RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SARNPP82979 210 aaKnown RBP14.56□□□□□ -0.08
PRPF4-201ENST00000374198 ELOA2Q8IYF1 753 aaPredicted RBP14.56□□□□□ -0.08
PRPF4-201ENST00000374198 GLI3P10071 1580 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 RFX7Q2KHR2 1363 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 OVOS2A0A0J9YW53 1432 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 OVOS2Q6IE36 1432 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 OPA1O60313 960 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 ATP5JP18859 108 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 PTPAQ15257 358 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 FAM98CQ17RN3 349 aaKnown RBP14.55□□□□□ -0.08
PRPF4-201ENST00000374198 AENQ8WTP8 325 aaKnown RBP14.55□□□□□ -0.08
PRPF4-201ENST00000374198 EYA1Q99502 592 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 FAM184BQ9ULE4 1060 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 LAMA4Q16363 1823 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 A0A1B0GUA9 196 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 NAP1L1P55209 391 aaKnown RBP14.55□□□□□ -0.08
PRPF4-201ENST00000374198 PDCLQ13371 301 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 SLC9C2Q5TAH2 1124 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 CENPHQ9H3R5 247 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 HDAC6Q9UBN7 1215 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 DDX20Q9UHI6 824 aaKnown RBP14.55□□□□□ -0.08
PRPF4-201ENST00000374198 CAMTA1Q9Y6Y1 1673 aa14.55□□□□□ -0.08
PRPF4-201ENST00000374198 PSMD14O00487 310 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 EPB41P11171 864 aaKnown RBP14.54□□□□□ -0.08
PRPF4-201ENST00000374198 FXR1P51114 621 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRPF4-201ENST00000374198 ERVK-24P63145 666 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 MORC3Q14149 939 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 SEPT12Q8IYM1 358 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 SAR1BQ9Y6B6 198 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 SPATA31A5Q5VU36 1347 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 SPATA31A7Q8IWB4 1347 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 KLHL33A6NCF5 533 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 ZEB2O60315 1214 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 GYPCP04921 128 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 IBSPP21815 317 aaPredicted RBP14.54□□□□□ -0.08
PRPF4-201ENST00000374198 CDR1P51861 262 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 CLNS1AP54105 237 aaKnown RBP14.54□□□□□ -0.08
PRPF4-201ENST00000374198 INHBEP58166 350 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 ZNF827Q17R98 1081 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 NT5DC1Q5TFE4 455 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 SLC40A1Q9NP59 571 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 NDUFB9Q9Y6M9 179 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 IGSF1Q8N6C5 1336 aa14.54□□□□□ -0.08
PRPF4-201ENST00000374198 ENC1O14682 589 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 ANXA1P04083 346 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 SARSP49591 514 aaKnown RBP14.53□□□□□ -0.08
PRPF4-201ENST00000374198 CKAP4Q07065 602 aaKnown RBP14.53□□□□□ -0.08
PRPF4-201ENST00000374198 TBC1D8BQ0IIM8 1120 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 POSTNQ15063 836 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 RNF187Q5TA31 235 aaPredicted RBP14.53□□□□□ -0.08
PRPF4-201ENST00000374198 CEP57Q86XR8 500 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 ADD3Q9UEY8 706 aaKnown RBP14.53□□□□□ -0.08
PRPF4-201ENST00000374198 IRF6O14896 467 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 SNCBQ16143 134 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 NAA35Q5VZE5 725 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 SND1Q7KZF4 910 aaKnown RBP eCLIP14.53□□□□□ -0.08
PRPF4-201ENST00000374198 FBXL16Q8N461 479 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 KAZALD1Q96I82 304 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 SUCLG2Q96I99 432 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 GUCA1BQ9UMX6 200 aa14.53□□□□□ -0.08
PRPF4-201ENST00000374198 ZMYM6O95789 1325 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 A0A0G2JLW4 131 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 SRGAP2O75044 1071 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 PLCD1P51178 756 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 GRIK3Q13003 919 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 ZKSCAN8Q15776 578 aaPredicted RBP14.52□□□□□ -0.08
PRPF4-201ENST00000374198 CYP26C1Q6V0L0 522 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 MAGEC3Q8TD91 643 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 MAP3K14Q99558 947 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 SLF1Q9BQI6 1058 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 DSCC1Q9BVC3 393 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 NFAT5O94916 1531 aa14.52□□□□□ -0.08
PRPF4-201ENST00000374198 SPATA31A1Q5TZJ5 1347 aa14.52□□□□□ -0.09
PRPF4-201ENST00000374198 ATP1A1P05023 1023 aaKnown RBP14.52□□□□□ -0.09
PRPF4-201ENST00000374198 ERCC5P28715 1186 aaPredicted RBP14.52□□□□□ -0.09
PRPF4-201ENST00000374198 TTMPQ5BVD1 217 aa14.52□□□□□ -0.09
PRPF4-201ENST00000374198 PAPD7Q5XG87 772 aaKnown RBP14.52□□□□□ -0.09
PRPF4-201ENST00000374198 UBE3BQ7Z3V4 1068 aa14.52□□□□□ -0.09
PRPF4-201ENST00000374198 TRIML1Q8N9V2 468 aa14.52□□□□□ -0.09
PRPF4-201ENST00000374198 ARL8AQ96BM9 186 aa14.52□□□□□ -0.09
PRPF4-201ENST00000374198 CAPZA3Q96KX2 299 aa14.52□□□□□ -0.09
PRPF4-201ENST00000374198 EPN3Q9H201 632 aa14.52□□□□□ -0.09
PRPF4-201ENST00000374198 GPHNQ9NQX3 736 aaPredicted RBP14.52□□□□□ -0.09
PRPF4-201ENST00000374198 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.52□□□□□ -0.09
PRPF4-201ENST00000374198 AXIN2Q9Y2T1 843 aa14.52□□□□□ -0.09
PRPF4-201ENST00000374198 MAP3K2Q9Y2U5 619 aa14.52□□□□□ -0.09
PRPF4-201ENST00000374198 EZRP15311 586 aaKnown RBP14.51□□□□□ -0.09
PRPF4-201ENST00000374198 CCNHP51946 323 aaPredicted RBP14.51□□□□□ -0.09
PRPF4-201ENST00000374198 CWF19L2Q2TBE0 894 aaKnown RBP14.51□□□□□ -0.09
PRPF4-201ENST00000374198 TLDC1Q6P9B6 456 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 CCDC50Q8IVM0 306 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 PARP9Q8IXQ6 854 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 TRIM10Q9UDY6 481 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 LMO7Q8WWI1 1683 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 SH3TC1Q8TE82 1336 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 HOXB7P09629 217 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 TOM1L2Q6ZVM7 507 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 RRP36Q96EU6 259 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms