RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 CELF1Q92879 486 aaKnown RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 XPO4Q9C0E2 1151 aaKnown RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 DCP1AQ9NPI6 582 aaPredicted RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 TACC3Q9Y6A5 838 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 THSD7AQ9UPZ6 1657 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 LAMB1P07942 1786 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 GNPATO15228 680 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 ZSCAN12O43309 604 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
TPM3-209ENST00000368527 SLFN14P0C7P3 912 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 SARSP49591 514 aaKnown RBP11.67□□□□□ -0.54
TPM3-209ENST00000368527 UBASH3AP57075 661 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 MORC3Q14149 939 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 LONRF3Q496Y0 759 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 NYAP1Q6ZVC0 841 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 TMC6Q7Z403 805 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 ADGRA1Q86SQ6 560 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 CCAR2Q8N163 923 aaKnown RBP11.67□□□□□ -0.54
TPM3-209ENST00000368527 CCDC148Q8NFR7 591 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 GSDMAQ96QA5 445 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 CTAGE1Q96RT6 745 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 ZKSCAN3Q9BRR0 538 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 CABP5Q9NP86 173 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 INCENPQ9NQS7 918 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 KCNJ14Q9UNX9 436 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 PCDHA5Q9Y5H7 936 aa11.67□□□□□ -0.54
TPM3-209ENST00000368527 TSPY2A6NKD2 308 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 BIN1O00499 593 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 LAD1O00515 517 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 RIOK3O14730 519 aaKnown RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 NPHP1O15259 732 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 POLR2DO15514 142 aaKnown RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 MYL1P05976 194 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 TOP1P11387 765 aaKnown RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 SCG2P13521 617 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 SMARCA1P28370 1054 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 HOXA7P31268 230 aaPredicted RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 GUCY1A2P33402 732 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 RFC4P35249 363 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 TXLNAP40222 546 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 PLCD1P51178 756 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 DYNLL1P63167 89 aaKnown RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 ORC2Q13416 577 aaPredicted RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 PNOCQ13519 176 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 PKN1Q16512 942 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 VSTM4Q8IW00 320 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 C17orf53Q8N3J3 647 aaPredicted RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 NKX2-3Q8TAU0 364 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 CCDC12Q8WUD4 166 aaPredicted RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 CLIC6Q96NY7 704 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 KAT14Q9H8E8 782 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 RMND1Q9NWS8 449 aa11.66□□□□□ -0.54
TPM3-209ENST00000368527 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
TPM3-209ENST00000368527 CNTNAP5Q8WYK1 1306 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 IRS2Q9Y4H2 1338 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 MYH13Q9UKX3 1938 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 ACTN4O43707 911 aaKnown RBP11.65□□□□□ -0.54
TPM3-209ENST00000368527 ATP2B4P23634 1241 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 LONP1P36776 959 aaKnown RBP11.65□□□□□ -0.54
TPM3-209ENST00000368527 ATP2C1P98194 919 aaPredicted RBP11.65□□□□□ -0.54
TPM3-209ENST00000368527 CFAP100Q494V2 611 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 TTC38Q5R3I4 469 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 C12orf60Q5U649 245 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 IQUBQ8NA54 791 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 DAGLBQ8NCG7 672 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 TBC1D22AQ8WUA7 517 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 C16orf45Q96MC5 204 aaPredicted RBP11.65□□□□□ -0.54
TPM3-209ENST00000368527 MAN1B1Q9UKM7 699 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 PCDHB6Q9Y5E3 794 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 CCDC88AQ3V6T2 1871 aa11.65□□□□□ -0.54
TPM3-209ENST00000368527 BTAF1O14981 1849 aa11.65□□□□□ -0.55
TPM3-209ENST00000368527 hCG_1984214I3L0E3 225 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 ARHGAP6O43182 974 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 LMOD1P29536 600 aaPredicted RBP11.64□□□□□ -0.55
TPM3-209ENST00000368527 TM4SF1P30408 202 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 USP5P45974 858 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 NLRP5P59047 1200 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 SPAG1Q07617 926 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 NR5A1Q13285 461 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 FILIP1LQ4L180 1135 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 BICDL1Q6ZP65 573 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 SH3RF1Q7Z6J0 888 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 ZNF713Q8N859 430 aaPredicted RBP11.64□□□□□ -0.55
TPM3-209ENST00000368527 CNBD1Q8NA66 436 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 ANKRD7Q92527 254 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 ARHGEF1Q92888 912 aaKnown RBP11.64□□□□□ -0.55
TPM3-209ENST00000368527 TNFRSF25Q93038 417 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 SRRTQ9BXP5 876 aaKnown RBP11.64□□□□□ -0.55
TPM3-209ENST00000368527 CSRNP2Q9H175 543 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 MAGEF1Q9HAY2 307 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 CGNQ9P2M7 1197 aaKnown RBP11.64□□□□□ -0.55
TPM3-209ENST00000368527 SERTAD1Q9UHV2 236 aa11.64□□□□□ -0.55
TPM3-209ENST00000368527 LY75O60449 1722 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 BBOX1O75936 387 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 ZNF18P17022 549 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms