RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 MAP3K9P80192 1104 aa11.32□□□□□ -0.6
ITM2A-201ENST00000373298 DCAF15Q66K64 600 aa11.32□□□□□ -0.6
ITM2A-201ENST00000373298 CYP4F22Q6NT55 531 aa11.32□□□□□ -0.6
ITM2A-201ENST00000373298 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
ITM2A-201ENST00000373298 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.32□□□□□ -0.6
ITM2A-201ENST00000373298 HERC5Q9UII4 1024 aaKnown RBP11.32□□□□□ -0.6
ITM2A-201ENST00000373298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
ITM2A-201ENST00000373298 ZMYM6O95789 1325 aa11.32□□□□□ -0.6
ITM2A-201ENST00000373298 NEDD4P46934 1319 aa11.32□□□□□ -0.6
ITM2A-201ENST00000373298 GH2P01242 217 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 HSPA6P17066 643 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 CAP2P40123 477 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 GRM1Q13255 1194 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 DGKZQ13574 1117 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 NECTIN1Q15223 517 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 FAM47AQ5JRC9 791 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 ARMC9Q7Z3E5 817 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 ANAPC4Q9UJX5 808 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
ITM2A-201ENST00000373298 FAM155AB1AL88 458 aaPredicted RBP11.31□□□□□ -0.6
ITM2A-201ENST00000373298 NMT2O60551 498 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 IREB2P48200 963 aaKnown RBP11.31□□□□□ -0.6
ITM2A-201ENST00000373298 CERKLQ49MI3 558 aaPredicted RBP11.31□□□□□ -0.6
ITM2A-201ENST00000373298 CREB3L3Q68CJ9 461 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 CASC1Q6TDU7 716 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 ANKRD13AQ8IZ07 590 aa11.31□□□□□ -0.6
ITM2A-201ENST00000373298 PTPRFP10586 1907 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 ZNF213O14771 459 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 SLC27A2O14975 620 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 CTNND1O60716 968 aaKnown RBP11.3□□□□□ -0.6
ITM2A-201ENST00000373298 FGRP09769 529 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 PTPRAP18433 802 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 FKBP1BP68106 108 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 SEPT2Q15019 361 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 RGMBQ6NW40 437 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 RASAL3Q86YV0 1011 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 SIAH1Q8IUQ4 282 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 SCYL3Q8IZE3 742 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 USP26Q9BXU7 913 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
ITM2A-201ENST00000373298 CENPFP49454 3210 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 MPHOSPH10O00566 681 aaKnown RBP11.29□□□□□ -0.6
ITM2A-201ENST00000373298 AOC2O75106 756 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
ITM2A-201ENST00000373298 ADCK5Q3MIX3 580 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 RRP12Q5JTH9 1297 aaKnown RBP11.29□□□□□ -0.6
ITM2A-201ENST00000373298 NOL9Q5SY16 702 aaKnown RBP11.29□□□□□ -0.6
ITM2A-201ENST00000373298 AKNAD1Q5T1N1 836 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 STAG1Q8WVM7 1258 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 OPTNQ96CV9 577 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 HOOK2Q96ED9 719 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 ZBTB21Q9ULJ3 1066 aa11.29□□□□□ -0.6
ITM2A-201ENST00000373298 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 RASSF10A6NK89 507 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 B4E1Z4 1266 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 E7EWF7 191 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 IRF6O14896 467 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 CPA1P15085 419 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 ECE1P42892 770 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 VEGFBP49765 207 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 TFAP4Q01664 338 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 RAB3GAP1Q15042 981 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 IMMTQ16891 758 aaKnown RBP11.28□□□□□ -0.6
ITM2A-201ENST00000373298 ABCB5Q2M3G0 1257 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 DEFB115Q30KQ5 88 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
ITM2A-201ENST00000373298 SLC10A4Q96EP9 437 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 IL17RBQ9NRM6 502 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 SWAP70Q9UH65 585 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 CSADQ9Y600 493 aa11.28□□□□□ -0.6
ITM2A-201ENST00000373298 SPDYE5A6NIY4 337 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 ORC4O43929 436 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 RANBP6O60518 1105 aaKnown RBP11.27□□□□□ -0.6
ITM2A-201ENST00000373298 SLC10A3P09131 477 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 HSPA4P34932 840 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 KIAA1755Q5JYT7 1200 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 RASGRP2Q7LDG7 609 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 CHST3Q7LGC8 479 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 DNAJC5GQ8N7S2 189 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 CHMP4CQ96CF2 233 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 WNK4Q96J92 1243 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 CAPNS2Q96L46 248 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.6
ITM2A-201ENST00000373298 TOMM22Q9NS69 142 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 CTNNA3Q9UI47 895 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 ZHX2Q9Y6X8 837 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 MYH4Q9Y623 1939 aa11.27□□□□□ -0.6
ITM2A-201ENST00000373298 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.61
ITM2A-201ENST00000373298 TRIM75PA6NK02 468 aa11.27□□□□□ -0.61
ITM2A-201ENST00000373298 KDM4AO75164 1064 aa11.27□□□□□ -0.61
ITM2A-201ENST00000373298 PDE4BQ07343 736 aa11.27□□□□□ -0.61
ITM2A-201ENST00000373298 SPP2Q13103 211 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms