RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 Q7L0L9 218 aa13.53□□□□□ -0.24
EXOSC1-204ENST00000370902 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
EXOSC1-204ENST00000370902 APBA2Q99767 749 aa13.53□□□□□ -0.24
EXOSC1-204ENST00000370902 RIOK1Q9BRS2 568 aaKnown RBP13.53□□□□□ -0.24
EXOSC1-204ENST00000370902 EHD4Q9H223 541 aa13.53□□□□□ -0.24
EXOSC1-204ENST00000370902 ZKSCAN1P17029 563 aaPredicted RBP13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 VCAM1P19320 739 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 CYP7A1P22680 504 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 SHMT1P34896 483 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 GABPAQ06546 454 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 CCDC158Q5M9N0 1113 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L2Q6R6M4 530 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 LBX2Q6XYB7 198 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 CRACR2BQ8N4Y2 399 aaPredicted RBP13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 ACER1Q8TDN7 264 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 PAGR1Q9BTK6 254 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 BTBD7Q9P203 1132 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 MYH7P12883 1935 aa13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 GREB1LQ9C091 1923 aaPredicted RBP13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 BAZ2AQ9UIF9 1905 aaKnown RBP13.52□□□□□ -0.25
EXOSC1-204ENST00000370902 SPDYE16A6NNV3 312 aaPredicted RBP13.51□□□□□ -0.25
EXOSC1-204ENST00000370902 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
EXOSC1-204ENST00000370902 RGS2P41220 211 aa13.51□□□□□ -0.25
EXOSC1-204ENST00000370902 PLCD1P51178 756 aa13.51□□□□□ -0.25
EXOSC1-204ENST00000370902 ZKSCAN2Q63HK3 967 aa13.51□□□□□ -0.25
EXOSC1-204ENST00000370902 PLEKHH3Q7Z736 793 aa13.51□□□□□ -0.25
EXOSC1-204ENST00000370902 TDHQ8IZJ6 230 aa13.51□□□□□ -0.25
EXOSC1-204ENST00000370902 TRPV1Q8NER1 839 aa13.51□□□□□ -0.25
EXOSC1-204ENST00000370902 KIAA1683Q9H0B3 1180 aa13.51□□□□□ -0.25
EXOSC1-204ENST00000370902 HLA-DOAP06340 250 aa13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 MAP2K5Q13163 448 aa13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 GRB14Q14449 540 aa13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 ZYXQ15942 572 aaKnown RBP13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 CEP85Q6P2H3 762 aa13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 CATSPERGQ6ZRH7 1159 aa13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 NPLOC4Q8TAT6 608 aa13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 GTF3C2Q8WUA4 911 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 SERPINB13Q9UIV8 391 aa13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 RABGAP1Q9Y3P9 1069 aa13.5□□□□□ -0.25
EXOSC1-204ENST00000370902 A0A1W2PRG0 241 aa13.49□□□□□ -0.25
EXOSC1-204ENST00000370902 IDH1O75874 414 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-204ENST00000370902 HOXC6P09630 235 aa13.49□□□□□ -0.25
EXOSC1-204ENST00000370902 PTPREP23469 700 aa13.49□□□□□ -0.25
EXOSC1-204ENST00000370902 PDE3AQ14432 1141 aa13.49□□□□□ -0.25
EXOSC1-204ENST00000370902 KIAA1755Q5JYT7 1200 aa13.49□□□□□ -0.25
EXOSC1-204ENST00000370902 TRMT44Q8IYL2 757 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-204ENST00000370902 MTMR10Q9NXD2 777 aa13.49□□□□□ -0.25
EXOSC1-204ENST00000370902 MUC3AQ02505 3323 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 CYBAP13498 195 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 OS9Q13438 667 aaPredicted RBP13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 DEFB123Q8N688 67 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 SLC17A8Q8NDX2 589 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 ZNFX1Q9P2E3 1918 aaKnown RBP13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
EXOSC1-204ENST00000370902 TCRBV5S4A2TA0A5A2 114 aa13.47□□□□□ -0.25
EXOSC1-204ENST00000370902 SLC15A5A6NIM6 579 aa13.47□□□□□ -0.25
EXOSC1-204ENST00000370902 DLL1O00548 723 aa13.47□□□□□ -0.25
EXOSC1-204ENST00000370902 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
EXOSC1-204ENST00000370902 RPAP3Q9H6T3 665 aaPredicted RBP13.47□□□□□ -0.25
EXOSC1-204ENST00000370902 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
EXOSC1-204ENST00000370902 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 CYP2C19P33261 490 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 USP5P45974 858 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 SEPT2Q15019 361 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 RAB3GAP1Q15042 981 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 ABCB5Q2M3G0 1257 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 CERKLQ49MI3 558 aaPredicted RBP13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 CERS3Q8IU89 383 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 SIAH1Q8IUQ4 282 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 EDC3Q96F86 508 aaKnown RBP13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 FEZ1Q99689 392 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 UBE2OQ9C0C9 1292 aaKnown RBP13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 DDX20Q9UHI6 824 aaKnown RBP13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.25
EXOSC1-204ENST00000370902 CYP2D6P10635 497 aa13.45□□□□□ -0.26
EXOSC1-204ENST00000370902 PDE6AP16499 860 aa13.45□□□□□ -0.26
EXOSC1-204ENST00000370902 USP14P54578 494 aa13.45□□□□□ -0.26
EXOSC1-204ENST00000370902 MDM2Q00987 491 aaPredicted RBP13.45□□□□□ -0.26
EXOSC1-204ENST00000370902 CLEC10AQ8IUN9 316 aa13.45□□□□□ -0.26
EXOSC1-204ENST00000370902 ITPRIPQ8IWB1 547 aa13.45□□□□□ -0.26
EXOSC1-204ENST00000370902 SLC44A5Q8NCS7 719 aa13.45□□□□□ -0.26
EXOSC1-204ENST00000370902 GUCD1Q96NT3 240 aa13.45□□□□□ -0.26
EXOSC1-204ENST00000370902 MOV10L1Q9BXT6 1211 aaKnown RBP13.45□□□□□ -0.26
EXOSC1-204ENST00000370902 CHGBP05060 677 aa13.44□□□□□ -0.26
EXOSC1-204ENST00000370902 MAP3K12Q12852 859 aa13.44□□□□□ -0.26
EXOSC1-204ENST00000370902 SLFNL1Q499Z3 407 aa13.44□□□□□ -0.26
EXOSC1-204ENST00000370902 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
EXOSC1-204ENST00000370902 TTC6Q86TZ1 520 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms