RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 SH2D4AQ9H788 454 aa18.01■□□□□ 0.47
PFDN6-203ENST00000374610 ORC4O43929 436 aa18■□□□□ 0.47
PFDN6-203ENST00000374610 MCCP23508 829 aa18■□□□□ 0.47
PFDN6-203ENST00000374610 MTMR2Q13614 643 aa18■□□□□ 0.47
PFDN6-203ENST00000374610 ZYXQ15942 572 aaKnown RBP18■□□□□ 0.47
PFDN6-203ENST00000374610 TBC1D10CQ8IV04 446 aa18■□□□□ 0.47
PFDN6-203ENST00000374610 ZIC5Q96T25 663 aa18■□□□□ 0.47
PFDN6-203ENST00000374610 WDR18Q9BV38 432 aa18■□□□□ 0.47
PFDN6-203ENST00000374610 C19orf81C9J6K1 198 aa17.99■□□□□ 0.47
PFDN6-203ENST00000374610 CYP21A2P08686 494 aa17.99■□□□□ 0.47
PFDN6-203ENST00000374610 ZKSCAN1P17029 563 aaPredicted RBP17.99■□□□□ 0.47
PFDN6-203ENST00000374610 USP14P54578 494 aa17.99■□□□□ 0.47
PFDN6-203ENST00000374610 KCNH4Q9UQ05 1017 aa17.99■□□□□ 0.47
PFDN6-203ENST00000374610 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.99■□□□□ 0.47
PFDN6-203ENST00000374610 NT5C2P49902 561 aa17.98■□□□□ 0.47
PFDN6-203ENST00000374610 HMGCS2P54868 508 aa17.98■□□□□ 0.47
PFDN6-203ENST00000374610 BACE1P56817 501 aa17.98■□□□□ 0.47
PFDN6-203ENST00000374610 CREB3L3Q68CJ9 461 aa17.98■□□□□ 0.47
PFDN6-203ENST00000374610 USP17L2Q6R6M4 530 aa17.98■□□□□ 0.47
PFDN6-203ENST00000374610 IQCA1Q86XH1 822 aa17.98■□□□□ 0.47
PFDN6-203ENST00000374610 NEDD1Q8NHV4 660 aa17.98■□□□□ 0.47
PFDN6-203ENST00000374610 STX8Q9UNK0 236 aa17.98■□□□□ 0.47
PFDN6-203ENST00000374610 NEDD4P46934 1319 aa17.98■□□□□ 0.47
PFDN6-203ENST00000374610 A0A0G2JLL6 359 aaPredicted RBP17.97■□□□□ 0.47
PFDN6-203ENST00000374610 B4E1Z4 1266 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 SLC27A2O14975 620 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 KDM4AO75164 1064 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 ALDH1A1P00352 501 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 FGRP09769 529 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 EEF2P13639 858 aaKnown RBP17.97■□□□□ 0.47
PFDN6-203ENST00000374610 GUCY1A2P33402 732 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 TM4SF4P48230 202 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 PABPC4Q13310 644 aaKnown RBP eCLIP17.97■□□□□ 0.474e-9■■■□□ 17.3
PFDN6-203ENST00000374610 PRRT2Q7Z6L0 340 aaPredicted RBP17.97■□□□□ 0.47
PFDN6-203ENST00000374610 IFNL1Q8IU54 200 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 NCOA7Q8NI08 942 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 MS4A4AQ96JQ5 239 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 NBPF3Q9H094 633 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 GOPCQ9HD26 462 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 CLIP2Q9UDT6 1046 aa17.97■□□□□ 0.47
PFDN6-203ENST00000374610 LAMA4Q16363 1823 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 E7EWF7 191 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 TTLL1O95922 423 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 NECTIN1Q15223 517 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 CLEC10AQ8IUN9 316 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 ACER1Q8TDN7 264 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 BRI3BPQ8WY22 251 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 CEP95Q96GE4 821 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 UBAC1Q9BSL1 405 aa17.96■□□□□ 0.47
PFDN6-203ENST00000374610 ISY1Q9ULR0 285 aaKnown RBP17.96■□□□□ 0.47
PFDN6-203ENST00000374610 ERICH2A1L162 156 aa17.95■□□□□ 0.46
PFDN6-203ENST00000374610 KRT32Q14532 448 aa17.95■□□□□ 0.46
PFDN6-203ENST00000374610 PROCA1Q8NCQ7 364 aaPredicted RBP17.95■□□□□ 0.46
PFDN6-203ENST00000374610 KIAA1683Q9H0B3 1180 aa17.95■□□□□ 0.46
PFDN6-203ENST00000374610 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
PFDN6-203ENST00000374610 NYAP2Q9P242 653 aa17.95■□□□□ 0.46
PFDN6-203ENST00000374610 TACC3Q9Y6A5 838 aa17.95■□□□□ 0.46
PFDN6-203ENST00000374610 TESPA1A2RU30 521 aaPredicted RBP17.94■□□□□ 0.46
PFDN6-203ENST00000374610 BTBD19C9JJ37 291 aa17.94■□□□□ 0.46
PFDN6-203ENST00000374610 PDHXO00330 501 aa17.94■□□□□ 0.46
PFDN6-203ENST00000374610 TRPA1O75762 1119 aa17.94■□□□□ 0.46
PFDN6-203ENST00000374610 OSBPP22059 807 aa17.94■□□□□ 0.46
PFDN6-203ENST00000374610 SART3Q15020 963 aaKnown RBP17.94■□□□□ 0.46
PFDN6-203ENST00000374610 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
PFDN6-203ENST00000374610 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
PFDN6-203ENST00000374610 PNMA3Q9UL41 463 aa17.94■□□□□ 0.46
PFDN6-203ENST00000374610 PLIN4Q96Q06 1357 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
PFDN6-203ENST00000374610 CA12O43570 354 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 NMT2O60551 498 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
PFDN6-203ENST00000374610 SH3D19Q5HYK7 790 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 JMYQ8N9B5 988 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.93■□□□□ 0.46
PFDN6-203ENST00000374610 ZFYVE28Q9HCC9 887 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 AGTPBP1Q9UPW5 1226 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 MTMR7Q9Y216 660 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 PHIPQ8WWQ0 1821 aa17.93■□□□□ 0.46
PFDN6-203ENST00000374610 IGKV6D-41A0A0C4DH26 115 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 A0A1W2PRG0 241 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 IGF2BP3O00425 579 aaKnown RBP eCLIP17.92■□□□□ 0.46
PFDN6-203ENST00000374610 IRX3P78415 501 aaPredicted RBP17.92■□□□□ 0.46
PFDN6-203ENST00000374610 DGKZQ13574 1117 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
PFDN6-203ENST00000374610 FAM43AQ8N2R8 423 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 LPAR1Q92633 364 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 ZSCAN10Q96SZ4 725 aaPredicted RBP17.92■□□□□ 0.46
PFDN6-203ENST00000374610 PTPN18Q99952 460 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 USP26Q9BXU7 913 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 VCPKMTQ9H867 229 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 EMILIN3Q9NT22 766 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 TCP11L1Q9NUJ3 509 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 RNF186Q9NXI6 227 aa17.92■□□□□ 0.46
PFDN6-203ENST00000374610 THSD7BQ9C0I4 1608 aa17.91■□□□□ 0.46
PFDN6-203ENST00000374610 IFIT3O14879 490 aaKnown RBP17.91■□□□□ 0.46
PFDN6-203ENST00000374610 HSPA4P34932 840 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms