RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 CDC23Q9UJX2 597 aa11.09□□□□□ -0.63
CSMD2-203ENST00000373377 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
CSMD2-203ENST00000373377 SMIM22K7EJ46 135 aa11.09□□□□□ -0.63
CSMD2-203ENST00000373377 EIF3JO75822 258 aaKnown RBP11.09□□□□□ -0.63
CSMD2-203ENST00000373377 PDE6AP16499 860 aa11.09□□□□□ -0.63
CSMD2-203ENST00000373377 RRAGBQ5VZM2 374 aa11.09□□□□□ -0.63
CSMD2-203ENST00000373377 MFSD6Q6ZSS7 791 aa11.09□□□□□ -0.63
CSMD2-203ENST00000373377 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
CSMD2-203ENST00000373377 ENOX1Q8TC92 643 aaKnown RBP11.09□□□□□ -0.63
CSMD2-203ENST00000373377 PLIN2Q99541 437 aa11.09□□□□□ -0.63
CSMD2-203ENST00000373377 FAM217BQ9NTX9 383 aaPredicted RBP11.09□□□□□ -0.63
CSMD2-203ENST00000373377 ACTN2P35609 894 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 ADD2P35612 726 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 WTAPQ15007 396 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.64
CSMD2-203ENST00000373377 IGDCC4Q8TDY8 1250 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 GPR108Q9NPR9 543 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 STRN4Q9NRL3 753 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 FBXO2Q9UK22 296 aaPredicted RBP11.08□□□□□ -0.64
CSMD2-203ENST00000373377 A0A087X0B3 334 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 MMP1P03956 469 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 PLCD1P51178 756 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 NR1I3Q14994 352 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 NTRK3Q16288 839 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 NOM1Q5C9Z4 860 aaKnown RBP11.08□□□□□ -0.64
CSMD2-203ENST00000373377 CEP112Q8N8E3 955 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 GOLGA5Q8TBA6 731 aa11.08□□□□□ -0.64
CSMD2-203ENST00000373377 ZNF18P17022 549 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 MDM2Q00987 491 aaPredicted RBP11.07□□□□□ -0.64
CSMD2-203ENST00000373377 MORC3Q14149 939 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 CASP8Q14790 479 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 DNAJC21Q5F1R6 531 aaKnown RBP11.07□□□□□ -0.64
CSMD2-203ENST00000373377 BEND6Q5SZJ8 279 aaPredicted RBP11.07□□□□□ -0.64
CSMD2-203ENST00000373377 CAGE1Q8TC20 777 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 SYMPKQ92797 1274 aaKnown RBP11.07□□□□□ -0.64
CSMD2-203ENST00000373377 DRC1Q96MC2 740 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 BRD3Q15059 726 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 PCMTD1Q96MG8 357 aaPredicted RBP11.07□□□□□ -0.64
CSMD2-203ENST00000373377 UBAC1Q9BSL1 405 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 FAM204AQ9H8W3 233 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 ABCF2Q9UG63 623 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 DOT1LQ8TEK3 1739 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 RNF225M0QZC1 329 aaPredicted RBP11.07□□□□□ -0.64
CSMD2-203ENST00000373377 ATP8B1O43520 1251 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 PTPREP23469 700 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 KRT9P35527 623 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 MATR3P43243 847 aaKnown RBP eCLIP11.07□□□□□ -0.64
CSMD2-203ENST00000373377 SART3Q15020 963 aaKnown RBP11.07□□□□□ -0.64
CSMD2-203ENST00000373377 IFNL3Q8IZI9 196 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 EXOC4Q96A65 974 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 NAPGQ99747 312 aaPredicted RBP11.07□□□□□ -0.64
CSMD2-203ENST00000373377 SLC4A4Q9Y6R1 1079 aa11.07□□□□□ -0.64
CSMD2-203ENST00000373377 ERCC3P19447 782 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 RILPL1Q5EBL4 403 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 EARS2Q5JPH6 523 aaKnown RBP11.06□□□□□ -0.64
CSMD2-203ENST00000373377 TTC19Q6DKK2 380 aaPredicted RBP11.06□□□□□ -0.64
CSMD2-203ENST00000373377 SRLQ86TD4 932 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 PSMB7Q99436 277 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 CHP1Q99653 195 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.06□□□□□ -0.64
CSMD2-203ENST00000373377 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 MYH15Q9Y2K3 1946 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 LRRIQ3A6PVS8 624 aaPredicted RBP11.06□□□□□ -0.64
CSMD2-203ENST00000373377 MFAP3LO75121 409 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 GYPCP04921 128 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 KIF6Q6ZMV9 814 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 SDR42E1Q8WUS8 393 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 TMEM87BQ96K49 555 aa11.06□□□□□ -0.64
CSMD2-203ENST00000373377 DDX60Q8IY21 1712 aaKnown RBP11.06□□□□□ -0.64
CSMD2-203ENST00000373377 A0A1B0GTH6 734 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 TRIM75PA6NK02 468 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 WNT7AO00755 349 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 ACTN4O43707 911 aaKnown RBP11.05□□□□□ -0.64
CSMD2-203ENST00000373377 CIAO1O76071 339 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 UBXN1Q04323 297 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 SPATA1Q5VX52 437 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 WASF1Q92558 559 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 EPB41L4AQ9HCS5 686 aaPredicted RBP11.05□□□□□ -0.64
CSMD2-203ENST00000373377 TRMT112Q9UI30 125 aaKnown RBP11.05□□□□□ -0.64
CSMD2-203ENST00000373377 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
CSMD2-203ENST00000373377 FMNL1O95466 1100 aaPredicted RBP11.05□□□□□ -0.64
CSMD2-203ENST00000373377 DNA2P51530 1060 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 ERVK-24P63145 666 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 PAGE5Q96GU1 130 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 POLD4Q9HCU8 107 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 TACC3Q9Y6A5 838 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 CASZ1Q86V15 1759 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 CYP2D7A0A087X1C5 515 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 MCM7P33993 719 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 DPYDQ12882 1025 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 HLFQ16534 295 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 DNAJC10Q8IXB1 793 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 STRBPQ96SI9 672 aaKnown RBP11.05□□□□□ -0.64
CSMD2-203ENST00000373377 TSPYL1Q9H0U9 437 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 SLAIN2Q9P270 581 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 LRP2BPQ9P2M1 347 aa11.05□□□□□ -0.64
CSMD2-203ENST00000373377 PCDH11XQ9BZA7 1347 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 PCDH11YQ9BZA8 1340 aa11.04□□□□□ -0.64
CSMD2-203ENST00000373377 MACROD2A1Z1Q3 448 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms