RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 SOGA3Q5TF21 947 aa18.19■□□□□ 0.5
HDAC8-209ENST00000373589 SRBD1Q8N5C6 995 aaKnown RBP18.19■□□□□ 0.5
HDAC8-209ENST00000373589 PNMA1Q8ND90 353 aa18.19■□□□□ 0.5
HDAC8-209ENST00000373589 POLR3EQ9NVU0 708 aa18.19■□□□□ 0.5
HDAC8-209ENST00000373589 PCDHAC2Q9Y5I4 1007 aa18.19■□□□□ 0.5
HDAC8-209ENST00000373589 PLIN4Q96Q06 1357 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 GOLGA6L4A6NEF3 574 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 NASPP49321 788 aaPredicted RBP18.18■□□□□ 0.5
HDAC8-209ENST00000373589 KLHL34Q8N239 644 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.18■□□□□ 0.5
HDAC8-209ENST00000373589 IDI2Q9BXS1 227 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 PIM2Q9P1W9 311 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 CNTNAP5Q8WYK1 1306 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
HDAC8-209ENST00000373589 LIG1P18858 919 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 KIF5BP33176 963 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 AKAP17AQ02040 695 aaKnown RBP18.18■□□□□ 0.5
HDAC8-209ENST00000373589 LINC00301Q8NCQ3 95 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 TMEM47Q9BQJ4 181 aa18.18■□□□□ 0.5
HDAC8-209ENST00000373589 ZNF277Q9NRM2 450 aaPredicted RBP18.18■□□□□ 0.5
HDAC8-209ENST00000373589 V9GY48 417 aaPredicted RBP18.18■□□□□ 0.5
HDAC8-209ENST00000373589 COL4A5P29400 1685 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 MYO3BQ8WXR4 1341 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 PSME4Q14997 1843 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 LETM1O95202 739 aaPredicted RBP18.17■□□□□ 0.5
HDAC8-209ENST00000373589 YEATS4O95619 227 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 GRM4Q14833 912 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 LARGE2Q8N3Y3 721 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 SHISA4Q96DD7 197 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 SWAP70Q9UH65 585 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 SERPINB13Q9UIV8 391 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 CLIC4Q9Y696 253 aa18.17■□□□□ 0.5
HDAC8-209ENST00000373589 VIL1P09327 827 aaKnown RBP18.16■□□□□ 0.5
HDAC8-209ENST00000373589 EHD4Q9H223 541 aa18.16■□□□□ 0.5
HDAC8-209ENST00000373589 FOXP1Q9H334 677 aaPredicted RBP18.16■□□□□ 0.5
HDAC8-209ENST00000373589 STX8Q9UNK0 236 aa18.16■□□□□ 0.5
HDAC8-209ENST00000373589 KCNJ14Q9UNX9 436 aa18.16■□□□□ 0.5
HDAC8-209ENST00000373589 RBM5P52756 815 aaKnown RBP eCLIP18.15■□□□□ 0.5
HDAC8-209ENST00000373589 SAFBQ15424 915 aaKnown RBP eCLIP18.15■□□□□ 0.5
HDAC8-209ENST00000373589 RSBN1LQ6PCB5 846 aaPredicted RBP18.15■□□□□ 0.5
HDAC8-209ENST00000373589 NOSTRINQ8IVI9 506 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 ZFPM1Q8IX07 1006 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 DIS3L2Q8IYB7 885 aaKnown RBP18.15■□□□□ 0.5
HDAC8-209ENST00000373589 CEP95Q96GE4 821 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 GMLQ99445 158 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 SGIP1Q9BQI5 828 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 FAM198AQ9UFP1 575 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 MAD2L2Q9UI95 211 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 IGKV6D-41A0A0C4DH26 115 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 BTBD18B2RXH4 712 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 HLA-DOAP06340 250 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 SHMT1P34896 483 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 GNL2Q13823 731 aaKnown RBP18.15■□□□□ 0.5
HDAC8-209ENST00000373589 R3HDM1Q15032 1099 aaKnown RBP18.15■□□□□ 0.5
HDAC8-209ENST00000373589 ANO1Q5XXA6 986 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 KCNG4Q8TDN1 519 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 TAOK2Q9UL54 1235 aa18.15■□□□□ 0.5
HDAC8-209ENST00000373589 hCG_1642624A0A1W2PR95 340 aa18.14■□□□□ 0.49
HDAC8-209ENST00000373589 XBP1P17861 261 aa18.14■□□□□ 0.49
HDAC8-209ENST00000373589 GNAQP50148 359 aa18.14■□□□□ 0.49
HDAC8-209ENST00000373589 CACNB3P54284 484 aa18.14■□□□□ 0.49
HDAC8-209ENST00000373589 CFAP100Q494V2 611 aa18.14■□□□□ 0.49
HDAC8-209ENST00000373589 DALRD3Q5D0E6 543 aaKnown RBP18.14■□□□□ 0.49
HDAC8-209ENST00000373589 BICD2Q8TD16 824 aa18.14■□□□□ 0.49
HDAC8-209ENST00000373589 DHX36Q9H2U1 1008 aaKnown RBP18.14■□□□□ 0.49
HDAC8-209ENST00000373589 DACT1Q9NYF0 836 aa18.14■□□□□ 0.49
HDAC8-209ENST00000373589 MYH6P13533 1939 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 PALM3A6NDB9 673 aaPredicted RBP18.13■□□□□ 0.49
HDAC8-209ENST00000373589 PSMD14O00487 310 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 RAD17O75943 681 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 TOP1P11387 765 aaKnown RBP18.13■□□□□ 0.49
HDAC8-209ENST00000373589 AKR1B1P15121 316 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 ME1P48163 572 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 STK38Q15208 465 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 STAG2Q8N3U4 1231 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 RBSNQ9H1K0 784 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 DDX19AQ9NUU7 478 aaKnown RBP18.13■□□□□ 0.49
HDAC8-209ENST00000373589 MTMR4Q9NYA4 1195 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 VPS54Q9P1Q0 977 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 PCDHA7Q9UN72 937 aa18.13■□□□□ 0.49
HDAC8-209ENST00000373589 SPTLC2O15270 562 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 NR1I2O75469 434 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 SLC39A14Q15043 492 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 PFKFB3Q16875 520 aaPredicted RBP18.12■□□□□ 0.49
HDAC8-209ENST00000373589 ADALQ6DHV7 355 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 SH3BP5LQ7L8J4 393 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 PRMT6Q96LA8 375 aaPredicted RBP18.12■□□□□ 0.49
HDAC8-209ENST00000373589 ZNRF3Q9ULT6 936 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 BRCA1P38398 1863 aaKnown RBP18.12■□□□□ 0.49
HDAC8-209ENST00000373589 A0A1W2PQ27 194 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 A0A1W2PQ64 194 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 A0A1W2PQD8 194 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 DDTLA6NHG4 134 aaPredicted RBP18.12■□□□□ 0.49
HDAC8-209ENST00000373589 SCG2P13521 617 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 PTPAQ15257 358 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 SLC35G1Q2M3R5 365 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 CCAR1Q8IX12 1150 aaKnown RBP18.12■□□□□ 0.49
HDAC8-209ENST00000373589 OXER1Q8TDS5 423 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 PANK2Q9BZ23 570 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms