RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CLEC10AQ8IUN9 316 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 ZNF444Q8N0Y2 327 aaPredicted RBP13.46□□□□□ -0.25
PDE6C-201ENST00000371447 CPLX3Q8WVH0 158 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.25
PDE6C-201ENST00000371447 AFF2P51816 1311 aa13.46□□□□□ -0.26
PDE6C-201ENST00000371447 CUTAO60888 179 aa13.46□□□□□ -0.26
PDE6C-201ENST00000371447 TROAPQ12815 778 aa13.46□□□□□ -0.26
PDE6C-201ENST00000371447 DHX8Q14562 1220 aaKnown RBP13.46□□□□□ -0.26
PDE6C-201ENST00000371447 PKN1Q16512 942 aa13.46□□□□□ -0.26
PDE6C-201ENST00000371447 TPM3P06753 285 aa13.45□□□□□ -0.26
PDE6C-201ENST00000371447 RILPL1Q5EBL4 403 aa13.45□□□□□ -0.26
PDE6C-201ENST00000371447 RESP18Q5W5W9 173 aa13.45□□□□□ -0.26
PDE6C-201ENST00000371447 PRR5LQ6MZQ0 368 aa13.45□□□□□ -0.26
PDE6C-201ENST00000371447 SERPINB2P05120 415 aa13.45□□□□□ -0.26
PDE6C-201ENST00000371447 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
PDE6C-201ENST00000371447 CNTNAP4Q9C0A0 1308 aa13.45□□□□□ -0.26
PDE6C-201ENST00000371447 SPEF2Q9C093 1822 aa13.45□□□□□ -0.26
PDE6C-201ENST00000371447 BCL9LQ86UU0 1499 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 G3V3G9 751 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 GTF2IP78347 998 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 PTGDRQ13258 359 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 POSTNQ15063 836 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 MFSD14BQ5SR56 506 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 PPP6R2O75170 966 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 BMP6P22004 513 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 SCNN1DP51172 638 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 SYMPKQ92797 1274 aaKnown RBP13.44□□□□□ -0.26
PDE6C-201ENST00000371447 SMARCE1Q969G3 411 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 BRIP1Q9BX63 1249 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 FBXO2Q9UK22 296 aaPredicted RBP13.44□□□□□ -0.26
PDE6C-201ENST00000371447 MYH3P11055 1940 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 PES1O00541 588 aaKnown RBP13.44□□□□□ -0.26
PDE6C-201ENST00000371447 CAVIN2O95810 425 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 SFPQP23246 707 aaKnown RBP eCLIP13.44□□□□□ -0.26
PDE6C-201ENST00000371447 HSPA1LP34931 641 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 SLC10A5Q5PT55 438 aa13.44□□□□□ -0.26
PDE6C-201ENST00000371447 BBXQ8WY36 941 aaPredicted RBP13.44□□□□□ -0.26
PDE6C-201ENST00000371447 PHLPP1O60346 1717 aa13.43□□□□□ -0.26
PDE6C-201ENST00000371447 A0A087X0B3 334 aa13.43□□□□□ -0.26
PDE6C-201ENST00000371447 BTDP43251 543 aa13.43□□□□□ -0.26
PDE6C-201ENST00000371447 GRAPQ13588 217 aa13.43□□□□□ -0.26
PDE6C-201ENST00000371447 GRAPLQ8TC17 118 aaPredicted RBP13.43□□□□□ -0.26
PDE6C-201ENST00000371447 UBA5Q9GZZ9 404 aa13.43□□□□□ -0.26
PDE6C-201ENST00000371447 FOXP1Q9H334 677 aaPredicted RBP13.43□□□□□ -0.26
PDE6C-201ENST00000371447 FMR1Q06787 632 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDE6C-201ENST00000371447 AMOTL1Q8IY63 956 aa13.43□□□□□ -0.26
PDE6C-201ENST00000371447 TEX11Q8IYF3 940 aa13.43□□□□□ -0.26
PDE6C-201ENST00000371447 QTRT2Q9H974 415 aaKnown RBP13.43□□□□□ -0.26
PDE6C-201ENST00000371447 NFE2L3Q9Y4A8 694 aa13.43□□□□□ -0.26
PDE6C-201ENST00000371447 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 MYL5Q02045 173 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 NCAPHQ15003 741 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 TTC38Q5R3I4 469 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 TMTC3Q6ZXV5 915 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 ZBTB9Q96C00 473 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 MRFAP1L1Q96HT8 127 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 RNF26Q9BY78 433 aaPredicted RBP13.42□□□□□ -0.26
PDE6C-201ENST00000371447 SAMSN1Q9NSI8 373 aaKnown RBP13.42□□□□□ -0.26
PDE6C-201ENST00000371447 MAN1B1Q9UKM7 699 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 BAZ2AQ9UIF9 1905 aaKnown RBP13.42□□□□□ -0.26
PDE6C-201ENST00000371447 PTPREP23469 700 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 USP17L2Q6R6M4 530 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 SPTLC3Q9NUV7 552 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 HPSEQ9Y251 543 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 PP2D1A8MPX8 630 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 BAG3O95817 575 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 PTPN14Q15678 1187 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 IL17RBQ9NRM6 502 aa13.42□□□□□ -0.26
PDE6C-201ENST00000371447 RBM6P78332 1123 aaKnown RBP13.41□□□□□ -0.26
PDE6C-201ENST00000371447 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.41□□□□□ -0.26
PDE6C-201ENST00000371447 ATP8A2Q9NTI2 1148 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 GGA1Q9UJY5 639 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 SCG2P13521 617 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 CACNB3P54284 484 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 ADKP55263 362 aaKnown RBP13.41□□□□□ -0.26
PDE6C-201ENST00000371447 CEP135Q66GS9 1140 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 SPTY2D1Q68D10 685 aaPredicted RBP13.41□□□□□ -0.26
PDE6C-201ENST00000371447 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
PDE6C-201ENST00000371447 CD209Q9NNX6 404 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 FRMPD2Q68DX3 1309 aaPredicted RBP13.41□□□□□ -0.26
PDE6C-201ENST00000371447 ST5P78524 1137 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 INF2Q27J81 1249 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 POLLQ9UGP5 575 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 HOOK1Q9UJC3 728 aaKnown RBP13.41□□□□□ -0.26
PDE6C-201ENST00000371447 CEP131Q9UPN4 1083 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 STK36Q9NRP7 1315 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 MYH2Q9UKX2 1941 aa13.41□□□□□ -0.26
PDE6C-201ENST00000371447 GYS1P13807 737 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 FNBP4Q8N3X1 1017 aaPredicted RBP13.4□□□□□ -0.26
PDE6C-201ENST00000371447 WDR66Q8TBY9 1149 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 ARPP21Q9UBL0 812 aaPredicted RBP13.4□□□□□ -0.26
PDE6C-201ENST00000371447 XDHP47989 1333 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms