RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TTLL3Q9Y4R7 772 aa14.38□□□□□ -0.11
PTPRK-207ENST00000368226 PDE6AP16499 860 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 CBX8Q9HC52 389 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 SEC31BQ9NQW1 1179 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 AOX1Q06278 1338 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
PTPRK-207ENST00000368226 NCAPG2Q86XI2 1143 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 RAB3IL1Q8TBN0 382 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 DDX12PQ92771 950 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 NACA2Q9H009 215 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 ZBTB1Q9Y2K1 713 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 DYNC1I1O14576 645 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 GAS7O60861 476 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 CSPG5O95196 566 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 CYP2J2P51589 502 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 SLC8A3P57103 927 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 DBNDD1Q9H9R9 158 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 C6orf163Q5TEZ5 329 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 TRPC6Q9Y210 931 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 CCDC6Q16204 474 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 INF2Q27J81 1249 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 CERKLQ49MI3 558 aaPredicted RBP14.37□□□□□ -0.11
PTPRK-207ENST00000368226 ABCA5Q8WWZ7 1642 aa14.37□□□□□ -0.11
PTPRK-207ENST00000368226 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-207ENST00000368226 COBLO75128 1261 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 ADD1P35611 737 aaKnown RBP14.36□□□□□ -0.11
PTPRK-207ENST00000368226 CALCOCO2Q13137 446 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 MIER3Q7Z3K6 550 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 JAKMIP2Q96AA8 810 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 TSGA10Q9BZW7 698 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 MLXIPQ9HAP2 919 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 PPANQ9NQ55 473 aaKnown RBP14.36□□□□□ -0.11
PTPRK-207ENST00000368226 MTUS1Q9ULD2 1270 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 PCDHB13Q9Y5F0 798 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 EP400NLQ6ZTU2 488 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 KRT222Q8N1A0 295 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 PALD1Q9ULE6 856 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 TSPOAP1O95153 1857 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 HSPA4P34932 840 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 FAM196AQ6ZSG2 479 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 DSCC1Q9BVC3 393 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 FAM207AQ9NSI2 230 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-207ENST00000368226 MLH3Q9UHC1 1453 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 TNNI1P19237 187 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 IGBP1P78318 339 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 ERFEQ4G0M1 354 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 PPEF1O14829 653 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-207ENST00000368226 OPA1O60313 960 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 ERCC5P28715 1186 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-207ENST00000368226 PPP2R5CQ13362 524 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 CFAP58Q5T655 872 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 NLRX1Q86UT6 975 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 GPR101Q96P66 508 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-207ENST00000368226 NLRC4Q9NPP4 1024 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 CTTNBP2NLQ9P2B4 639 aa14.36□□□□□ -0.11
PTPRK-207ENST00000368226 IGSF3O75054 1194 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 TNNC1P63316 161 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 SF3A3Q12874 501 aaKnown RBP eCLIP14.35□□□□□ -0.111e-6■■■■□ 21.5
PTPRK-207ENST00000368226 ATL3Q6DD88 541 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 NSRP1Q9H0G5 558 aaKnown RBP14.35□□□□□ -0.11
PTPRK-207ENST00000368226 TNKSO95271 1327 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 MAP3K15Q6ZN16 1313 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 HSPD1P10809 573 aaKnown RBP14.35□□□□□ -0.11
PTPRK-207ENST00000368226 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
PTPRK-207ENST00000368226 IPO4Q8TEX9 1081 aaKnown RBP14.35□□□□□ -0.11
PTPRK-207ENST00000368226 NFE2L3Q9Y4A8 694 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 DNM2P50570 870 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 IFRD2Q12894 506 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-207ENST00000368226 PKNOX2Q96KN3 472 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 M0QZ92 97 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 PRPF6O94906 941 aaKnown RBP14.35□□□□□ -0.11
PTPRK-207ENST00000368226 PPP2R3AQ06190 1150 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 FAM204AQ9H8W3 233 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 MTRF1LQ9UGC7 380 aaKnown RBP14.35□□□□□ -0.11
PTPRK-207ENST00000368226 KDM5AP29375 1690 aaKnown RBP14.35□□□□□ -0.11
PTPRK-207ENST00000368226 ATP2B4P23634 1241 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 HPDP32754 393 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-207ENST00000368226 NLRP12P59046 1061 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 MTX1Q13505 466 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 HAUS7Q99871 368 aa14.35□□□□□ -0.11
PTPRK-207ENST00000368226 ZNF804BA4D1E1 1349 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 HGSO14964 777 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-207ENST00000368226 DYNLL1P63167 89 aaKnown RBP14.34□□□□□ -0.11
PTPRK-207ENST00000368226 CYP26C1Q6V0L0 522 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 GPBP1Q86WP2 473 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 PPM1EQ8WY54 764 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 HOOK2Q96ED9 719 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 CHAMP1Q96JM3 812 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTPRK-207ENST00000368226 FLOT1O75955 427 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 MYCP01106 439 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-207ENST00000368226 ICA1Q05084 483 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 SESTD1Q86VW0 696 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 UGGT1Q9NYU2 1555 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 POLA2Q14181 598 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 GEN1Q17RS7 908 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 KLHL7Q8IXQ5 586 aa14.34□□□□□ -0.11
PTPRK-207ENST00000368226 RABEP2Q9H5N1 569 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms