RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 SLC44A5Q8NCS7 719 aa21.8■■□□□ 1.08
PBX3-205ENST00000373492 ESYT1Q9BSJ8 1104 aa21.8■■□□□ 1.08
PBX3-205ENST00000373492 CTNNA3Q9UI47 895 aa21.8■■□□□ 1.08
PBX3-205ENST00000373492 SMIM22K7EJ46 135 aa21.79■■□□□ 1.08
PBX3-205ENST00000373492 GH2P01242 217 aa21.79■■□□□ 1.08
PBX3-205ENST00000373492 DGKZQ13574 1117 aa21.79■■□□□ 1.08
PBX3-205ENST00000373492 SH3D19Q5HYK7 790 aa21.79■■□□□ 1.08
PBX3-205ENST00000373492 GADL1Q6ZQY3 521 aa21.79■■□□□ 1.08
PBX3-205ENST00000373492 CCDC17Q96LX7 622 aa21.79■■□□□ 1.08
PBX3-205ENST00000373492 LOC285556D6RIA3 1793 aa21.79■■□□□ 1.08
PBX3-205ENST00000373492 C19orf81C9J6K1 198 aa21.78■■□□□ 1.08
PBX3-205ENST00000373492 MPHOSPH10O00566 681 aaKnown RBP21.78■■□□□ 1.08
PBX3-205ENST00000373492 BACE1P56817 501 aa21.78■■□□□ 1.08
PBX3-205ENST00000373492 SP3Q02447 781 aa21.78■■□□□ 1.08
PBX3-205ENST00000373492 IFFO2Q5TF58 517 aa21.78■■□□□ 1.08
PBX3-205ENST00000373492 ERO1AQ96HE7 468 aa21.78■■□□□ 1.08
PBX3-205ENST00000373492 PARK7Q99497 189 aaKnown RBP21.78■■□□□ 1.08
PBX3-205ENST00000373492 MCOLN1Q9GZU1 580 aa21.78■■□□□ 1.08
PBX3-205ENST00000373492 ANAPC4Q9UJX5 808 aa21.78■■□□□ 1.08
PBX3-205ENST00000373492 AGTPBP1Q9UPW5 1226 aa21.78■■□□□ 1.08
PBX3-205ENST00000373492 ZNF213O14771 459 aa21.77■■□□□ 1.08
PBX3-205ENST00000373492 CTDSPL2Q05D32 466 aa21.77■■□□□ 1.08
PBX3-205ENST00000373492 PKN2Q16513 984 aaKnown RBP21.77■■□□□ 1.08
PBX3-205ENST00000373492 SHROOM1Q2M3G4 852 aaPredicted RBP21.77■■□□□ 1.08
PBX3-205ENST00000373492 USP17L10C9JJH3 530 aa21.76■■□□□ 1.07
PBX3-205ENST00000373492 HMGCS2P54868 508 aa21.76■■□□□ 1.07
PBX3-205ENST00000373492 RAB3GAP1Q15042 981 aa21.76■■□□□ 1.07
PBX3-205ENST00000373492 IMMTQ16891 758 aaKnown RBP21.76■■□□□ 1.07
PBX3-205ENST00000373492 TMEM179Q6ZVK1 233 aa21.76■■□□□ 1.07
PBX3-205ENST00000373492 ZNF444Q8N0Y2 327 aaPredicted RBP21.76■■□□□ 1.07
PBX3-205ENST00000373492 HAND2P61296 217 aa21.75■■□□□ 1.07
PBX3-205ENST00000373492 PTH1RQ03431 593 aa21.75■■□□□ 1.07
PBX3-205ENST00000373492 PABPC4Q13310 644 aaKnown RBP eCLIP21.75■■□□□ 1.07
PBX3-205ENST00000373492 MTMR2Q13614 643 aa21.75■■□□□ 1.07
PBX3-205ENST00000373492 C17orf99Q6UX52 265 aa21.75■■□□□ 1.07
PBX3-205ENST00000373492 TMOD4Q9NZQ9 345 aa21.75■■□□□ 1.07
PBX3-205ENST00000373492 U3KPZ7 1027 aaPredicted RBP21.75■■□□□ 1.07
PBX3-205ENST00000373492 PRDM1O75626 825 aa21.74■■□□□ 1.07
PBX3-205ENST00000373492 AKR1B1P15121 316 aa21.74■■□□□ 1.07
PBX3-205ENST00000373492 RASA1P20936 1047 aa21.74■■□□□ 1.07
PBX3-205ENST00000373492 ARHGEF6Q15052 776 aa21.74■■□□□ 1.07
PBX3-205ENST00000373492 ABHD8Q96I13 439 aa21.74■■□□□ 1.07
PBX3-205ENST00000373492 RNF41Q9H4P4 317 aaPredicted RBP21.74■■□□□ 1.07
PBX3-205ENST00000373492 ANO2Q9NQ90 1003 aa21.74■■□□□ 1.07
PBX3-205ENST00000373492 PNMA3Q9UL41 463 aa21.74■■□□□ 1.07
PBX3-205ENST00000373492 ADGRA2Q96PE1 1338 aa21.74■■□□□ 1.07
PBX3-205ENST00000373492 CYP2C8P10632 490 aa21.73■■□□□ 1.07
PBX3-205ENST00000373492 PCP11498 1178 aaKnown RBP21.73■■□□□ 1.07
PBX3-205ENST00000373492 GUCY1A2P33402 732 aa21.73■■□□□ 1.07
PBX3-205ENST00000373492 TREML2Q5T2D2 321 aa21.73■■□□□ 1.07
PBX3-205ENST00000373492 MFSD6Q6ZSS7 791 aa21.73■■□□□ 1.07
PBX3-205ENST00000373492 MAP4K1Q92918 833 aa21.73■■□□□ 1.07
PBX3-205ENST00000373492 TOMM22Q9NS69 142 aa21.73■■□□□ 1.07
PBX3-205ENST00000373492 USP14P54578 494 aa21.72■■□□□ 1.07
PBX3-205ENST00000373492 SEPT2Q15019 361 aa21.72■■□□□ 1.07
PBX3-205ENST00000373492 AKNAD1Q5T1N1 836 aa21.72■■□□□ 1.07
PBX3-205ENST00000373492 USP17L2Q6R6M4 530 aa21.72■■□□□ 1.07
PBX3-205ENST00000373492 CD99L2Q8TCZ2 262 aa21.72■■□□□ 1.07
PBX3-205ENST00000373492 CPA4Q9UI42 421 aa21.72■■□□□ 1.07
PBX3-205ENST00000373492 ORC4O43929 436 aa21.71■■□□□ 1.07
PBX3-205ENST00000373492 TSPY3P0CV98 308 aa21.71■■□□□ 1.07
PBX3-205ENST00000373492 TSPY8P0CW00 308 aa21.71■■□□□ 1.07
PBX3-205ENST00000373492 OSBPP22059 807 aa21.71■■□□□ 1.07
PBX3-205ENST00000373492 HOXA7P31268 230 aaPredicted RBP21.71■■□□□ 1.07
PBX3-205ENST00000373492 LACTBP83111 547 aaPredicted RBP21.71■■□□□ 1.07
PBX3-205ENST00000373492 KIF22Q14807 665 aa21.71■■□□□ 1.07
PBX3-205ENST00000373492 STAG1Q8WVM7 1258 aa21.71■■□□□ 1.07
PBX3-205ENST00000373492 LSG1Q9H089 658 aaKnown RBP21.71■■□□□ 1.07
PBX3-205ENST00000373492 KIAA1683Q9H0B3 1180 aa21.71■■□□□ 1.07
PBX3-205ENST00000373492 EFCC1Q9HA90 598 aa21.71■■□□□ 1.07
PBX3-205ENST00000373492 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.71■■□□□ 1.07
PBX3-205ENST00000373492 TRIM17Q9Y577 477 aa21.71■■□□□ 1.07
PBX3-205ENST00000373492 TSPY2A6NKD2 308 aa21.7■■□□□ 1.06
PBX3-205ENST00000373492 BCRP11274 1271 aa21.7■■□□□ 1.06
PBX3-205ENST00000373492 RRP12Q5JTH9 1297 aaKnown RBP21.7■■□□□ 1.06
PBX3-205ENST00000373492 OTOP1Q7RTM1 612 aa21.7■■□□□ 1.06
PBX3-205ENST00000373492 SMCR8Q8TEV9 937 aaPredicted RBP21.7■■□□□ 1.06
PBX3-205ENST00000373492 C12orf42Q96LP6 360 aa21.7■■□□□ 1.06
PBX3-205ENST00000373492 FEZ1Q99689 392 aa21.7■■□□□ 1.06
PBX3-205ENST00000373492 KANSL2Q9H9L4 492 aa21.7■■□□□ 1.06
PBX3-205ENST00000373492 ARHGEF10LQ9HCE6 1279 aa21.7■■□□□ 1.06
PBX3-205ENST00000373492 EMILIN3Q9NT22 766 aa21.7■■□□□ 1.06
PBX3-205ENST00000373492 RBM8AQ9Y5S9 174 aaKnown RBP21.7■■□□□ 1.06
PBX3-205ENST00000373492 RANBP6O60518 1105 aaKnown RBP21.69■■□□□ 1.06
PBX3-205ENST00000373492 REC8O95072 547 aa21.69■■□□□ 1.06
PBX3-205ENST00000373492 FGRP09769 529 aa21.69■■□□□ 1.06
PBX3-205ENST00000373492 TFAP4Q01664 338 aa21.69■■□□□ 1.06
PBX3-205ENST00000373492 ICA1Q05084 483 aa21.69■■□□□ 1.06
PBX3-205ENST00000373492 FBXO46Q6PJ61 603 aaPredicted RBP21.69■■□□□ 1.06
PBX3-205ENST00000373492 TBC1D10CQ8IV04 446 aa21.69■■□□□ 1.06
PBX3-205ENST00000373492 PLIN4Q96Q06 1357 aa21.69■■□□□ 1.06
PBX3-205ENST00000373492 PARP14Q460N5 1801 aa21.69■■□□□ 1.06
PBX3-205ENST00000373492 GNRH1P01148 92 aa21.68■■□□□ 1.06
PBX3-205ENST00000373492 NT5C2P49902 561 aa21.68■■□□□ 1.06
PBX3-205ENST00000373492 FAM47AQ5JRC9 791 aa21.68■■□□□ 1.06
PBX3-205ENST00000373492 NEDD1Q8NHV4 660 aa21.68■■□□□ 1.06
PBX3-205ENST00000373492 ACER1Q8TDN7 264 aa21.68■■□□□ 1.06
PBX3-205ENST00000373492 NBPF3Q9H094 633 aa21.68■■□□□ 1.06
PBX3-205ENST00000373492 ASCC2Q9H1I8 757 aaPredicted RBP21.68■■□□□ 1.06
PBX3-205ENST00000373492 SH2D4AQ9H788 454 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms