX52 265 aa27.22■■□□□ 1.95
SUSD3-202ENST00000375472 SIAH1Q8IUQ4 282 aa27.22■■□□□ 1.95
SUSD3-202ENST00000375472 SMCR8Q8TEV9 937 aaPredicted RBP27.22■■□□□ 1.95
SUSD3-202ENST00000375472 LPAR1Q92633 364 aa27.22■■□□□ 1.95
SUSD3-202ENST00000375472 ERO1AQ96HE7 468 aa27.22■■□□□ 1.95
SUSD3-202ENST00000375472 NYAP2Q9P242 653 aa27.22■■□□□ 1.95
SUSD3-202ENST00000375472 CASP8AP2Q9UKL3 1982 aa27.22■■□□□ 1.95
SUSD3-202ENST00000375472 GREB1LQ9C091 1923 aaPredicted RBP27.22■■□□□ 1.95
SUSD3-202ENST00000375472 ADGRA2Q96PE1 1338 aa27.21■■□□□ 1.95
SUSD3-202ENST00000375472 IGKV6D-41A0A0C4DH26 115 aa27.21■■□□□ 1.95
SUSD3-202ENST00000375472 CYP2C8P10632 490 aa27.21■■□□□ 1.95
SUSD3-202ENST00000375472 IRX3P78415 501 aaPredicted RBP27.21■■□□□ 1.95
SUSD3-202ENST00000375472 DGKZQ13574 1117 aa27.21■■□□□ 1.95
SUSD3-202ENST00000375472 ARHGEF6Q15052 776 aa27.21■■□□□ 1.95
SUSD3-202ENST00000375472 ZYXQ15942 572 aaKnown RBP27.21■■□□□ 1.95
SUSD3-202ENST00000375472 AKNAD1Q5T1N1 836 aa27.21■■□□□ 1.95
SUSD3-202ENST00000375472 MFSD6Q6ZSS7 791 aa27.21■■□□□ 1.95
SUSD3-202ENST00000375472 STAG1Q8WVM7 1258 aa27.21■■□□□ 1.95
SUSD3-202ENST00000375472 SYNPO2Q9UMS6 1093 aa27.21■■□□□ 1.95
SUSD3-202ENST00000375472 TSPY2A6NKD2 308 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 USP17L15C9J2P7 530 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 USP17L13C9JLJ4 530 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 USP17L11C9JVI0 530 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 USP17L18D6R9N7 530 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 USP17L22D6RA61 530 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 USP17L17D6RBQ6 530 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 USP17L19D6RCP7 530 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 USP17L20D6RJB6 530 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 GCLCP48506 637 aaPredicted RBP27.2■■□□□ 1.94
SUSD3-202ENST00000375472 HAND2P61296 217 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 USP17L24Q0WX57 530 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 KIAA1211Q6ZU35 1233 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 ASCC2Q9H1I8 757 aaPredicted RBP27.2■■□□□ 1.94
SUSD3-202ENST00000375472 VCPKMTQ9H867 229 aa27.2■■□□□ 1.94
SUSD3-202ENST00000375472 VCAM1P19320 739 aa27.19■■□□□ 1.94
SUSD3-202ENST00000375472 ATP2B2Q01814 1243 aa27.19■■□□□ 1.94
SUSD3-202ENST00000375472 GTF3C2Q8WUA4 911 aaPredicted RBP27.19■■□□□ 1.94
SUSD3-202ENST00000375472 GOPCQ9HD26 462 aa27.19■■□□□ 1.94
SUSD3-202ENST00000375472 MTMR4Q9NYA4 1195 aa27.19■■□□□ 1.94
SUSD3-202ENST00000375472 U3KPZ7 1027 aaPredicted RBP27.19■■□□□ 1.94
SUSD3-202ENST00000375472 RANBP6O60518 1105 aaKnown RBP27.18■■□□□ 1.94
SUSD3-202ENST00000375472 CDC45O75419 566 aa27.18■■□□□ 1.94
SUSD3-202ENST00000375472 TTLL1O95922 423 aa27.18■■□□□ 1.94
SUSD3-202ENST00000375472 KIF22Q14807 665 aa27.18■■□□□ 1.94
SUSD3-202ENST00000375472 FAM47AQ5JRC9 791 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms