RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 KANK3Q6NY19 840 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 TOM1L2Q6ZVM7 507 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 HELBQ8NG08 1087 aaPredicted RBP15.51■□□□□ 0.07
USP49-201ENST00000373006 SPATA20Q8TB22 786 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 NUP88Q99567 741 aaPredicted RBP15.51■□□□□ 0.07
USP49-201ENST00000373006 EPB41L4AQ9HCS5 686 aaPredicted RBP15.51■□□□□ 0.07
USP49-201ENST00000373006 POTEB2H3BUK9 544 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 CHRM1P11229 460 aaPredicted RBP15.51■□□□□ 0.07
USP49-201ENST00000373006 DPYDQ12882 1025 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 CUL4BQ13620 913 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 IFNL3Q8IZI9 196 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 WASF1Q92558 559 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 PAGE5Q96GU1 130 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 ARMT1Q9H993 441 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 TFR2Q9UP52 801 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 N4BP3O15049 544 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 PRKAB2O43741 272 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 EARS2Q5JPH6 523 aaKnown RBP15.5■□□□□ 0.07
USP49-201ENST00000373006 GOLGA6L1Q8N7Z2 621 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 BLZF1Q9H2G9 400 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 FOXP1Q9H334 677 aaPredicted RBP15.5■□□□□ 0.07
USP49-201ENST00000373006 STRN4Q9NRL3 753 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 GUCA1BQ9UMX6 200 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 CTNND2Q9UQB3 1225 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 LIFRP42702 1097 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 CNGA4Q8IV77 575 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 GREM2Q9H772 168 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 FAM204AQ9H8W3 233 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 HDAC6Q9UBN7 1215 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 SNAP23O00161 211 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 MBD4O95243 580 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 ITGA6P23229 1130 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 TCIRG1Q13488 830 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 CDKAL1Q5VV42 579 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 ZNF579Q8NAF0 562 aaKnown RBP15.5■□□□□ 0.07
USP49-201ENST00000373006 SYMPKQ92797 1274 aaKnown RBP15.5■□□□□ 0.07
USP49-201ENST00000373006 TBC1D2BQ9UPU7 963 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 MAPK8IP1Q9UQF2 711 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 RIPOR2Q9Y4F9 1068 aa15.5■□□□□ 0.07
USP49-201ENST00000373006 PPP1R3GB7ZBB8 358 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 UBE3CQ15386 1083 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 MFSD6Q6ZSS7 791 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 CRACR2BQ8N4Y2 399 aaPredicted RBP15.49■□□□□ 0.07
USP49-201ENST00000373006 CHP1Q99653 195 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 HINFPQ9BQA5 517 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 MYO6Q9UM54 1294 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 TTF2Q9UNY4 1162 aaKnown RBP15.49■□□□□ 0.07
USP49-201ENST00000373006 WNT7AO00755 349 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 PRDM1O75626 825 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 ZMYND10O75800 440 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 IVLP07476 585 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 ARHGAP25P42331 645 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 MAGEB6Q8N7X4 407 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 IQUBQ8NA54 791 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 ISCA1Q9BUE6 129 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 ABHD10Q9NUJ1 306 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 TAB2Q9NYJ8 693 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 VPS54Q9P1Q0 977 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 KCNG1Q9UIX4 513 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 STK36Q9NRP7 1315 aa15.49■□□□□ 0.07
USP49-201ENST00000373006 SRGAP2O75044 1071 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 PIP4K2BP78356 416 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 WTAPQ15007 396 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 KRT31Q15323 416 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 ICE2Q659A1 982 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 LRRC31Q6UY01 552 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 RIN2Q8WYP3 895 aaPredicted RBP15.48■□□□□ 0.07
USP49-201ENST00000373006 CTAGE1Q96RT6 745 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 TTF1Q15361 905 aaPredicted RBP15.48■□□□□ 0.07
USP49-201ENST00000373006 CNPY4Q8N129 248 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 TTLL11Q8NHH1 800 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 CEP131Q9UPN4 1083 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 PATL2C9JE40 543 aaKnown RBP15.48■□□□□ 0.07
USP49-201ENST00000373006 DEXIO95424 95 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 KRT9P35527 623 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 ZNF174Q15697 407 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 NOM1Q5C9Z4 860 aaKnown RBP15.48■□□□□ 0.07
USP49-201ENST00000373006 AKNAD1Q5T1N1 836 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 TMTC1Q8IUR5 882 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 SHISA4Q96DD7 197 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 SPEF2Q9C093 1822 aa15.48■□□□□ 0.07
USP49-201ENST00000373006 A0A0G2JS52 829 aa15.47■□□□□ 0.07
USP49-201ENST00000373006 TCRBV5S4A2TA0A5A2 114 aa15.47■□□□□ 0.07
USP49-201ENST00000373006 TRIM75PA6NK02 468 aa15.47■□□□□ 0.07
USP49-201ENST00000373006 WHAMMP3Q1A5X7 153 aa15.47■□□□□ 0.07
USP49-201ENST00000373006 TTC31Q49AM3 519 aaPredicted RBP15.47■□□□□ 0.07
USP49-201ENST00000373006 FAM71BQ8TC56 605 aa15.47■□□□□ 0.07
USP49-201ENST00000373006 CAPZA3Q96KX2 299 aa15.47■□□□□ 0.07
USP49-201ENST00000373006 JRKLQ9Y4A0 524 aa15.47■□□□□ 0.07
USP49-201ENST00000373006 EIF3CLB5ME19 914 aaKnown RBP15.47■□□□□ 0.07
USP49-201ENST00000373006 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
USP49-201ENST00000373006 FANCBQ8NB91 859 aa15.47■□□□□ 0.07
USP49-201ENST00000373006 EIF3CQ99613 913 aaKnown RBP15.47■□□□□ 0.07
USP49-201ENST00000373006 PES1O00541 588 aaKnown RBP15.46■□□□□ 0.07
USP49-201ENST00000373006 RNF40O75150 1001 aa15.46■□□□□ 0.07
USP49-201ENST00000373006 CSF1RP07333 972 aa15.46■□□□□ 0.07
USP49-201ENST00000373006 NOP2P46087 812 aaKnown RBP15.46■□□□□ 0.07
USP49-201ENST00000373006 TDO2P48775 406 aa15.46■□□□□ 0.07
USP49-201ENST00000373006 GBP3Q9H0R5 595 aa15.46■□□□□ 0.07
USP49-201ENST00000373006 MAP3K15Q6ZN16 1313 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms