RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.46■□□□□ 0.71
PTPRU-202ENST00000373779 CRB1P82279 1406 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 ARHGEF40Q8TER5 1519 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 F8W031 263 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-202ENST00000373779 CABP7Q86V35 215 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 STMN4Q9H169 189 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-202ENST00000373779 FMNL1O95466 1100 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-202ENST00000373779 MAGEA1P43355 309 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 FOXP1Q9H334 677 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-202ENST00000373779 KAT6BQ8WYB5 2073 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 PTPRMP28827 1452 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 ERCC5P28715 1186 aaPredicted RBP19.46■□□□□ 0.71
PTPRU-202ENST00000373779 VWA3BQ502W6 1294 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 SYMPKQ92797 1274 aaKnown RBP19.46■□□□□ 0.71
PTPRU-202ENST00000373779 SEC31AO94979 1220 aaKnown RBP19.46■□□□□ 0.71
PTPRU-202ENST00000373779 B4GALNT4Q76KP1 1039 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 VSTM4Q8IW00 320 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 ANKS4BQ8N8V4 417 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 SAMM50Q9Y512 469 aa19.46■□□□□ 0.71
PTPRU-202ENST00000373779 SMARCC2Q8TAQ2 1214 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 NAP1L4Q99733 375 aaKnown RBP19.45■□□□□ 0.7
PTPRU-202ENST00000373779 CSRNP2Q9H175 543 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 BTG4Q9NY30 223 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 NDUFAB1O14561 156 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 SELENOSQ9BQE4 189 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 DESP17661 470 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 PTPN21Q16825 1174 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 SRGAP1Q7Z6B7 1085 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 A6NNZ2 444 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 GTPBP6O43824 516 aaPredicted RBP19.45■□□□□ 0.7
PTPRU-202ENST00000373779 TUBB8Q3ZCM7 444 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 SLC9C1Q4G0N8 1177 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 DCAF17Q5H9S7 520 aaPredicted RBP19.45■□□□□ 0.7
PTPRU-202ENST00000373779 SND1Q7KZF4 910 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTPRU-202ENST00000373779 TRMT1LQ7Z2T5 733 aaKnown RBP19.45■□□□□ 0.7
PTPRU-202ENST00000373779 MYO3AQ8NEV4 1616 aa19.45■□□□□ 0.7
PTPRU-202ENST00000373779 EZRP15311 586 aaKnown RBP19.44■□□□□ 0.7
PTPRU-202ENST00000373779 HMGB2P26583 209 aaKnown RBP19.44■□□□□ 0.7
PTPRU-202ENST00000373779 ARID4AP29374 1257 aaPredicted RBP19.44■□□□□ 0.7
PTPRU-202ENST00000373779 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 CPLX4Q7Z7G2 160 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 UBLCP1Q8WVY7 318 aaPredicted RBP19.44■□□□□ 0.7
PTPRU-202ENST00000373779 CDC23Q9UJX2 597 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 ZC3H13Q5T200 1668 aaKnown RBP19.44■□□□□ 0.7
PTPRU-202ENST00000373779 CAMSAP1Q5T5Y3 1602 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 SPDYE3A6NKU9 549 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 FAM13AO94988 1023 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 PHKA1P46020 1223 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 FAM47AQ5JRC9 791 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 FBXO38Q6PIJ6 1188 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 IQCDQ96DY2 449 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 GOLPH3LQ9H4A5 285 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 MAN1B1Q9UKM7 699 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 NCAPD2Q15021 1401 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 IFIH1Q9BYX4 1025 aaKnown RBP19.44■□□□□ 0.7
PTPRU-202ENST00000373779 GREM2Q9H772 168 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 LRWD1Q9UFC0 647 aa19.44■□□□□ 0.7
PTPRU-202ENST00000373779 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
PTPRU-202ENST00000373779 PUS7LQ9H0K6 701 aaKnown RBP19.44■□□□□ 0.7
PTPRU-202ENST00000373779 ALDH8A1Q9H2A2 487 aaPredicted RBP19.44■□□□□ 0.7
PTPRU-202ENST00000373779 SH2B2O14492 632 aaPredicted RBP19.43■□□□□ 0.7
PTPRU-202ENST00000373779 KIF4AO95239 1232 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 RPL13P26373 211 aaKnown RBP19.43■□□□□ 0.7
PTPRU-202ENST00000373779 NF2P35240 595 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 UBE4AQ14139 1066 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 TICAM2Q86XR7 235 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 PSMB7Q99436 277 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 NRKQ7Z2Y5 1582 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 ABCA9Q8IUA7 1624 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 IGKV5-2P06315 115 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 CASP14P31944 242 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 ADD2P35612 726 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 TRAF1Q13077 416 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 CCDC174Q6PII3 467 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 CCDC84Q86UT8 332 aaPredicted RBP19.43■□□□□ 0.7
PTPRU-202ENST00000373779 HAUS4Q9H6D7 363 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 H7C1D1 291 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 PDE8BO95263 885 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 ASIC2Q16515 512 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 TEX11Q8IYF3 940 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 SDR42E1Q8WUS8 393 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 CDC42BPGQ6DT37 1551 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 CLCN6P51797 869 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 PPFIA1Q13136 1202 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 HS2ST1Q7LGA3 356 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 HOOK3Q86VS8 718 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 CCDC26Q8TAB7 109 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 CCDC114Q96M63 670 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 GSDMAQ96QA5 445 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 CCDC87Q9NVE4 849 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 CCDC144BQ3MJ40 725 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 EPHA10Q5JZY3 1008 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 TYW1BQ6NUM6 668 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 PPM1EQ8WY54 764 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 NGLY1Q96IV0 654 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 GDAP1L1Q96MZ0 367 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 TSKSQ9UJT2 592 aa19.43■□□□□ 0.7
PTPRU-202ENST00000373779 LZTS2Q9BRK4 669 aa19.42■□□□□ 0.7
PTPRU-202ENST00000373779 TMEM110-MUSTN1A8MSY1 372 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms