RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 INTS4Q96HW7 963 aaKnown RBP19.92■□□□□ 0.78
SNX27-203ENST00000368843 GIPC1O14908 333 aa19.92■□□□□ 0.78
SNX27-203ENST00000368843 RDH13Q8NBN7 331 aa19.92■□□□□ 0.78
SNX27-203ENST00000368843 HAUS2Q9NVX0 235 aa19.92■□□□□ 0.78
SNX27-203ENST00000368843 PARD3Q8TEW0 1356 aa19.92■□□□□ 0.78
SNX27-203ENST00000368843 SNX14Q9Y5W7 946 aa19.92■□□□□ 0.78
SNX27-203ENST00000368843 IVLP07476 585 aa19.92■□□□□ 0.78
SNX27-203ENST00000368843 LRMPQ12912 555 aa19.92■□□□□ 0.78
SNX27-203ENST00000368843 GABPB2Q8TAK5 448 aaPredicted RBP19.92■□□□□ 0.78
SNX27-203ENST00000368843 OTUD7AQ8TE49 926 aaPredicted RBP19.92■□□□□ 0.78
SNX27-203ENST00000368843 CTTNBP2NLQ9P2B4 639 aa19.92■□□□□ 0.78
SNX27-203ENST00000368843 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
SNX27-203ENST00000368843 C8orf34Q49A92 452 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 MIER3Q7Z3K6 550 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 CD2APQ9Y5K6 639 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 GAS7O60861 476 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 CUTAO60888 179 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 NOL3O60936 208 aaKnown RBP19.91■□□□□ 0.78
SNX27-203ENST00000368843 CUL4BQ13620 913 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 CEP128Q6ZU80 1094 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 VPS54Q9P1Q0 977 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 SLAIN2Q9P270 581 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 VIMP08670 466 aaKnown RBP19.91■□□□□ 0.78
SNX27-203ENST00000368843 DEPTORQ8TB45 409 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 LLPHQ9BRT6 129 aaKnown RBP19.91■□□□□ 0.78
SNX27-203ENST00000368843 IL13P35225 146 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 TRIM31Q9BZY9 425 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 ZBTB7BO15156 539 aaPredicted RBP19.91■□□□□ 0.78
SNX27-203ENST00000368843 TUBB4AP04350 444 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 BCRP11274 1271 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 P4HA1P13674 534 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 NCAPG2Q86XI2 1143 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 BLZF1Q9H2G9 400 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 KIAA0556O60303 1618 aa19.91■□□□□ 0.78
SNX27-203ENST00000368843 ALAS1P13196 640 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 TNFAIP1Q13829 316 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 INTS8Q75QN2 995 aaKnown RBP19.9■□□□□ 0.78
SNX27-203ENST00000368843 AFG3L2Q9Y4W6 797 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 ARHGAP44Q17R89 818 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 CCDC110Q8TBZ0 833 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 ATXN8OSP0DMR3 200 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 PPP2R3AQ06190 1150 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 IFRD2Q12894 506 aaPredicted RBP19.9■□□□□ 0.78
SNX27-203ENST00000368843 SEPT14Q6ZU15 432 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 NELFBQ8WX92 580 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 PPARAQ07869 468 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 EPSTI1Q96J88 318 aa19.9■□□□□ 0.78
SNX27-203ENST00000368843 YARSP54577 528 aaKnown RBP19.9■□□□□ 0.78
SNX27-203ENST00000368843 MAST1Q9Y2H9 1570 aa19.89■□□□□ 0.77
SNX27-203ENST00000368843 ARPP21Q9UBL0 812 aaPredicted RBP19.89■□□□□ 0.77
SNX27-203ENST00000368843 SMCO2A6NFE2 343 aa19.89■□□□□ 0.77
SNX27-203ENST00000368843 CIB2O75838 187 aa19.89■□□□□ 0.77
SNX27-203ENST00000368843 KBTBD3Q8NAB2 608 aa19.89■□□□□ 0.77
SNX27-203ENST00000368843 GNPTABQ3T906 1256 aa19.89■□□□□ 0.77
SNX27-203ENST00000368843 CHURC1Q8WUH1 139 aa19.89■□□□□ 0.77
SNX27-203ENST00000368843 PSMB7Q99436 277 aa19.89■□□□□ 0.77
SNX27-203ENST00000368843 PALM3A6NDB9 673 aaPredicted RBP19.89■□□□□ 0.77
SNX27-203ENST00000368843 REXO1Q8N1G1 1221 aaKnown RBP19.88■□□□□ 0.77
SNX27-203ENST00000368843 SLC9C1Q4G0N8 1177 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 NAPGQ99747 312 aaPredicted RBP19.88■□□□□ 0.77
SNX27-203ENST00000368843 TAB2Q9NYJ8 693 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 ACTN4O43707 911 aaKnown RBP19.88■□□□□ 0.77
SNX27-203ENST00000368843 FAM193BQ96PV7 902 aaPredicted RBP19.88■□□□□ 0.77
SNX27-203ENST00000368843 BABAM1Q9NWV8 329 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 FAM184BQ9ULE4 1060 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 NR1I2O75469 434 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 TUBB4BP68371 445 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 C8orf74Q6P047 294 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 ASIC3Q9UHC3 531 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 PSMD6Q15008 389 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 FYB2Q5VWT5 728 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 NBPF11Q86T75 865 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.88■□□□□ 0.77
SNX27-203ENST00000368843 KIAA0825Q8IV33 1275 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 FAM76AQ8TAV0 307 aa19.88■□□□□ 0.77
SNX27-203ENST00000368843 RPS8P62241 208 aaKnown RBP19.87■□□□□ 0.77
SNX27-203ENST00000368843 SESTD1Q86VW0 696 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 CMTR1Q8N1G2 835 aaKnown RBP19.87■□□□□ 0.77
SNX27-203ENST00000368843 NUP58Q9BVL2 599 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 LRRC47Q8N1G4 583 aaKnown RBP19.87■□□□□ 0.77
SNX27-203ENST00000368843 AFAP1L2Q8N4X5 818 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 ST7Q9NRC1 585 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 CYP2J2P51589 502 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 ERCC6LQ2NKX8 1250 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 POSTNQ15063 836 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 SULF1Q8IWU6 871 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 CCDC89Q8N998 374 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 STAMQ92783 540 aa19.87■□□□□ 0.77
SNX27-203ENST00000368843 BSPRYQ5W0U4 402 aa19.86■□□□□ 0.77
SNX27-203ENST00000368843 MMS19Q96T76 1030 aa19.86■□□□□ 0.77
SNX27-203ENST00000368843 PIK3C2GO75747 1445 aa19.86■□□□□ 0.77
SNX27-203ENST00000368843 GYG1P46976 350 aa19.86■□□□□ 0.77
SNX27-203ENST00000368843 PNMA6EA0A0J9YXQ4 647 aa19.86■□□□□ 0.77
SNX27-203ENST00000368843 STIM2Q9P246 746 aa19.86■□□□□ 0.77
SNX27-203ENST00000368843 PRPF31Q8WWY3 499 aaKnown RBP19.86■□□□□ 0.77
SNX27-203ENST00000368843 SECISBP2LQ93073 1101 aaKnown RBP19.86■□□□□ 0.77
SNX27-203ENST00000368843 ZNF202O95125 648 aa19.86■□□□□ 0.77
SNX27-203ENST00000368843 PRR16Q569H4 304 aa19.86■□□□□ 0.77
SNX27-203ENST00000368843 HDXQ7Z353 690 aa19.86■□□□□ 0.77
SNX27-203ENST00000368843 C10orf67Q8IYJ2 551 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms