RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SPRYD3Q8NCJ5 442 aa14.4□□□□□ -0.1
TUBE1-202ENST00000368662 CEP95Q96GE4 821 aa14.4□□□□□ -0.1
TUBE1-202ENST00000368662 LLPHQ9BRT6 129 aaKnown RBP14.4□□□□□ -0.1
TUBE1-202ENST00000368662 SENP2Q9HC62 589 aa14.4□□□□□ -0.1
TUBE1-202ENST00000368662 MTMR4Q9NYA4 1195 aa14.4□□□□□ -0.1
TUBE1-202ENST00000368662 NID2Q14112 1375 aa14.4□□□□□ -0.1
TUBE1-202ENST00000368662 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 TTLL1O95922 423 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 MICU3Q86XE3 530 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 CDAN1Q8IWY9 1227 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 NECAB1Q8N987 351 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 KANSL2Q9H9L4 492 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 GINM1Q9NU53 330 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 HPS5Q9UPZ3 1129 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 POTECB2RU33 542 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 TOP1P11387 765 aaKnown RBP14.39□□□□□ -0.11
TUBE1-202ENST00000368662 CPLX2Q6PUV4 134 aaKnown RBP14.39□□□□□ -0.11
TUBE1-202ENST00000368662 MIGA2Q7L4E1 593 aa14.39□□□□□ -0.11
TUBE1-202ENST00000368662 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.39□□□□□ -0.11
TUBE1-202ENST00000368662 SCAF8Q9UPN6 1271 aaKnown RBP14.39□□□□□ -0.11
TUBE1-202ENST00000368662 GOLGA8AA7E2F4 631 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 CPLX1O14810 134 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 CDKL5O76039 1030 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 VEGFAP15692 232 aaPredicted RBP14.38□□□□□ -0.11
TUBE1-202ENST00000368662 CCT2P78371 535 aaKnown RBP14.38□□□□□ -0.11
TUBE1-202ENST00000368662 EAPPQ56P03 285 aaPredicted RBP14.38□□□□□ -0.11
TUBE1-202ENST00000368662 NBPF12Q5TAG4 269 aaPredicted RBP14.38□□□□□ -0.11
TUBE1-202ENST00000368662 PNMA1Q8ND90 353 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 MAP3K14Q99558 947 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 SMC3Q9UQE7 1217 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 GREB1LQ9C091 1923 aaPredicted RBP14.38□□□□□ -0.11
TUBE1-202ENST00000368662 GDF11O95390 407 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 SLURP2P0DP57 97 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 ST3GAL1Q11201 340 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 TROAPQ12815 778 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 FANCBQ8NB91 859 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 TMEM47Q9BQJ4 181 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 ZNF341Q9BYN7 854 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
TUBE1-202ENST00000368662 RBM28Q9NW13 759 aaKnown RBP14.38□□□□□ -0.11
TUBE1-202ENST00000368662 GH2P01242 217 aa14.37□□□□□ -0.11
TUBE1-202ENST00000368662 CAP2P40123 477 aa14.37□□□□□ -0.11
TUBE1-202ENST00000368662 HMGN5P82970 282 aaKnown RBP14.37□□□□□ -0.11
TUBE1-202ENST00000368662 RTN1Q16799 776 aa14.37□□□□□ -0.11
TUBE1-202ENST00000368662 NUP133Q8WUM0 1156 aa14.37□□□□□ -0.11
TUBE1-202ENST00000368662 NYAP2Q9P242 653 aa14.37□□□□□ -0.11
TUBE1-202ENST00000368662 ASNSP08243 561 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 PDIA4P13667 645 aaKnown RBP14.36□□□□□ -0.11
TUBE1-202ENST00000368662 KIF5BP33176 963 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 ICA1Q05084 483 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 CTCFLQ8NI51 663 aaPredicted RBP14.36□□□□□ -0.11
TUBE1-202ENST00000368662 CIZ1Q9ULV3 898 aaPredicted RBP14.36□□□□□ -0.11
TUBE1-202ENST00000368662 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 KIF3AQ9Y496 699 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 PHF20L1A8MW92 1017 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 CTNND1O60716 968 aaKnown RBP14.36□□□□□ -0.11
TUBE1-202ENST00000368662 RAB3GAP1Q15042 981 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 CDC37L1Q7L3B6 337 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 MKL1Q969V6 931 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 MYL10Q9BUA6 226 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 NCOA5Q9HCD5 579 aaKnown RBP14.36□□□□□ -0.11
TUBE1-202ENST00000368662 CLIP2Q9UDT6 1046 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 ZBTB21Q9ULJ3 1066 aa14.36□□□□□ -0.11
TUBE1-202ENST00000368662 RXRAP19793 462 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 NF2P35240 595 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 SEPT2Q15019 361 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 NSUN7Q8NE18 718 aaKnown RBP14.35□□□□□ -0.11
TUBE1-202ENST00000368662 SMARCC2Q8TAQ2 1214 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 GJB2P29033 226 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 GUCY1A2P33402 732 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 DDIT3P35638 169 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 RRP1BQ14684 758 aaKnown RBP14.35□□□□□ -0.11
TUBE1-202ENST00000368662 RAB11FIP4Q86YS3 637 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 CCDC144CPQ8IYA2 1237 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 RRAGCQ9HB90 399 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 ZNF112Q9UJU3 913 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
TUBE1-202ENST00000368662 POLR2AP24928 1970 aaKnown RBP14.34□□□□□ -0.11
TUBE1-202ENST00000368662 ADM5C9JUS6 153 aa14.34□□□□□ -0.11
TUBE1-202ENST00000368662 PPP1R12BO60237 982 aaPredicted RBP14.34□□□□□ -0.11
TUBE1-202ENST00000368662 PDCP20941 246 aa14.34□□□□□ -0.11
TUBE1-202ENST00000368662 CDC27P30260 824 aa14.34□□□□□ -0.11
TUBE1-202ENST00000368662 ADD1P35611 737 aaKnown RBP14.34□□□□□ -0.11
TUBE1-202ENST00000368662 GNAQP50148 359 aa14.34□□□□□ -0.11
TUBE1-202ENST00000368662 USP48Q86UV5 1035 aa14.34□□□□□ -0.11
TUBE1-202ENST00000368662 SH2D4AQ9H788 454 aa14.34□□□□□ -0.11
TUBE1-202ENST00000368662 ARHGEF10LQ9HCE6 1279 aa14.34□□□□□ -0.11
TUBE1-202ENST00000368662 CHMP5Q9NZZ3 219 aa14.34□□□□□ -0.11
TUBE1-202ENST00000368662 PTPDC1A2A3K4 754 aa14.33□□□□□ -0.11
TUBE1-202ENST00000368662 CTDNEP1O95476 244 aa14.33□□□□□ -0.11
TUBE1-202ENST00000368662 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.11
TUBE1-202ENST00000368662 IFNAR1P17181 557 aa14.33□□□□□ -0.11
TUBE1-202ENST00000368662 ATP2B2Q01814 1243 aa14.33□□□□□ -0.11
TUBE1-202ENST00000368662 PRAMEF18Q5VWM3 479 aa14.33□□□□□ -0.11
TUBE1-202ENST00000368662 FAM184AQ8NB25 1140 aa14.33□□□□□ -0.11
TUBE1-202ENST00000368662 FAM217BQ9NTX9 383 aaPredicted RBP14.33□□□□□ -0.11
TUBE1-202ENST00000368662 NUCB2P80303 420 aa14.33□□□□□ -0.12
TUBE1-202ENST00000368662 GRM4Q14833 912 aa14.33□□□□□ -0.12
TUBE1-202ENST00000368662 LDHDQ86WU2 507 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms