RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ZNF772Q68DY9 489 aaPredicted RBP15.94■□□□□ 0.14
TRAF1-201ENST00000373887 FRMD4BQ9Y2L6 1034 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 DAPK3O43293 454 aa15.93■□□□□ 0.14
TRAF1-201ENST00000373887 ATP5DP30049 168 aa15.93■□□□□ 0.14
TRAF1-201ENST00000373887 RASSF4Q9H2L5 321 aa15.93■□□□□ 0.14
TRAF1-201ENST00000373887 CLNS1AP54105 237 aaKnown RBP15.93■□□□□ 0.14
TRAF1-201ENST00000373887 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
TRAF1-201ENST00000373887 METP08581 1390 aa15.93■□□□□ 0.14
TRAF1-201ENST00000373887 LMNTD2Q8IXW0 634 aa15.93■□□□□ 0.14
TRAF1-201ENST00000373887 IFT74Q96LB3 600 aa15.93■□□□□ 0.14
TRAF1-201ENST00000373887 BAG1Q99933 345 aaPredicted RBP15.93■□□□□ 0.14
TRAF1-201ENST00000373887 LONRF3Q496Y0 759 aa15.93■□□□□ 0.14
TRAF1-201ENST00000373887 GTPBP4Q9BZE4 634 aaKnown RBP15.93■□□□□ 0.14
TRAF1-201ENST00000373887 AFG3L2Q9Y4W6 797 aa15.93■□□□□ 0.14
TRAF1-201ENST00000373887 CLCN1P35523 988 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 WDR44Q5JSH3 913 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 NOC4LQ9BVI4 516 aaKnown RBP15.92■□□□□ 0.14
TRAF1-201ENST00000373887 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 AKR1B15C9JRZ8 316 aaPredicted RBP15.92■□□□□ 0.14
TRAF1-201ENST00000373887 KCNJ14Q9UNX9 436 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 EPB41P11171 864 aaKnown RBP15.92■□□□□ 0.14
TRAF1-201ENST00000373887 TNFAIP3P21580 790 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 CUL4BQ13620 913 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 LRRC24Q50LG9 513 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 TBC1D31Q96DN5 1066 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 AZI2Q9H6S1 392 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 ADCY7P51828 1080 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 LRRC47Q8N1G4 583 aaKnown RBP15.92■□□□□ 0.14
TRAF1-201ENST00000373887 MCUR1Q96AQ8 359 aa15.92■□□□□ 0.14
TRAF1-201ENST00000373887 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRAF1-201ENST00000373887 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRAF1-201ENST00000373887 TRAF5O00463 557 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 CSPG5O95196 566 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 VPS16Q9H269 839 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 UTP11Q9Y3A2 253 aaKnown RBP15.91■□□□□ 0.14
TRAF1-201ENST00000373887 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
TRAF1-201ENST00000373887 ERCC6LQ2NKX8 1250 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 STX10O60499 249 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 GIGYF1O75420 1035 aaPredicted RBP15.91■□□□□ 0.14
TRAF1-201ENST00000373887 SEC24BO95487 1268 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 CHRNDQ07001 517 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 HOOK2Q96ED9 719 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 DBNDD1Q9H9R9 158 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 PRAMEF22A3QJZ6 481 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 DEXIO95424 95 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 STRN3Q13033 797 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 RNF169Q8NCN4 708 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 USP26Q9BXU7 913 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 C8orf74Q6P047 294 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 DYMQ7RTS9 669 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 SULF1Q8IWU6 871 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 DDX27Q96GQ7 796 aaKnown RBP15.91■□□□□ 0.14
TRAF1-201ENST00000373887 USTQ9Y2C2 406 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 RAD50Q92878 1312 aa15.91■□□□□ 0.14
TRAF1-201ENST00000373887 ARHGEF35A5YM69 484 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 KIFAP3Q92845 792 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 TESPA1A2RU30 521 aaPredicted RBP15.9■□□□□ 0.14
TRAF1-201ENST00000373887 PDE4DQ08499 809 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 PLEKHG3A1L390 1219 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 PER1O15534 1290 aaPredicted RBP15.9■□□□□ 0.14
TRAF1-201ENST00000373887 LRRC43Q8N309 656 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 NDUFAB1O14561 156 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 ALAS1P13196 640 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 NCAPG2Q86XI2 1143 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 GREM2Q9H772 168 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 OGFRQ9NZT2 677 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 ANGEL1Q9UNK9 670 aaKnown RBP15.9■□□□□ 0.14
TRAF1-201ENST00000373887 GOLGA8HP0CJ92 632 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 SMTNP53814 917 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 METTL13Q8N6R0 699 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 FLAD1Q8NFF5 587 aa15.9■□□□□ 0.14
TRAF1-201ENST00000373887 BTDP43251 543 aa15.89■□□□□ 0.14
TRAF1-201ENST00000373887 C8orf34Q49A92 452 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 TMEM87BQ96K49 555 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 PLEKHA4Q9H4M7 779 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 USP17L12C9JPN9 530 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 USP17L21D6R901 530 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 PPARAQ07869 468 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 CNGA4Q8IV77 575 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 IQUBQ8NA54 791 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 SNX14Q9Y5W7 946 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 KRT19P08727 400 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 ASIC2Q16515 512 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 CCDC62Q6P9F0 684 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 CSRNP2Q9H175 543 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 GIPC1O14908 333 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 HOXB7P09629 217 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 MAN1A1P33908 653 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 ZNF365Q70YC5 407 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 KBTBD3Q8NAB2 608 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 TBC1D22AQ8WUA7 517 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 DACT3Q96B18 629 aaPredicted RBP15.89■□□□□ 0.13
TRAF1-201ENST00000373887 SWAP70Q9UH65 585 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 TTLL3Q9Y4R7 772 aa15.89■□□□□ 0.13
TRAF1-201ENST00000373887 FAM173BQ6P4H8 233 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 UBE2Q2Q8WVN8 375 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 ZBTB1Q9Y2K1 713 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 TUBB4AP04350 444 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 ZNF853P0CG23 659 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms