RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CTNNA3Q9UI47 895 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 H7C1D1 291 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 M0R2C6 588 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 PLA2G6O60733 806 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 MUM1L1Q5H9M0 696 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 KRT26Q7Z3Y9 468 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 PUS7LQ9H0K6 701 aaKnown RBP8.11□□□□□ -1.11
CSDE1-204ENST00000369530 TTF2Q9UNY4 1162 aaKnown RBP8.11□□□□□ -1.11
CSDE1-204ENST00000369530 FRMPD4Q14CM0 1322 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 PDCD11Q14690 1871 aaKnown RBP8.1□□□□□ -1.11
CSDE1-204ENST00000369530 CELF2O95319 508 aaKnown RBP8.1□□□□□ -1.11
CSDE1-204ENST00000369530 HSPA1AP0DMV8 641 aaKnown RBP8.1□□□□□ -1.11
CSDE1-204ENST00000369530 HSPA1BP0DMV9 641 aaKnown RBP8.1□□□□□ -1.11
CSDE1-204ENST00000369530 KIAA0825Q8IV33 1275 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 C16orf71Q8IYS4 520 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-204ENST00000369530 OSBP2Q969R2 916 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 POTEFA5A3E0 1075 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 C12orf60Q5U649 245 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 ERC1Q8IUD2 1116 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 TEKT1Q969V4 418 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 CRISPLD2Q9H0B8 497 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 DCP1AQ9NPI6 582 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-204ENST00000369530 TCP11L1Q9NUJ3 509 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 MYH7BA7E2Y1 1941 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 ATP2A1O14983 1001 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 CA12O43570 354 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 MYCNP04198 464 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-204ENST00000369530 PDE6AP16499 860 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 PLCD1P51178 756 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 SLC35G1Q2M3R5 365 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 MORN1Q5T089 497 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 MORC4Q8TE76 937 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 MTMR8Q96EF0 704 aa8.1□□□□□ -1.11
CSDE1-204ENST00000369530 CTNND1O60716 968 aaKnown RBP8.09□□□□□ -1.11
CSDE1-204ENST00000369530 CCDC102AQ96A19 550 aa8.09□□□□□ -1.11
CSDE1-204ENST00000369530 CNNM1Q9NRU3 951 aa8.09□□□□□ -1.11
CSDE1-204ENST00000369530 ASTN1O14525 1302 aa8.09□□□□□ -1.11
CSDE1-204ENST00000369530 A0A1W2PRG0 241 aa8.09□□□□□ -1.11
CSDE1-204ENST00000369530 IFIT1P09914 478 aaKnown RBP8.09□□□□□ -1.11
CSDE1-204ENST00000369530 CAP2P40123 477 aa8.09□□□□□ -1.11
CSDE1-204ENST00000369530 KIF23Q02241 960 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-204ENST00000369530 CERS3Q8IU89 383 aa8.09□□□□□ -1.11
CSDE1-204ENST00000369530 KBTBD3Q8NAB2 608 aa8.09□□□□□ -1.11
CSDE1-204ENST00000369530 MYCBPQ99417 103 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-204ENST00000369530 EMILIN3Q9NT22 766 aa8.09□□□□□ -1.11
CSDE1-204ENST00000369530 TBC1D9Q6ZT07 1266 aa8.09□□□□□ -1.12
CSDE1-204ENST00000369530 ZNF771Q7L3S4 317 aaPredicted RBP8.09□□□□□ -1.12
CSDE1-204ENST00000369530 LCORLQ8N3X6 602 aa8.09□□□□□ -1.12
CSDE1-204ENST00000369530 ZGPATQ8N5A5 531 aaKnown RBP8.09□□□□□ -1.12
CSDE1-204ENST00000369530 GCC1Q96CN9 775 aa8.09□□□□□ -1.12
CSDE1-204ENST00000369530 LNPKQ9C0E8 428 aa8.09□□□□□ -1.12
CSDE1-204ENST00000369530 HERC5Q9UII4 1024 aaKnown RBP8.09□□□□□ -1.12
CSDE1-204ENST00000369530 BTDP43251 543 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 NOGQ13253 232 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 ANKRD45Q5TZF3 282 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 RCSD1Q6JBY9 416 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 SCYL3Q8IZE3 742 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 ZNF526Q8TF50 670 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-204ENST00000369530 RAI14Q9P0K7 980 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 EXOC6BQ9Y2D4 811 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 GJA3Q9Y6H8 435 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 PROCA1Q8NCQ7 364 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-204ENST00000369530 IL17RBQ9NRM6 502 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 SCAF8Q9UPN6 1271 aaKnown RBP8.08□□□□□ -1.12
CSDE1-204ENST00000369530 ZNF536O15090 1300 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 REC8O95072 547 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 PDE1AP54750 535 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 INHBEP58166 350 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 EDC3Q96F86 508 aaKnown RBP8.08□□□□□ -1.12
CSDE1-204ENST00000369530 RBSNQ9H1K0 784 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
CSDE1-204ENST00000369530 DNAJC25-GNG10A0A024R161 153 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 TRIM6-TRIM34B2RNG4 842 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 CXCL11O14625 94 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 DYNLL1P63167 89 aaKnown RBP8.07□□□□□ -1.12
CSDE1-204ENST00000369530 TSGA10IPQ3SY00 556 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 VWCEQ96DN2 955 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 TRIM34Q9BYJ4 488 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 USP34Q70CQ2 3546 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 GUCY2CP25092 1073 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 SATB1Q01826 763 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 CAVIN4Q5BKX8 364 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 MAMDC4Q6UXC1 1216 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 ANKRD13AQ8IZ07 590 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 CEP83Q9Y592 693 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 BTBD19C9JJ37 291 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 KIF1CO43896 1103 aaKnown RBP8.07□□□□□ -1.12
CSDE1-204ENST00000369530 LMOD1P29536 600 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-204ENST00000369530 CYP2C19P33261 490 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 MAP3K9P80192 1104 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 MAP2K1Q02750 393 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-204ENST00000369530 NDUFB9Q9Y6M9 179 aa8.07□□□□□ -1.12
CSDE1-204ENST00000369530 IRF5Q13568 498 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 AGXT2Q9BYV1 514 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 MAF1Q9H063 256 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 INPP5BP32019 993 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 PRAMEF18Q5VWM3 479 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 SIL1Q9H173 461 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 PAK6Q9NQU5 681 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-204ENST00000369530 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms