RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CSRNP2Q9H175 543 aa33.14■■■□□ 2.9
SSBP3-204ENST00000371320 MCM9Q9NXL9 1143 aa33.14■■■□□ 2.9
SSBP3-204ENST00000371320 MORC2Q9Y6X9 1032 aaPredicted RBP33.14■■■□□ 2.9
SSBP3-204ENST00000371320 DLEC1Q9Y238 1755 aa33.13■■■□□ 2.89
SSBP3-204ENST00000371320 TSPY2A6NKD2 308 aa33.13■■■□□ 2.89
SSBP3-204ENST00000371320 GRAPQ13588 217 aa33.13■■■□□ 2.89
SSBP3-204ENST00000371320 EARS2Q5JPH6 523 aaKnown RBP33.13■■■□□ 2.89
SSBP3-204ENST00000371320 MTERF4Q7Z6M4 381 aaKnown RBP33.13■■■□□ 2.89
SSBP3-204ENST00000371320 SRBD1Q8N5C6 995 aaKnown RBP33.13■■■□□ 2.89
SSBP3-204ENST00000371320 GRAPLQ8TC17 118 aaPredicted RBP33.13■■■□□ 2.89
SSBP3-204ENST00000371320 CNTNAP5Q8WYK1 1306 aa33.13■■■□□ 2.89
SSBP3-204ENST00000371320 DHX8Q14562 1220 aaKnown RBP33.13■■■□□ 2.89
SSBP3-204ENST00000371320 LEMD3Q9Y2U8 911 aa33.13■■■□□ 2.89
SSBP3-204ENST00000371320 MAST2Q6P0Q8 1798 aa33.12■■■□□ 2.89
SSBP3-204ENST00000371320 BMP6P22004 513 aa33.12■■■□□ 2.89
SSBP3-204ENST00000371320 KANK3Q6NY19 840 aa33.12■■■□□ 2.89
SSBP3-204ENST00000371320 WDR66Q8TBY9 1149 aa33.12■■■□□ 2.89
SSBP3-204ENST00000371320 MAN1B1Q9UKM7 699 aa33.12■■■□□ 2.89
SSBP3-204ENST00000371320 LDHBP07195 334 aaKnown RBP33.11■■■□□ 2.89
SSBP3-204ENST00000371320 PDILTQ8N807 584 aa33.11■■■□□ 2.89
SSBP3-204ENST00000371320 USP27XA6NNY8 438 aa33.11■■■□□ 2.89
SSBP3-204ENST00000371320 CBFA2T2O43439 604 aa33.11■■■□□ 2.89
SSBP3-204ENST00000371320 MYO1BO43795 1136 aa33.11■■■□□ 2.89
SSBP3-204ENST00000371320 SERPINC1P01008 464 aa33.11■■■□□ 2.89
SSBP3-204ENST00000371320 NFIXQ14938 502 aa33.11■■■□□ 2.89
SSBP3-204ENST00000371320 NT5DC1Q5TFE4 455 aa33.11■■■□□ 2.89
SSBP3-204ENST00000371320 SMARCE1Q969G3 411 aa33.11■■■□□ 2.89
SSBP3-204ENST00000371320 USP17L8P0C7I0 530 aa33.1■■■□□ 2.89
SSBP3-204ENST00000371320 UBASH3AP57075 661 aa33.1■■■□□ 2.89
SSBP3-204ENST00000371320 USP49Q70CQ1 688 aa33.1■■■□□ 2.89
SSBP3-204ENST00000371320 PAXBP1Q9Y5B6 917 aa33.1■■■□□ 2.89
SSBP3-204ENST00000371320 THSD7AQ9UPZ6 1657 aa33.1■■■□□ 2.89
SSBP3-204ENST00000371320 TNRC6CQ9HCJ0 1690 aaKnown RBP33.1■■■□□ 2.89
SSBP3-204ENST00000371320 ACTN4O43707 911 aaKnown RBP33.09■■■□□ 2.89
SSBP3-204ENST00000371320 BMP15O95972 392 aa33.09■■■□□ 2.89
SSBP3-204ENST00000371320 PRR29P0C7W0 189 aa33.09■■■□□ 2.89
SSBP3-204ENST00000371320 SFPQP23246 707 aaKnown RBP eCLIP33.09■■■□□ 2.89
SSBP3-204ENST00000371320 ARMCX5Q6P1M9 558 aa33.09■■■□□ 2.89
SSBP3-204ENST00000371320 CNBD1Q8NA66 436 aa33.09■■■□□ 2.89
SSBP3-204ENST00000371320 LAMB1P07942 1786 aa33.09■■■□□ 2.89
SSBP3-204ENST00000371320 FAM196AQ6ZSG2 479 aa33.09■■■□□ 2.89
SSBP3-204ENST00000371320 FANCLQ9NW38 375 aa33.09■■■□□ 2.89
SSBP3-204ENST00000371320 CCDC88AQ3V6T2 1871 aa33.08■■■□□ 2.89
SSBP3-204ENST00000371320 USP5P45974 858 aa33.08■■■□□ 2.89
SSBP3-204ENST00000371320 SARSP49591 514 aaKnown RBP33.08■■■□□ 2.89
SSBP3-204ENST00000371320 SLC4A8Q2Y0W8 1093 aa33.08■■■□□ 2.89
SSBP3-204ENST00000371320 TNFRSF25Q93038 417 aa33.08■■■□□ 2.89
SSBP3-204ENST00000371320 IGSF3O75054 1194 aa33.08■■■□□ 2.89
SSBP3-204ENST00000371320 NPY5RQ15761 445 aa33.08■■■□□ 2.89
SSBP3-204ENST00000371320 CEP135Q66GS9 1140 aa33.08■■■□□ 2.89
SSBP3-204ENST00000371320 GRAMD1CQ8IYS0 662 aa33.08■■■□□ 2.89
SSBP3-204ENST00000371320 CCAR2Q8N163 923 aaKnown RBP33.08■■■□□ 2.89
SSBP3-204ENST00000371320 KCND1Q9NSA2 647 aa33.08■■■□□ 2.89
SSBP3-204ENST00000371320 C12orf60Q5U649 245 aa33.07■■■□□ 2.88
SSBP3-204ENST00000371320 SLC51AQ86UW1 340 aa33.07■■■□□ 2.88
SSBP3-204ENST00000371320 MLKLQ8NB16 471 aa33.07■■■□□ 2.88
SSBP3-204ENST00000371320 FERMT2Q96AC1 680 aa33.07■■■□□ 2.88
SSBP3-204ENST00000371320 DACH1Q9UI36 760 aa33.07■■■□□ 2.88
SSBP3-204ENST00000371320 XDHP47989 1333 aa33.07■■■□□ 2.88
SSBP3-204ENST00000371320 SPATA31A6Q5VVP1 1343 aa33.07■■■□□ 2.88
SSBP3-204ENST00000371320 SCG2P13521 617 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 PTPN14Q15678 1187 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 CFAP100Q494V2 611 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 RCSD1Q6JBY9 416 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 TRMT1Q9NXH9 659 aaKnown RBP33.06■■■□□ 2.88
SSBP3-204ENST00000371320 KIAA1551Q9HCM1 1747 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 KIF5BP33176 963 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 GSTO1P78417 241 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 MORC3Q14149 939 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 ZNF804AQ7Z570 1209 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 TRIML1Q8N9V2 468 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 DPF2Q92785 391 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 CCDC34Q96HJ3 373 aa33.06■■■□□ 2.88
SSBP3-204ENST00000371320 MKRN1Q9UHC7 482 aaKnown RBP33.06■■■□□ 2.88
SSBP3-204ENST00000371320 NRDCO43847 1150 aa33.05■■■□□ 2.88
SSBP3-204ENST00000371320 TFAP4Q01664 338 aa33.05■■■□□ 2.88
SSBP3-204ENST00000371320 TTC38Q5R3I4 469 aa33.05■■■□□ 2.88
SSBP3-204ENST00000371320 SH3RF3Q8TEJ3 882 aaPredicted RBP33.05■■■□□ 2.88
SSBP3-204ENST00000371320 KAT14Q9H8E8 782 aa33.05■■■□□ 2.88
SSBP3-204ENST00000371320 TAF1LQ8IZX4 1826 aa33.05■■■□□ 2.88
SSBP3-204ENST00000371320 NLRP5P59047 1200 aa33.05■■■□□ 2.88
SSBP3-204ENST00000371320 ZNF174Q15697 407 aa33.05■■■□□ 2.88
SSBP3-204ENST00000371320 NOM1Q5C9Z4 860 aaKnown RBP33.05■■■□□ 2.88
SSBP3-204ENST00000371320 NYAP1Q6ZVC0 841 aa33.05■■■□□ 2.88
SSBP3-204ENST00000371320 ZNF710Q8N1W2 664 aa33.05■■■□□ 2.88
SSBP3-204ENST00000371320 HSPA1LP34931 641 aa33.04■■■□□ 2.88
SSBP3-204ENST00000371320 PFKFB3Q16875 520 aaPredicted RBP33.04■■■□□ 2.88
SSBP3-204ENST00000371320 DHX58Q96C10 678 aa33.04■■■□□ 2.88
SSBP3-204ENST00000371320 EPSTI1Q96J88 318 aa33.04■■■□□ 2.88
SSBP3-204ENST00000371320 WNT7AO00755 349 aa33.03■■■□□ 2.88
SSBP3-204ENST00000371320 CTIFO43310 598 aaKnown RBP33.03■■■□□ 2.88
SSBP3-204ENST00000371320 BAG3O95817 575 aa33.03■■■□□ 2.88
SSBP3-204ENST00000371320 NT5C2P49902 561 aa33.03■■■□□ 2.88
SSBP3-204ENST00000371320 ZNF592Q92610 1267 aa33.03■■■□□ 2.88
SSBP3-204ENST00000371320 DGKHQ86XP1 1220 aa33.03■■■□□ 2.88
SSBP3-204ENST00000371320 LY75O60449 1722 aa33.03■■■□□ 2.88
SSBP3-204ENST00000371320 DIXDC1Q155Q3 683 aa33.02■■■□□ 2.88
SSBP3-204ENST00000371320 AMOTL1Q8IY63 956 aa33.02■■■□□ 2.88
SSBP3-204ENST00000371320 SPATA20Q8TB22 786 aa33.02■■■□□ 2.88
SSBP3-204ENST00000371320 SYMPKQ92797 1274 aaKnown RBP33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms