RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 HOOK1Q9UJC3 728 aaKnown RBP23.6■■□□□ 1.37
VEGFA-204ENST00000372064 KRT2P35908 639 aa23.6■■□□□ 1.37
VEGFA-204ENST00000372064 C16orf45Q96MC5 204 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-204ENST00000372064 GPR101Q96P66 508 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-204ENST00000372064 RIOK3O14730 519 aaKnown RBP23.6■■□□□ 1.37
VEGFA-204ENST00000372064 SPTY2D1Q68D10 685 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-204ENST00000372064 MCM9Q9NXL9 1143 aa23.6■■□□□ 1.37
VEGFA-204ENST00000372064 MYO1BO43795 1136 aa23.59■■□□□ 1.37
VEGFA-204ENST00000372064 USP17L8P0C7I0 530 aa23.59■■□□□ 1.37
VEGFA-204ENST00000372064 CNTNAP5Q8WYK1 1306 aa23.59■■□□□ 1.37
VEGFA-204ENST00000372064 FOXN1O15353 648 aa23.59■■□□□ 1.37
VEGFA-204ENST00000372064 FANCCQ00597 558 aa23.59■■□□□ 1.37
VEGFA-204ENST00000372064 EARS2Q5JPH6 523 aaKnown RBP23.59■■□□□ 1.37
VEGFA-204ENST00000372064 MTERF4Q7Z6M4 381 aaKnown RBP23.59■■□□□ 1.37
VEGFA-204ENST00000372064 LEMD3Q9Y2U8 911 aa23.59■■□□□ 1.37
VEGFA-204ENST00000372064 BMP6P22004 513 aa23.58■■□□□ 1.37
VEGFA-204ENST00000372064 LMOD1P29536 600 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-204ENST00000372064 DHX8Q14562 1220 aaKnown RBP23.58■■□□□ 1.37
VEGFA-204ENST00000372064 POSTNQ15063 836 aa23.58■■□□□ 1.37
VEGFA-204ENST00000372064 OLFM4Q6UX06 510 aa23.58■■□□□ 1.37
VEGFA-204ENST00000372064 TNFRSF25Q93038 417 aa23.58■■□□□ 1.37
VEGFA-204ENST00000372064 SARSP49591 514 aaKnown RBP23.58■■□□□ 1.36
VEGFA-204ENST00000372064 TPD52L1Q16890 204 aaPredicted RBP23.58■■□□□ 1.36
VEGFA-204ENST00000372064 CCDC150Q8NCX0 1101 aa23.58■■□□□ 1.36
VEGFA-204ENST00000372064 POLR2DO15514 142 aaKnown RBP23.57■■□□□ 1.36
VEGFA-204ENST00000372064 LDHBP07195 334 aaKnown RBP23.57■■□□□ 1.36
VEGFA-204ENST00000372064 TNNT1P13805 278 aa23.57■■□□□ 1.36
VEGFA-204ENST00000372064 NPY5RQ15761 445 aa23.57■■□□□ 1.36
VEGFA-204ENST00000372064 GRIK5Q16478 980 aa23.57■■□□□ 1.36
VEGFA-204ENST00000372064 PRR5LQ6MZQ0 368 aa23.57■■□□□ 1.36
VEGFA-204ENST00000372064 SRBD1Q8N5C6 995 aaKnown RBP23.57■■□□□ 1.36
VEGFA-204ENST00000372064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.57■■□□□ 1.36
VEGFA-204ENST00000372064 TRIM75PA6NK02 468 aa23.57■■□□□ 1.36
VEGFA-204ENST00000372064 TSPY2A6NKD2 308 aa23.57■■□□□ 1.36
VEGFA-204ENST00000372064 PDE4BQ07343 736 aa23.57■■□□□ 1.36
VEGFA-204ENST00000372064 MEX3CQ5U5Q3 659 aaKnown RBP23.57■■□□□ 1.36
VEGFA-204ENST00000372064 WDR66Q8TBY9 1149 aa23.57■■□□□ 1.36
VEGFA-204ENST00000372064 ACTN4O43707 911 aaKnown RBP23.56■■□□□ 1.36
VEGFA-204ENST00000372064 ATP1A3P13637 1013 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 XDHP47989 1333 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 NT5C2P49902 561 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 TMC6Q7Z403 805 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 CTCFLQ8NI51 663 aaPredicted RBP23.56■■□□□ 1.36
VEGFA-204ENST00000372064 CSRNP2Q9H175 543 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 MKRN1Q9UHC7 482 aaKnown RBP23.56■■□□□ 1.36
VEGFA-204ENST00000372064 SERTAD1Q9UHV2 236 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 DIXDC1Q155Q3 683 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 MAN1B1Q9UKM7 699 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 KANK3Q6NY19 840 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 ARMCX5Q6P1M9 558 aa23.56■■□□□ 1.36
VEGFA-204ENST00000372064 USP27XA6NNY8 438 aa23.55■■□□□ 1.36
VEGFA-204ENST00000372064 CTIFO43310 598 aaKnown RBP23.55■■□□□ 1.36
VEGFA-204ENST00000372064 NYAP1Q6ZVC0 841 aa23.55■■□□□ 1.36
VEGFA-204ENST00000372064 USP49Q70CQ1 688 aa23.55■■□□□ 1.36
VEGFA-204ENST00000372064 SH3RF3Q8TEJ3 882 aaPredicted RBP23.55■■□□□ 1.36
VEGFA-204ENST00000372064 BMP15O95972 392 aa23.55■■□□□ 1.36
VEGFA-204ENST00000372064 USP5P45974 858 aa23.55■■□□□ 1.36
VEGFA-204ENST00000372064 RCSD1Q6JBY9 416 aa23.55■■□□□ 1.36
VEGFA-204ENST00000372064 BRMS1Q9HCU9 246 aa23.55■■□□□ 1.36
VEGFA-204ENST00000372064 PAXBP1Q9Y5B6 917 aa23.55■■□□□ 1.36
VEGFA-204ENST00000372064 BAZ2BQ9UIF8 2168 aaKnown RBP23.54■■□□□ 1.36
VEGFA-204ENST00000372064 PRR29P0C7W0 189 aa23.54■■□□□ 1.36
VEGFA-204ENST00000372064 NOM1Q5C9Z4 860 aaKnown RBP23.54■■□□□ 1.36
VEGFA-204ENST00000372064 SEPT12Q8IYM1 358 aa23.54■■□□□ 1.36
VEGFA-204ENST00000372064 ZNF710Q8N1W2 664 aa23.54■■□□□ 1.36
VEGFA-204ENST00000372064 SPATA20Q8TB22 786 aa23.54■■□□□ 1.36
VEGFA-204ENST00000372064 C12orf60Q5U649 245 aa23.54■■□□□ 1.36
VEGFA-204ENST00000372064 CCAR2Q8N163 923 aaKnown RBP23.54■■□□□ 1.36
VEGFA-204ENST00000372064 TRIML1Q8N9V2 468 aa23.54■■□□□ 1.36
VEGFA-204ENST00000372064 TSC1Q92574 1164 aa23.54■■□□□ 1.36
VEGFA-204ENST00000372064 AFF2P51816 1311 aa23.54■■□□□ 1.36
VEGFA-204ENST00000372064 WNT7AO00755 349 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 CBFA2T2O43439 604 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 MORC3Q14149 939 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 PDILTQ8N807 584 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 DYNLL2Q96FJ2 89 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 ROBO3Q96MS0 1386 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 KCNJ6P48051 423 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 GPSM2P81274 684 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 C15orf52Q6ZUT6 534 aaKnown RBP23.53■■□□□ 1.36
VEGFA-204ENST00000372064 ZNF804AQ7Z570 1209 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 RPGRQ92834 1020 aaKnown RBP23.53■■□□□ 1.36
VEGFA-204ENST00000372064 MLKLQ8NB16 471 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 FERMT2Q96AC1 680 aa23.53■■□□□ 1.36
VEGFA-204ENST00000372064 TFAP4Q01664 338 aa23.52■■□□□ 1.36
VEGFA-204ENST00000372064 SMARCE1Q969G3 411 aa23.52■■□□□ 1.36
VEGFA-204ENST00000372064 BCL11BQ9C0K0 894 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-204ENST00000372064 GYS1P13807 737 aa23.52■■□□□ 1.36
VEGFA-204ENST00000372064 VEGFAP15692 232 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-204ENST00000372064 ADRA2BP18089 450 aa23.52■■□□□ 1.36
VEGFA-204ENST00000372064 UBASH3AP57075 661 aa23.52■■□□□ 1.36
VEGFA-204ENST00000372064 FANCLQ9NW38 375 aa23.52■■□□□ 1.36
VEGFA-204ENST00000372064 ONECUT3O60422 494 aaPredicted RBP23.51■■□□□ 1.35
VEGFA-204ENST00000372064 SFPQP23246 707 aaKnown RBP eCLIP23.51■■□□□ 1.35
VEGFA-204ENST00000372064 PFKFB3Q16875 520 aaPredicted RBP23.51■■□□□ 1.35
VEGFA-204ENST00000372064 CEP135Q66GS9 1140 aa23.51■■□□□ 1.35
VEGFA-204ENST00000372064 GRAMD1CQ8IYS0 662 aa23.51■■□□□ 1.35
VEGFA-204ENST00000372064 ANKS1AQ92625 1134 aa23.51■■□□□ 1.35
VEGFA-204ENST00000372064 DPF2Q92785 391 aa23.51■■□□□ 1.35
VEGFA-204ENST00000372064 SCG2P13521 617 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms