RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 HIP1O00291 1037 aa26.77■■□□□ 1.88
ECHDC1-203ENST00000368291 RASA1P20936 1047 aa26.77■■□□□ 1.88
ECHDC1-203ENST00000368291 CAP1Q01518 475 aa26.77■■□□□ 1.88
ECHDC1-203ENST00000368291 C17orf99Q6UX52 265 aa26.77■■□□□ 1.88
ECHDC1-203ENST00000368291 SIAH1Q8IUQ4 282 aa26.77■■□□□ 1.88
ECHDC1-203ENST00000368291 TNS4Q8IZW8 715 aa26.77■■□□□ 1.88
ECHDC1-203ENST00000368291 IL25Q9H293 177 aa26.77■■□□□ 1.88
ECHDC1-203ENST00000368291 EMILIN3Q9NT22 766 aa26.77■■□□□ 1.88
ECHDC1-203ENST00000368291 SP3Q02447 781 aa26.76■■□□□ 1.87
ECHDC1-203ENST00000368291 PPARAQ07869 468 aa26.76■■□□□ 1.87
ECHDC1-203ENST00000368291 CLEC10AQ8IUN9 316 aa26.76■■□□□ 1.87
ECHDC1-203ENST00000368291 A0A1W2PRG0 241 aa26.75■■□□□ 1.87
ECHDC1-203ENST00000368291 FGAP02671 866 aa26.75■■□□□ 1.87
ECHDC1-203ENST00000368291 PARK7Q99497 189 aaKnown RBP26.75■■□□□ 1.87
ECHDC1-203ENST00000368291 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.75■■□□□ 1.87
ECHDC1-203ENST00000368291 KIAA1683Q9H0B3 1180 aa26.75■■□□□ 1.87
ECHDC1-203ENST00000368291 MGAMO43451 1857 aa26.75■■□□□ 1.87
ECHDC1-203ENST00000368291 MYH4Q9Y623 1939 aa26.75■■□□□ 1.87
ECHDC1-203ENST00000368291 USP17L2Q6R6M4 530 aa26.74■■□□□ 1.87
ECHDC1-203ENST00000368291 C12orf42Q96LP6 360 aa26.74■■□□□ 1.87
ECHDC1-203ENST00000368291 TMOD4Q9NZQ9 345 aa26.74■■□□□ 1.87
ECHDC1-203ENST00000368291 CPA4Q9UI42 421 aa26.74■■□□□ 1.87
ECHDC1-203ENST00000368291 TACC3Q9Y6A5 838 aa26.74■■□□□ 1.87
ECHDC1-203ENST00000368291 LAMA4Q16363 1823 aa26.74■■□□□ 1.87
ECHDC1-203ENST00000368291 ZYXQ15942 572 aaKnown RBP26.73■■□□□ 1.87
ECHDC1-203ENST00000368291 CTU1Q7Z7A3 348 aaKnown RBP26.73■■□□□ 1.87
ECHDC1-203ENST00000368291 CD99L2Q8TCZ2 262 aa26.73■■□□□ 1.87
ECHDC1-203ENST00000368291 MKNK2Q9HBH9 465 aa26.73■■□□□ 1.87
ECHDC1-203ENST00000368291 ANAPC4Q9UJX5 808 aa26.73■■□□□ 1.87
ECHDC1-203ENST00000368291 ZMYM6O95789 1325 aa26.73■■□□□ 1.87
ECHDC1-203ENST00000368291 PRDM1O75626 825 aa26.72■■□□□ 1.87
ECHDC1-203ENST00000368291 CHMLP26374 656 aa26.72■■□□□ 1.87
ECHDC1-203ENST00000368291 HOXA7P31268 230 aaPredicted RBP26.72■■□□□ 1.87
ECHDC1-203ENST00000368291 CTDSPL2Q05D32 466 aa26.72■■□□□ 1.87
ECHDC1-203ENST00000368291 FEZ1Q99689 392 aa26.72■■□□□ 1.87
ECHDC1-203ENST00000368291 MCOLN1Q9GZU1 580 aa26.72■■□□□ 1.87
ECHDC1-203ENST00000368291 BCRP11274 1271 aa26.71■■□□□ 1.87
ECHDC1-203ENST00000368291 MFAP1P55081 439 aaKnown RBP26.71■■□□□ 1.87
ECHDC1-203ENST00000368291 ASCC2Q9H1I8 757 aaPredicted RBP26.71■■□□□ 1.87
ECHDC1-203ENST00000368291 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.71■■□□□ 1.87
ECHDC1-203ENST00000368291 USP14P54578 494 aa26.71■■□□□ 1.87
ECHDC1-203ENST00000368291 ICA1Q05084 483 aa26.71■■□□□ 1.87
ECHDC1-203ENST00000368291 ERO1AQ96HE7 468 aa26.71■■□□□ 1.87
ECHDC1-203ENST00000368291 INCENPQ9NQS7 918 aa26.71■■□□□ 1.87
ECHDC1-203ENST00000368291 RLFQ13129 1914 aa26.7■■□□□ 1.87
ECHDC1-203ENST00000368291 PARP14Q460N5 1801 aa26.7■■□□□ 1.86
ECHDC1-203ENST00000368291 PDE4BQ07343 736 aa26.7■■□□□ 1.86
ECHDC1-203ENST00000368291 PABPC4Q13310 644 aaKnown RBP eCLIP26.7■■□□□ 1.86
ECHDC1-203ENST00000368291 KANSL2Q9H9L4 492 aa26.7■■□□□ 1.86
ECHDC1-203ENST00000368291 ZNF287Q9HBT7 754 aa26.7■■□□□ 1.86
ECHDC1-203ENST00000368291 PNMA3Q9UL41 463 aa26.7■■□□□ 1.86
ECHDC1-203ENST00000368291 DOCK3Q8IZD9 2030 aa26.69■■□□□ 1.86
ECHDC1-203ENST00000368291 IGKV6D-41A0A0C4DH26 115 aa26.69■■□□□ 1.86
ECHDC1-203ENST00000368291 KIAA1755Q5JYT7 1200 aa26.69■■□□□ 1.86
ECHDC1-203ENST00000368291 ZNF444Q8N0Y2 327 aaPredicted RBP26.69■■□□□ 1.86
ECHDC1-203ENST00000368291 TMX2Q9Y320 296 aa26.69■■□□□ 1.86
ECHDC1-203ENST00000368291 SLC3A2P08195 630 aaKnown RBP26.68■■□□□ 1.86
ECHDC1-203ENST00000368291 FGRP09769 529 aa26.68■■□□□ 1.86
ECHDC1-203ENST00000368291 EEF2P13639 858 aaKnown RBP26.68■■□□□ 1.86
ECHDC1-203ENST00000368291 VCAM1P19320 739 aa26.68■■□□□ 1.86
ECHDC1-203ENST00000368291 LACTBP83111 547 aaPredicted RBP26.68■■□□□ 1.86
ECHDC1-203ENST00000368291 ERICH6BQ5W0A0 696 aa26.68■■□□□ 1.86
ECHDC1-203ENST00000368291 OTOP1Q7RTM1 612 aa26.68■■□□□ 1.86
ECHDC1-203ENST00000368291 ARHGAP39Q9C0H5 1083 aa26.68■■□□□ 1.86
ECHDC1-203ENST00000368291 NBPF3Q9H094 633 aa26.68■■□□□ 1.86
ECHDC1-203ENST00000368291 PLIN4Q96Q06 1357 aa26.67■■□□□ 1.86
ECHDC1-203ENST00000368291 OSBPP22059 807 aa26.67■■□□□ 1.86
ECHDC1-203ENST00000368291 CTGFP29279 349 aa26.67■■□□□ 1.86
ECHDC1-203ENST00000368291 SMCR8Q8TEV9 937 aaPredicted RBP26.67■■□□□ 1.86
ECHDC1-203ENST00000368291 P2RX7Q99572 595 aaKnown RBP26.67■■□□□ 1.86
ECHDC1-203ENST00000368291 DSCC1Q9BVC3 393 aa26.67■■□□□ 1.86
ECHDC1-203ENST00000368291 ARHGEF10LQ9HCE6 1279 aa26.67■■□□□ 1.86
ECHDC1-203ENST00000368291 RAD50Q92878 1312 aa26.66■■□□□ 1.86
ECHDC1-203ENST00000368291 TRIM17Q9Y577 477 aa26.66■■□□□ 1.86
ECHDC1-203ENST00000368291 HAND2P61296 217 aa26.65■■□□□ 1.86
ECHDC1-203ENST00000368291 FAM47AQ5JRC9 791 aa26.65■■□□□ 1.86
ECHDC1-203ENST00000368291 POTEEQ6S8J3 1075 aa26.65■■□□□ 1.86
ECHDC1-203ENST00000368291 NEDD1Q8NHV4 660 aa26.65■■□□□ 1.86
ECHDC1-203ENST00000368291 PPP4R2Q9NY27 417 aa26.65■■□□□ 1.86
ECHDC1-203ENST00000368291 NYAP2Q9P242 653 aa26.65■■□□□ 1.86
ECHDC1-203ENST00000368291 IRX3P78415 501 aaPredicted RBP26.64■■□□□ 1.86
ECHDC1-203ENST00000368291 BMP2KLQ5H9B9 411 aa26.64■■□□□ 1.86
ECHDC1-203ENST00000368291 CATSPERGQ6ZRH7 1159 aa26.64■■□□□ 1.86
ECHDC1-203ENST00000368291 ANKRD13CQ8N6S4 541 aa26.64■■□□□ 1.86
ECHDC1-203ENST00000368291 VCPKMTQ9H867 229 aa26.64■■□□□ 1.86
ECHDC1-203ENST00000368291 USP17L15C9J2P7 530 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 USP17L13C9JLJ4 530 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 USP17L11C9JVI0 530 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 USP17L18D6R9N7 530 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 USP17L22D6RA61 530 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 USP17L17D6RBQ6 530 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 USP17L19D6RCP7 530 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 USP17L20D6RJB6 530 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 ORC4O43929 436 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 GCLCP48506 637 aaPredicted RBP26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 HERVK_113P62684 666 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 TFAP4Q01664 338 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 ATP2B2Q01814 1243 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 USP17L24Q0WX57 530 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 PKN2Q16513 984 aaKnown RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms