RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 IMPACTQ9P2X3 320 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 SPATA31A5Q5VU36 1347 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 SPATA31A7Q8IWB4 1347 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 GRIK5Q16478 980 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 RASGRP2Q7LDG7 609 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 SLC44A5Q8NCS7 719 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 CCDC150Q8NCX0 1101 aa19.49■□□□□ 0.71
RXRB-201ENST00000374680 SAP30BPQ9UHR5 308 aaKnown RBP19.49■□□□□ 0.71
RXRB-201ENST00000374680 SRPRBQ9Y5M8 271 aaKnown RBP19.49■□□□□ 0.71
RXRB-201ENST00000374680 NRDCO43847 1150 aa19.48■□□□□ 0.71
RXRB-201ENST00000374680 PTGDRQ13258 359 aa19.48■□□□□ 0.71
RXRB-201ENST00000374680 DZIP1Q86YF9 867 aaKnown RBP19.48■□□□□ 0.71
RXRB-201ENST00000374680 CTCFLQ8NI51 663 aaPredicted RBP19.48■□□□□ 0.71
RXRB-201ENST00000374680 ANKRD7Q92527 254 aa19.48■□□□□ 0.71
RXRB-201ENST00000374680 DESI2Q9BSY9 194 aa19.48■□□□□ 0.71
RXRB-201ENST00000374680 CDCA7Q9BWT1 371 aaPredicted RBP19.48■□□□□ 0.71
RXRB-201ENST00000374680 BAZ2AQ9UIF9 1905 aaKnown RBP19.48■□□□□ 0.71
RXRB-201ENST00000374680 SMARCC1Q92922 1105 aaPredicted RBP19.48■□□□□ 0.71
RXRB-201ENST00000374680 HOOK1Q9UJC3 728 aaKnown RBP19.48■□□□□ 0.71
RXRB-201ENST00000374680 SF3B3Q15393 1217 aaKnown RBP19.48■□□□□ 0.71
RXRB-201ENST00000374680 RNF26Q9BY78 433 aaPredicted RBP19.48■□□□□ 0.71
RXRB-201ENST00000374680 ZNF804BA4D1E1 1349 aa19.48■□□□□ 0.71
RXRB-201ENST00000374680 DOT1LQ8TEK3 1739 aa19.47■□□□□ 0.71
RXRB-201ENST00000374680 TEX33O43247 280 aa19.47■□□□□ 0.71
RXRB-201ENST00000374680 ERCC6LQ2NKX8 1250 aa19.47■□□□□ 0.71
RXRB-201ENST00000374680 USP17L3A6NCW0 530 aa19.47■□□□□ 0.71
RXRB-201ENST00000374680 USP17L4A6NCW7 530 aa19.47■□□□□ 0.71
RXRB-201ENST00000374680 ACTN4O43707 911 aaKnown RBP19.47■□□□□ 0.71
RXRB-201ENST00000374680 USP5P45974 858 aa19.47■□□□□ 0.71
RXRB-201ENST00000374680 USP17L1Q7RTZ2 530 aa19.47■□□□□ 0.71
RXRB-201ENST00000374680 STAG2Q8N3U4 1231 aa19.47■□□□□ 0.71
RXRB-201ENST00000374680 EEF2KMTQ96G04 330 aa19.47■□□□□ 0.71
RXRB-201ENST00000374680 GOLGA8HP0CJ92 632 aa19.46■□□□□ 0.71
RXRB-201ENST00000374680 CD44P16070 742 aaKnown RBP19.46■□□□□ 0.71
RXRB-201ENST00000374680 TFAP4Q01664 338 aa19.46■□□□□ 0.71
RXRB-201ENST00000374680 FUT2Q10981 343 aa19.46■□□□□ 0.71
RXRB-201ENST00000374680 CRNKL1Q9BZJ0 848 aaKnown RBP19.46■□□□□ 0.71
RXRB-201ENST00000374680 URI1O94763 535 aaPredicted RBP19.46■□□□□ 0.71
RXRB-201ENST00000374680 VSTM4Q8IW00 320 aa19.46■□□□□ 0.71
RXRB-201ENST00000374680 CBFA2T2O43439 604 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 NFIXQ14938 502 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 CLEC4GQ6UXB4 293 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 FBXO33Q7Z6M2 555 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 PHF20Q9BVI0 1012 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 STX8Q9UNK0 236 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 CEP131Q9UPN4 1083 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 RTL9Q8NET4 1388 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 KARSQ15046 597 aaKnown RBP19.45■□□□□ 0.7
RXRB-201ENST00000374680 TTC38Q5R3I4 469 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 EPC1Q9H2F5 836 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 MTF1Q14872 753 aa19.45■□□□□ 0.7
RXRB-201ENST00000374680 PRPF3O43395 683 aaKnown RBP19.44■□□□□ 0.7
RXRB-201ENST00000374680 TPTE2Q6XPS3 522 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 TMTC3Q6ZXV5 915 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 ARHGEF1Q92888 912 aaKnown RBP19.44■□□□□ 0.7
RXRB-201ENST00000374680 MKNK2Q9HBH9 465 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 CCNL1Q9UK58 526 aaPredicted RBP19.44■□□□□ 0.7
RXRB-201ENST00000374680 THRAP3Q9Y2W1 955 aaKnown RBP19.44■□□□□ 0.7
RXRB-201ENST00000374680 FAM237AA0A1B0GTK4 181 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 CCT6AP40227 531 aaKnown RBP19.44■□□□□ 0.7
RXRB-201ENST00000374680 MAPKAPK5Q8IW41 473 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 RASSF8Q8NHQ8 419 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 TGFBRAP1Q8WUH2 860 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 PAGE5Q96GU1 130 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 VAT1LQ9HCJ6 419 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 BRMS1Q9HCU9 246 aa19.44■□□□□ 0.7
RXRB-201ENST00000374680 MORC3Q14149 939 aa19.43■□□□□ 0.7
RXRB-201ENST00000374680 SH3RF3Q8TEJ3 882 aaPredicted RBP19.43■□□□□ 0.7
RXRB-201ENST00000374680 BRIP1Q9BX63 1249 aa19.43■□□□□ 0.7
RXRB-201ENST00000374680 IRX2Q9BZI1 471 aaPredicted RBP19.43■□□□□ 0.7
RXRB-201ENST00000374680 ANAPC4Q9UJX5 808 aa19.43■□□□□ 0.7
RXRB-201ENST00000374680 ANKRD36CQ5JPF3 1778 aa19.43■□□□□ 0.7
RXRB-201ENST00000374680 TOGARAM2Q6ZUX3 1019 aa19.43■□□□□ 0.7
RXRB-201ENST00000374680 PP2D1A8MPX8 630 aa19.42■□□□□ 0.7
RXRB-201ENST00000374680 SLU7O95391 586 aaKnown RBP19.42■□□□□ 0.7
RXRB-201ENST00000374680 NHSL1Q5SYE7 1610 aa19.42■□□□□ 0.7
RXRB-201ENST00000374680 A0A0U1RQJ8 604 aa19.42■□□□□ 0.7
RXRB-201ENST00000374680 NPY5RQ15761 445 aa19.42■□□□□ 0.7
RXRB-201ENST00000374680 KMT5BQ4FZB7 885 aa19.42■□□□□ 0.7
RXRB-201ENST00000374680 ATRIPQ8WXE1 791 aa19.42■□□□□ 0.7
RXRB-201ENST00000374680 PES1O00541 588 aaKnown RBP19.41■□□□□ 0.7
RXRB-201ENST00000374680 MLKLQ8NB16 471 aa19.41■□□□□ 0.7
RXRB-201ENST00000374680 BAG1Q99933 345 aaPredicted RBP19.41■□□□□ 0.7
RXRB-201ENST00000374680 KAT14Q9H8E8 782 aa19.41■□□□□ 0.7
RXRB-201ENST00000374680 ZHX1Q9UKY1 873 aaPredicted RBP19.41■□□□□ 0.7
RXRB-201ENST00000374680 RTCBQ9Y3I0 505 aaKnown RBP19.41■□□□□ 0.7
RXRB-201ENST00000374680 FANCGO15287 622 aa19.41■□□□□ 0.7
RXRB-201ENST00000374680 ZSWIM4Q9H7M6 989 aa19.41■□□□□ 0.7
RXRB-201ENST00000374680 ROBO1Q9Y6N7 1651 aa19.41■□□□□ 0.7
RXRB-201ENST00000374680 SCG2P13521 617 aa19.41■□□□□ 0.7
RXRB-201ENST00000374680 SARSP49591 514 aaKnown RBP19.41■□□□□ 0.7
RXRB-201ENST00000374680 FBXO38Q6PIJ6 1188 aa19.41■□□□□ 0.7
RXRB-201ENST00000374680 CTNND2Q9UQB3 1225 aa19.41■□□□□ 0.7
RXRB-201ENST00000374680 CNTNAP5Q8WYK1 1306 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 COL14A1Q05707 1796 aaKnown RBP19.4■□□□□ 0.7
RXRB-201ENST00000374680 PLCD1P51178 756 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 GNG11P61952 73 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 DPYDQ12882 1025 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 IL17AQ16552 155 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 NARFQ9UHQ1 456 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms