RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 HIBADHP31937 336 aaKnown RBP20.68■□□□□ 0.9
UBQLN4-201ENST00000368309 TXNRD3Q86VQ6 643 aa20.68■□□□□ 0.9
UBQLN4-201ENST00000368309 NLRP3Q96P20 1036 aa20.68■□□□□ 0.9
UBQLN4-201ENST00000368309 DCP1AQ9NPI6 582 aaPredicted RBP20.68■□□□□ 0.9
UBQLN4-201ENST00000368309 MYH2Q9UKX2 1941 aa20.68■□□□□ 0.9
UBQLN4-201ENST00000368309 SYCP1Q15431 976 aa20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 NT5DC1Q5TFE4 455 aa20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 ELOA2Q8IYF1 753 aaPredicted RBP20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 SRBD1Q8N5C6 995 aaKnown RBP20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 MLKLQ8NB16 471 aa20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 CICQ96RK0 1608 aaPredicted RBP20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 NBPF5PQ86XG9 351 aaPredicted RBP20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 KLHL10Q6JEL2 608 aa20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 SETDB2Q96T68 719 aa20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 BAZ2AQ9UIF9 1905 aaKnown RBP20.67■□□□□ 0.9
UBQLN4-201ENST00000368309 BARGINQ6ZT62 677 aa20.66■□□□□ 0.9
UBQLN4-201ENST00000368309 SLC51AQ86UW1 340 aa20.66■□□□□ 0.9
UBQLN4-201ENST00000368309 STAMQ92783 540 aa20.66■□□□□ 0.9
UBQLN4-201ENST00000368309 SYMPKQ92797 1274 aaKnown RBP20.66■□□□□ 0.9
UBQLN4-201ENST00000368309 KIF2AO00139 706 aaPredicted RBP20.66■□□□□ 0.9
UBQLN4-201ENST00000368309 TMTC3Q6ZXV5 915 aa20.66■□□□□ 0.9
UBQLN4-201ENST00000368309 RBM28Q9NW13 759 aaKnown RBP20.66■□□□□ 0.9
UBQLN4-201ENST00000368309 FGRP09769 529 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 STX17P56962 302 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 SLC10A5Q5PT55 438 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 CTCFLQ8NI51 663 aaPredicted RBP20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 ENOX1Q8TC92 643 aaKnown RBP20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 ADKP55263 362 aaKnown RBP20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 PIP4K2BP78356 416 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 NPY5RQ15761 445 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 KANK3Q6NY19 840 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 CRNKL1Q9BZJ0 848 aaKnown RBP20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 VWA3AA6NCI4 1184 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 ADAMTS3O15072 1205 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 SLU7O95391 586 aaKnown RBP20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 ELF2Q15723 593 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 TMX1Q9H3N1 280 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 DNAI1Q9UI46 699 aa20.65■□□□□ 0.9
UBQLN4-201ENST00000368309 CACNA1SQ13698 1873 aa20.64■□□□□ 0.9
UBQLN4-201ENST00000368309 ZNF18P17022 549 aa20.64■□□□□ 0.9
UBQLN4-201ENST00000368309 DHX8Q14562 1220 aaKnown RBP20.64■□□□□ 0.9
UBQLN4-201ENST00000368309 SMYD4Q8IYR2 804 aaPredicted RBP20.64■□□□□ 0.9
UBQLN4-201ENST00000368309 FAM177A1Q8N128 213 aaPredicted RBP20.64■□□□□ 0.9
UBQLN4-201ENST00000368309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.64■□□□□ 0.9
UBQLN4-201ENST00000368309 CALM1P0DP23 149 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 CALM2P0DP24 149 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 CALM3P0DP25 149 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 PTGDRQ13258 359 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 FAM182BQ5T319 152 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 LRRN4CLQ8ND94 238 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 BRMS1Q9HCU9 246 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 DACH1Q9UI36 760 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 TSPY2A6NKD2 308 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 KCNJ6P48051 423 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 PAGE5Q96GU1 130 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 MCM9Q9NXL9 1143 aa20.64■□□□□ 0.89
UBQLN4-201ENST00000368309 TTC38Q5R3I4 469 aa20.63■□□□□ 0.89
UBQLN4-201ENST00000368309 PIK3AP1Q6ZUJ8 805 aa20.63■□□□□ 0.89
UBQLN4-201ENST00000368309 GNPATO15228 680 aa20.63■□□□□ 0.89
UBQLN4-201ENST00000368309 USP17L8P0C7I0 530 aa20.63■□□□□ 0.89
UBQLN4-201ENST00000368309 NLRP5P59047 1200 aa20.63■□□□□ 0.89
UBQLN4-201ENST00000368309 SPATA20Q8TB22 786 aa20.63■□□□□ 0.89
UBQLN4-201ENST00000368309 ERO1AQ96HE7 468 aa20.63■□□□□ 0.89
UBQLN4-201ENST00000368309 CNTNAP5Q8WYK1 1306 aa20.63■□□□□ 0.89
UBQLN4-201ENST00000368309 COBLO75128 1261 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 SLFN14P0C7P3 912 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 CGNQ9P2M7 1197 aaKnown RBP20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 MYO1BO43795 1136 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 ZPR1O75312 459 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 DDAH1O94760 285 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 CD44P16070 742 aaKnown RBP20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 TRIML1Q8N9V2 468 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 TNFRSF25Q93038 417 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 WNK3Q9BYP7 1800 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 ETF1P62495 437 aaKnown RBP20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 AMIGO3Q86WK7 504 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 NARFQ9UHQ1 456 aa20.62■□□□□ 0.89
UBQLN4-201ENST00000368309 COL22A1Q8NFW1 1626 aaPredicted RBP20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 SEMA3EO15041 775 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 PLCD1P51178 756 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 SPECC1LQ69YQ0 1117 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 TMEM139Q8IV31 216 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 MTMR7Q9Y216 660 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 AHDC1Q5TGY3 1603 aaPredicted RBP20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 ORC4O43929 436 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 PCP11498 1178 aaKnown RBP20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 MCM7P33993 719 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 DUOX1Q9NRD9 1551 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 KMT5BQ4FZB7 885 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 TPTE2Q6XPS3 522 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 REXO1L1PQ8IX06 675 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 BAG1Q99933 345 aaPredicted RBP20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 NYXQ9GZU5 481 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 ATP8A2Q9NTI2 1148 aa20.61■□□□□ 0.89
UBQLN4-201ENST00000368309 TBX2Q13207 712 aaPredicted RBP20.6■□□□□ 0.89
UBQLN4-201ENST00000368309 DZIP1Q86YF9 867 aaKnown RBP20.6■□□□□ 0.89
UBQLN4-201ENST00000368309 FERMT2Q96AC1 680 aa20.6■□□□□ 0.89
UBQLN4-201ENST00000368309 SCG2P13521 617 aa20.6■□□□□ 0.89
UBQLN4-201ENST00000368309 ERCC6LQ2NKX8 1250 aa20.6■□□□□ 0.89
UBQLN4-201ENST00000368309 TRIM65Q6PJ69 517 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms