RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 FMNL1O95466 1100 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-201ENST00000369407 SYF2O95926 243 aaKnown RBP13.91□□□□□ -0.18
PHGDH-201ENST00000369407 MAGEA9P43362 315 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 FKBP15Q5T1M5 1219 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 HELBQ8NG08 1087 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-201ENST00000369407 PAGE5Q96GU1 130 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 MMS19Q96T76 1030 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 PRKAB2O43741 272 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 PBX1P40424 430 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 CUL4BQ13620 913 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 KRT31Q15323 416 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 FILIP1LQ4L180 1135 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 GPIHBP1Q8IV16 184 aa13.91□□□□□ -0.18
PHGDH-201ENST00000369407 SYMPKQ92797 1274 aaKnown RBP13.91□□□□□ -0.18
PHGDH-201ENST00000369407 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.181e-14■□□□□ 11
PHGDH-201ENST00000369407 CIAO1O76071 339 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 KRT9P35527 623 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 AIDAQ96BJ3 306 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 ABHD10Q9NUJ1 306 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 VPS54Q9P1Q0 977 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 JRKLQ9Y4A0 524 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 PPP1R3GB7ZBB8 358 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 SMIM22K7EJ46 135 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 ERCC5P28715 1186 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-201ENST00000369407 KRT28Q7Z3Y7 464 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 AFAP1L1Q8TED9 768 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 GEMIN8Q9NWZ8 242 aaKnown RBP13.9□□□□□ -0.18
PHGDH-201ENST00000369407 SRPRBQ9Y5M8 271 aaKnown RBP13.9□□□□□ -0.18
PHGDH-201ENST00000369407 C4AP0C0L4 1744 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 MEGF6O75095 1541 aa13.9□□□□□ -0.18
PHGDH-201ENST00000369407 CLGNO14967 610 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
PHGDH-201ENST00000369407 MYBL2P10244 700 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-201ENST00000369407 PIP4K2BP78356 416 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 ZNF174Q15697 407 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 RTN1Q16799 776 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 RILPL1Q5EBL4 403 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 CT47A1Q5JQC4 288 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-201ENST00000369407 CNGA4Q8IV77 575 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 NAA15Q9BXJ9 866 aaKnown RBP13.89□□□□□ -0.19
PHGDH-201ENST00000369407 EPB41L4AQ9HCS5 686 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-201ENST00000369407 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
PHGDH-201ENST00000369407 ZNF185O15231 689 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 GPTP24298 496 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 PHKA1P46020 1223 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 WHAMMP3Q1A5X7 153 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 CDKAL1Q5VV42 579 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 RRAGBQ5VZM2 374 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 TRIM22Q8IYM9 498 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 MICALL1Q8N3F8 863 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 CCDC148Q8NFR7 591 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 ZNF526Q8TF50 670 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-201ENST00000369407 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
PHGDH-201ENST00000369407 SHISA4Q96DD7 197 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 TMEM87BQ96K49 555 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 REXO2Q9Y3B8 237 aaKnown RBP13.89□□□□□ -0.19
PHGDH-201ENST00000369407 PDE6AP16499 860 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 GGCXP38435 758 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 PSEN1P49768 467 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 LDHAL6AQ6ZMR3 332 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 TRIML1Q8N9V2 468 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 NAPBQ9H115 298 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 DEF6Q9H4E7 631 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 POLD4Q9HCU8 107 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 STRN4Q9NRL3 753 aa13.89□□□□□ -0.19
PHGDH-201ENST00000369407 AMPD2Q01433 879 aa13.88□□□□□ -0.19
PHGDH-201ENST00000369407 IFIT5Q13325 482 aaKnown RBP13.88□□□□□ -0.19
PHGDH-201ENST00000369407 DNAJC21Q5F1R6 531 aaKnown RBP13.88□□□□□ -0.19
PHGDH-201ENST00000369407 MBD4O95243 580 aa13.88□□□□□ -0.19
PHGDH-201ENST00000369407 IFNAR1P17181 557 aa13.88□□□□□ -0.19
PHGDH-201ENST00000369407 CORO7P57737 925 aa13.88□□□□□ -0.19
PHGDH-201ENST00000369407 SPATA20Q8TB22 786 aa13.88□□□□□ -0.19
PHGDH-201ENST00000369407 SMARCC1Q92922 1105 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-201ENST00000369407 GBP3Q9H0R5 595 aa13.88□□□□□ -0.19
PHGDH-201ENST00000369407 SIPA1L3O60292 1781 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-201ENST00000369407 WDR19Q8NEZ3 1342 aa13.88□□□□□ -0.19
PHGDH-201ENST00000369407 LIG3P49916 1009 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 CTR9Q6PD62 1173 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 TMTC1Q8IUR5 882 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 CNNM1Q9NRU3 951 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 HPCAL4Q9UM19 191 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 ARFGEF2Q9Y6D5 1785 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 CCT5P48643 541 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 UBXN1Q04323 297 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 IFNL3Q8IZI9 196 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 STRBPQ96SI9 672 aaKnown RBP13.87□□□□□ -0.19
PHGDH-201ENST00000369407 KANK3Q6NY19 840 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 CYP26C1Q6V0L0 522 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 SGMS1Q86VZ5 419 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 MAGEB6Q8N7X4 407 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 GREM2Q9H772 168 aa13.87□□□□□ -0.19
PHGDH-201ENST00000369407 MKRN1Q9UHC7 482 aaKnown RBP13.87□□□□□ -0.19
PHGDH-201ENST00000369407 EPN1Q9Y6I3 576 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-201ENST00000369407 ARHGAP23Q9P227 1491 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 TRIM49BA6NDI0 452 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 RPS6KA5O75582 802 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms