RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 HELLSQ9NRZ9 838 aa21.93■■□□□ 1.1
COL15A1-201ENST00000375001 JAK2O60674 1132 aa21.93■■□□□ 1.1
COL15A1-201ENST00000375001 WWC3Q9ULE0 1092 aa21.93■■□□□ 1.1
COL15A1-201ENST00000375001 ABTB1Q969K4 478 aaPredicted RBP21.93■■□□□ 1.1
COL15A1-201ENST00000375001 AOX1Q06278 1338 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 KLHL30Q0D2K2 578 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 DBNDD2Q9BQY9 259 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 STX10O60499 249 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 IFT88Q13099 833 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 PPFIA2O75334 1257 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 TRAF1Q13077 416 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 TYW1BQ6NUM6 668 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 RASEFQ8IZ41 740 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 GPT2Q8TD30 523 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 RAB17Q9H0T7 212 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 LARSQ9P2J5 1176 aaKnown RBP21.92■■□□□ 1.1
COL15A1-201ENST00000375001 ETF1P62495 437 aaKnown RBP21.92■■□□□ 1.1
COL15A1-201ENST00000375001 Q9H521 79 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 JRKLQ9Y4A0 524 aa21.92■■□□□ 1.1
COL15A1-201ENST00000375001 PPP2R5CQ13362 524 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 CUTAO60888 179 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 DBN1Q16643 649 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 WDR44Q5JSH3 913 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 EFCAB13Q8IY85 973 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 LLPHQ9BRT6 129 aaKnown RBP21.91■■□□□ 1.1
COL15A1-201ENST00000375001 USTQ9Y2C2 406 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 NDUFB9Q9Y6M9 179 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 MAGEB6P1A0A0J9YX57 407 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 GIPC1O14908 333 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 HINFPQ9BQA5 517 aa21.91■■□□□ 1.1
COL15A1-201ENST00000375001 JPH2Q9BR39 696 aaPredicted RBP21.91■■□□□ 1.1
COL15A1-201ENST00000375001 SYCE1Q8N0S2 351 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
COL15A1-201ENST00000375001 USP19O94966 1318 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 SEC31AO94979 1220 aaKnown RBP21.9■■□□□ 1.1
COL15A1-201ENST00000375001 ADAMTS2O95450 1211 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 LONRF2Q1L5Z9 754 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 LIN9Q5TKA1 542 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 CTTNBP2Q8WZ74 1663 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 B4E1Z4 1266 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 TNNI3KQ59H18 835 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 FPGT-TNNI3KV9GXZ4 949 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 MAN1A1P33908 653 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 KCTD16Q68DU8 428 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 PALD1Q9ULE6 856 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 PPP2R2CQ9Y2T4 447 aa21.9■■□□□ 1.1
COL15A1-201ENST00000375001 TTLL12Q14166 644 aaPredicted RBP21.89■■□□□ 1.1
COL15A1-201ENST00000375001 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.89■■□□□ 1.1
COL15A1-201ENST00000375001 POSTNQ15063 836 aa21.89■■□□□ 1.09
COL15A1-201ENST00000375001 TCP11Q8WWU5 503 aa21.89■■□□□ 1.09
COL15A1-201ENST00000375001 FLOT1O75955 427 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 PICALMQ13492 652 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 UHMK1Q8TAS1 419 aaKnown RBP21.88■■□□□ 1.09
COL15A1-201ENST00000375001 PARP2Q9UGN5 583 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 FAM170AA1A519 330 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 ME3Q16798 604 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 PIK3AP1Q6ZUJ8 805 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 CCDC13Q8IYE1 715 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 HAUS7Q99871 368 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 FAM207AQ9NSI2 230 aaPredicted RBP21.88■■□□□ 1.09
COL15A1-201ENST00000375001 AFG3L2Q9Y4W6 797 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 HOXC9P31274 260 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 CASC4Q6P4E1 433 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 FNBP1Q96RU3 617 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 RNMTO43148 476 aaKnown RBP21.88■■□□□ 1.09
COL15A1-201ENST00000375001 POLE2P56282 527 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 HSP90AA5PQ58FG0 334 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 SFMBT2Q5VUG0 894 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 RRAGAQ7L523 313 aa21.88■■□□□ 1.09
COL15A1-201ENST00000375001 WDR62O43379 1518 aa21.87■■□□□ 1.09
COL15A1-201ENST00000375001 NELFBQ8WX92 580 aa21.87■■□□□ 1.09
COL15A1-201ENST00000375001 GNAT2P19087 354 aa21.87■■□□□ 1.09
COL15A1-201ENST00000375001 CTAGE3PQ8IX95 158 aa21.87■■□□□ 1.09
COL15A1-201ENST00000375001 TNRQ92752 1358 aa21.87■■□□□ 1.09
COL15A1-201ENST00000375001 DNMT1P26358 1616 aaKnown RBP21.87■■□□□ 1.09
COL15A1-201ENST00000375001 LRRC8AQ8IWT6 810 aa21.87■■□□□ 1.09
COL15A1-201ENST00000375001 SERPINB6P35237 376 aa21.87■■□□□ 1.09
COL15A1-201ENST00000375001 C2CD5Q86YS7 1000 aa21.87■■□□□ 1.09
COL15A1-201ENST00000375001 EFCC1Q9HA90 598 aa21.87■■□□□ 1.09
COL15A1-201ENST00000375001 LRRC23Q53EV4 343 aaPredicted RBP21.86■■□□□ 1.09
COL15A1-201ENST00000375001 TRIM58Q8NG06 486 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 DPH5Q9H2P9 285 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 NLRC4Q9NPP4 1024 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 PYCARDQ9ULZ3 195 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 SHANK2Q9UPX8 1470 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 A0A087WUV0 522 aaPredicted RBP21.86■■□□□ 1.09
COL15A1-201ENST00000375001 DIS3L2Q8IYB7 885 aaKnown RBP21.86■■□□□ 1.09
COL15A1-201ENST00000375001 N4BP2L2Q92802 583 aaPredicted RBP21.86■■□□□ 1.09
COL15A1-201ENST00000375001 MCM9Q9NXL9 1143 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 STAMQ92783 540 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 MRFAP1L1Q96HT8 127 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 MBD4O95243 580 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 HARSP12081 509 aaKnown RBP21.86■■□□□ 1.09
COL15A1-201ENST00000375001 P3H4Q92791 437 aa21.86■■□□□ 1.09
COL15A1-201ENST00000375001 KCNK3O14649 394 aa21.85■■□□□ 1.09
COL15A1-201ENST00000375001 MYO1AQ9UBC5 1043 aa21.85■■□□□ 1.09
COL15A1-201ENST00000375001 HYOU1Q9Y4L1 999 aa21.85■■□□□ 1.09
COL15A1-201ENST00000375001 SPATA31E1Q6ZUB1 1445 aa21.85■■□□□ 1.09
COL15A1-201ENST00000375001 CCDC93Q567U6 631 aa21.85■■□□□ 1.09
COL15A1-201ENST00000375001 KRIT1O00522 736 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms