RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CCDC82Q8N4S0 544 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 FSIP1Q8NA03 581 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 C7orf43Q8WVR3 580 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 KAT14Q9H8E8 782 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 TTF2Q9UNY4 1162 aaKnown RBP20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PPP6R2O75170 966 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 TSPY3P0CV98 308 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 TSPY8P0CW00 308 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 KIF5BP33176 963 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PTPAQ15257 358 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 SLC4A8Q2Y0W8 1093 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CC2D2BQ6DHV5 1058 aa20.8■□□□□ 0.92
HLA-DQB1-201ENST00000374943 GREB1LQ9C091 1923 aaPredicted RBP20.79■□□□□ 0.92
HLA-DQB1-201ENST00000374943 BAZ2BQ9UIF8 2168 aaKnown RBP20.79■□□□□ 0.92
HLA-DQB1-201ENST00000374943 G3V3G9 751 aa20.79■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CDK8P49336 464 aa20.79■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CAMK4Q16566 473 aa20.79■□□□□ 0.92
HLA-DQB1-201ENST00000374943 DCAF8Q5TAQ9 597 aa20.79■□□□□ 0.92
HLA-DQB1-201ENST00000374943 JMYQ8N9B5 988 aa20.79■□□□□ 0.92
HLA-DQB1-201ENST00000374943 FBXW7Q969H0 707 aa20.79■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PLIN4Q96Q06 1357 aa20.79■□□□□ 0.92
HLA-DQB1-201ENST00000374943 BTBD18B2RXH4 712 aa20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 CHRNA5P30532 468 aa20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 TYRO3Q06418 890 aa20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 AXDND1Q5T1B0 1012 aaPredicted RBP20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 FMR1NBQ8N0W7 255 aaPredicted RBP20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 SRBD1Q8N5C6 995 aaKnown RBP20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 SLC44A5Q8NCS7 719 aa20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PHF20Q9BVI0 1012 aa20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 MRIQ9BWK5 157 aa20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 KCNJ14Q9UNX9 436 aa20.78■□□□□ 0.92
HLA-DQB1-201ENST00000374943 GRM4Q14833 912 aa20.77■□□□□ 0.92
HLA-DQB1-201ENST00000374943 STRIP1Q5VSL9 837 aa20.77■□□□□ 0.92
HLA-DQB1-201ENST00000374943 PNMA1Q8ND90 353 aa20.77■□□□□ 0.92
HLA-DQB1-201ENST00000374943 NEDD1Q8NHV4 660 aa20.77■□□□□ 0.92
HLA-DQB1-201ENST00000374943 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.77■□□□□ 0.92
HLA-DQB1-201ENST00000374943 SIPA1L1O43166 1804 aa20.77■□□□□ 0.91
HLA-DQB1-201ENST00000374943 KINO60870 393 aaKnown RBP20.77■□□□□ 0.91
HLA-DQB1-201ENST00000374943 RILPL1Q5EBL4 403 aa20.77■□□□□ 0.91
HLA-DQB1-201ENST00000374943 TEKT1Q969V4 418 aa20.77■□□□□ 0.91
HLA-DQB1-201ENST00000374943 SHISA4Q96DD7 197 aa20.77■□□□□ 0.91
HLA-DQB1-201ENST00000374943 V9GY48 417 aaPredicted RBP20.77■□□□□ 0.91
HLA-DQB1-201ENST00000374943 USP17L3A6NCW0 530 aa20.76■□□□□ 0.91
HLA-DQB1-201ENST00000374943 USP17L4A6NCW7 530 aa20.76■□□□□ 0.91
HLA-DQB1-201ENST00000374943 WDHD1O75717 1129 aaPredicted RBP20.76■□□□□ 0.91
HLA-DQB1-201ENST00000374943 CMA1P23946 247 aa20.76■□□□□ 0.91
HLA-DQB1-201ENST00000374943 NOVP48745 357 aa20.76■□□□□ 0.91
HLA-DQB1-201ENST00000374943 USP17L1Q7RTZ2 530 aa20.76■□□□□ 0.91
HLA-DQB1-201ENST00000374943 DBNDD1Q9H9R9 158 aa20.76■□□□□ 0.91
HLA-DQB1-201ENST00000374943 MRVI1Q9Y6F6 885 aa20.76■□□□□ 0.91
HLA-DQB1-201ENST00000374943 MORC2Q9Y6X9 1032 aaPredicted RBP20.76■□□□□ 0.91
HLA-DQB1-201ENST00000374943 MYO3BQ8WXR4 1341 aa20.75■□□□□ 0.91
HLA-DQB1-201ENST00000374943 F8W031 263 aaPredicted RBP20.75■□□□□ 0.91
HLA-DQB1-201ENST00000374943 GNAQP50148 359 aa20.75■□□□□ 0.91
HLA-DQB1-201ENST00000374943 HDLBPQ00341 1268 aaKnown RBP20.75■□□□□ 0.91
HLA-DQB1-201ENST00000374943 GABPAQ06546 454 aa20.75■□□□□ 0.91
HLA-DQB1-201ENST00000374943 GRIPAP1Q4V328 841 aa20.75■□□□□ 0.91
HLA-DQB1-201ENST00000374943 CKAP2LQ8IYA6 745 aa20.75■□□□□ 0.91
HLA-DQB1-201ENST00000374943 SUPT20HQ8NEM7 779 aa20.75■□□□□ 0.91
HLA-DQB1-201ENST00000374943 MXD3Q9BW11 206 aa20.75■□□□□ 0.91
HLA-DQB1-201ENST00000374943 FAM237AA0A1B0GTK4 181 aa20.74■□□□□ 0.91
HLA-DQB1-201ENST00000374943 ECE2O60344 883 aa20.74■□□□□ 0.91
HLA-DQB1-201ENST00000374943 PFKFB3Q16875 520 aaPredicted RBP20.74■□□□□ 0.91
HLA-DQB1-201ENST00000374943 DACT2Q5SW24 774 aa20.74■□□□□ 0.91
HLA-DQB1-201ENST00000374943 FAM200AQ8TCP9 573 aa20.74■□□□□ 0.91
HLA-DQB1-201ENST00000374943 ZDHHC15Q96MV8 337 aa20.74■□□□□ 0.91
HLA-DQB1-201ENST00000374943 VPS54Q9P1Q0 977 aa20.74■□□□□ 0.91
HLA-DQB1-201ENST00000374943 CAVIN2O95810 425 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 SCG2P13521 617 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 KRT2P35908 639 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 TOB1P50616 345 aaPredicted RBP20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 KIAA2012Q0VF49 1180 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 APOBEC3HQ6NTF7 200 aaKnown RBP20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 SASS6Q6UVJ0 657 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 TRIM44Q96DX7 344 aaPredicted RBP20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 TMEM47Q9BQJ4 181 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 USP40Q9NVE5 1235 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 MYH4Q9Y623 1939 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 CUTAO60888 179 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 NDUFA8P51970 172 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 NR5A1Q13285 461 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 CDC42EP5Q6NZY7 148 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 FAM43AQ8N2R8 423 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 SLC16A10Q8TF71 515 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 DDX4Q9NQI0 724 aaKnown RBP20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 MAD2L2Q9UI95 211 aa20.73■□□□□ 0.91
HLA-DQB1-201ENST00000374943 A0A1B0GVL5 298 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 CRKP46108 304 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 SCNN1DP51172 638 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 NPY5RQ15761 445 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 HS1BP3Q53T59 392 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 OXER1Q8TDS5 423 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 LZTS2Q9BRK4 669 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 OSBPL5Q9H0X9 879 aaPredicted RBP20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 BRMS1Q9HCU9 246 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 SWAP70Q9UH65 585 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 TAOK2Q9UL54 1235 aa20.72■□□□□ 0.91
HLA-DQB1-201ENST00000374943 MARCKSP29966 332 aaPredicted RBP20.71■□□□□ 0.91
HLA-DQB1-201ENST00000374943 FAM177A1Q8N128 213 aaPredicted RBP20.71■□□□□ 0.91
HLA-DQB1-201ENST00000374943 TNFRSF25Q93038 417 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms