RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PPP1R13BQ96KQ4 1090 aa10.07□□□□□ -0.8
ATG4A-203ENST00000372232 FAM163BP0C2L3 166 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 EVCP57679 992 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 CLDN10P78369 228 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 ECM1Q16610 540 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 LONRF2Q1L5Z9 754 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 LDLRAD1Q5T700 205 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 E4F1Q66K89 784 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-203ENST00000372232 PLBD2Q8NHP8 589 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 KLHDC4Q8TBB5 520 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 MICAL1Q8TDZ2 1067 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATG4A-203ENST00000372232 CCDC8Q9H0W5 538 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-203ENST00000372232 SIL1Q9H173 461 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 DNAI1Q9UI46 699 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 ODF2LQ9ULJ1 636 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 SNX14Q9Y5W7 946 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 EME2A4GXA9 379 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-203ENST00000372232 CCDC151A5D8V7 595 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 ERVV-2B6SEH9 535 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 RDXP35241 583 aaKnown RBP10.06□□□□□ -0.8
ATG4A-203ENST00000372232 SETDB1Q15047 1291 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 TBC1D25Q3MII6 688 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 ANO6Q4KMQ2 910 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 ANKRD18AQ8IVF6 992 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 PIK3R5Q8WYR1 880 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 FAM161BQ96MY7 647 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 COPRSQ9NQ92 184 aa10.06□□□□□ -0.8
ATG4A-203ENST00000372232 COL5A2P05997 1499 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 COL15A1P39059 1388 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 ZSCAN22P10073 491 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 RFX5P48382 616 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 BRD3Q15059 726 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 RABL6Q3YEC7 729 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 NBPF14Q5TI25 921 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 NOL8Q76FK4 1167 aaKnown RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 TRIM74Q86UV6 250 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 TRIM73Q86UV7 250 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 OGFOD1Q8N543 542 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 DRAXINQ8NBI3 349 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 ASB16Q96NS5 453 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 CDCA7Q9BWT1 371 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 SUDS3Q9H7L9 328 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 TLR7Q9NYK1 1049 aaKnown RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 ANAPC4Q9UJX5 808 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 A0A1B0GUA9 196 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 ATP5J2-PTCD1G3V325 749 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 PPFIA2O75334 1257 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 IL2RBP14784 551 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 ETF1P62495 437 aaKnown RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 RBM43Q6ZSC3 357 aaKnown RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 RSRC2Q7L4I2 434 aaKnown RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 UBE3BQ7Z3V4 1068 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 CNNM3Q8NE01 707 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 FAM71BQ8TC56 605 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 HNRNPLLQ8WVV9 542 aaKnown RBP10.05□□□□□ -0.8
ATG4A-203ENST00000372232 XAGE2Q96GT9 111 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 CARD6Q9BX69 1037 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 PARD6BQ9BYG5 372 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 PDE11AQ9HCR9 933 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 FAN1Q9Y2M0 1017 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 GLI3P10071 1580 aa10.05□□□□□ -0.8
ATG4A-203ENST00000372232 A0A087WZG4 1122 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 CAVIN2O95810 425 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 PECAM1P16284 738 aaPredicted RBP10.04□□□□□ -0.8
ATG4A-203ENST00000372232 HSPA1LP34931 641 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 MAGEA8P43361 318 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 CASP7P55210 303 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 GSDMDP57764 484 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 PTH1RQ03431 593 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 PTPN12Q05209 780 aaKnown RBP10.04□□□□□ -0.8
ATG4A-203ENST00000372232 PSMD2Q13200 908 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 IQCA1Q86XH1 822 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 BICD2Q8TD16 824 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 TTC14Q96N46 770 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 NUP62CLQ9H1M0 184 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 ATP6V1DQ9Y5K8 247 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 PARP4Q9UKK3 1724 aaKnown RBP10.04□□□□□ -0.8
ATG4A-203ENST00000372232 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
ATG4A-203ENST00000372232 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 FIBPO43427 364 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 NUDT7P0C024 238 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 PRPHP41219 470 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 FUT2Q10981 343 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 GORABQ5T7V8 394 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 ISM2Q6H9L7 571 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 CAPN12Q6ZSI9 719 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 AMOTL1Q8IY63 956 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 DHX38Q92620 1227 aaKnown RBP10.04□□□□□ -0.8
ATG4A-203ENST00000372232 KIAA1024Q9UPX6 916 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 FAM169AQ9Y6X4 670 aa10.04□□□□□ -0.8
ATG4A-203ENST00000372232 ATXN2Q99700 1313 aaKnown RBP10.03□□□□□ -0.8
ATG4A-203ENST00000372232 C19orf67A6NJJ6 358 aa10.03□□□□□ -0.8
ATG4A-203ENST00000372232 HIP1O00291 1037 aa10.03□□□□□ -0.8
ATG4A-203ENST00000372232 ICMTO60725 284 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms