RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 SYT10Q6XYQ8 523 aa16.1■□□□□ 0.17
SNHG28-201ENST00000368102 DIS3L2Q8IYB7 885 aaKnown RBP16.1■□□□□ 0.17
SNHG28-201ENST00000368102 TRMT44Q8IYL2 757 aaKnown RBP16.1■□□□□ 0.17
SNHG28-201ENST00000368102 CRACR2BQ8N4Y2 399 aaPredicted RBP16.1■□□□□ 0.17
SNHG28-201ENST00000368102 TUBE1Q9UJT0 475 aa16.1■□□□□ 0.17
SNHG28-201ENST00000368102 KCNH3Q9ULD8 1083 aa16.1■□□□□ 0.17
SNHG28-201ENST00000368102 CACNA1SQ13698 1873 aa16.1■□□□□ 0.17
SNHG28-201ENST00000368102 A0A1B0GUL6 1792 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 CCDC196A0A1B0GTZ2 297 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 SFPQP23246 707 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNHG28-201ENST00000368102 TXNRD3Q86VQ6 643 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 CNNM3Q8NE01 707 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 MYH6P13533 1939 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 BTAF1O14981 1849 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 NRDCO43847 1150 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 PRDM1O75626 825 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 CASP1P29466 404 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 RFC4P35249 363 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 CCDC93Q567U6 631 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 NOM1Q5C9Z4 860 aaKnown RBP16.09■□□□□ 0.17
SNHG28-201ENST00000368102 INTS13Q9NVM9 706 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 CALCOCO1Q9P1Z2 691 aa16.09■□□□□ 0.17
SNHG28-201ENST00000368102 WNT7AO00755 349 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 FANCGO15287 622 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 PPP6R2O75170 966 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 SERPINC1P01008 464 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 MMP1P03956 469 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 PRDX5P30044 214 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 RCAN1P53805 252 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 UBASH3AP57075 661 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 CFAP100Q494V2 611 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 CTR9Q6PD62 1173 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 NOSTRINQ8IVI9 506 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 TMX1Q9H3N1 280 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 ZNF446Q9NWS9 450 aa16.08■□□□□ 0.17
SNHG28-201ENST00000368102 USP17L12C9JPN9 530 aa16.08■□□□□ 0.16
SNHG28-201ENST00000368102 USP17L21D6R901 530 aa16.08■□□□□ 0.16
SNHG28-201ENST00000368102 POLR2DO15514 142 aaKnown RBP16.08■□□□□ 0.16
SNHG28-201ENST00000368102 DEXIO95424 95 aa16.08■□□□□ 0.16
SNHG28-201ENST00000368102 FMR1Q06787 632 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNHG28-201ENST00000368102 EARS2Q5JPH6 523 aaKnown RBP16.08■□□□□ 0.16
SNHG28-201ENST00000368102 KRBA2Q6ZNG9 492 aa16.08■□□□□ 0.16
SNHG28-201ENST00000368102 ENAHQ8N8S7 591 aaPredicted RBP16.08■□□□□ 0.16
SNHG28-201ENST00000368102 JMYQ8N9B5 988 aa16.08■□□□□ 0.16
SNHG28-201ENST00000368102 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
SNHG28-201ENST00000368102 ZSCAN10Q96SZ4 725 aaPredicted RBP16.08■□□□□ 0.16
SNHG28-201ENST00000368102 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNHG28-201ENST00000368102 JAG2Q9Y219 1238 aa16.08■□□□□ 0.16
SNHG28-201ENST00000368102 PDS5AQ29RF7 1337 aaKnown RBP16.07■□□□□ 0.16
SNHG28-201ENST00000368102 SAFBQ15424 915 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNHG28-201ENST00000368102 TRAPPC3LQ5T215 181 aa16.07■□□□□ 0.16
SNHG28-201ENST00000368102 RGS17Q9UGC6 210 aaPredicted RBP16.07■□□□□ 0.16
SNHG28-201ENST00000368102 SERTAD1Q9UHV2 236 aa16.07■□□□□ 0.16
SNHG28-201ENST00000368102 CASZ1Q86V15 1759 aa16.07■□□□□ 0.16
SNHG28-201ENST00000368102 CCP110O43303 1012 aa16.07■□□□□ 0.16
SNHG28-201ENST00000368102 SLC4A8Q2Y0W8 1093 aa16.07■□□□□ 0.16
SNHG28-201ENST00000368102 MYL5Q02045 173 aa16.06■□□□□ 0.16
SNHG28-201ENST00000368102 FAM196AQ6ZSG2 479 aa16.06■□□□□ 0.16
SNHG28-201ENST00000368102 SLC51AQ86UW1 340 aa16.06■□□□□ 0.16
SNHG28-201ENST00000368102 FAM177A1Q8N128 213 aaPredicted RBP16.06■□□□□ 0.16
SNHG28-201ENST00000368102 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.06■□□□□ 0.16
SNHG28-201ENST00000368102 COL24A1Q17RW2 1714 aa16.06■□□□□ 0.16
SNHG28-201ENST00000368102 FGRP09769 529 aa16.06■□□□□ 0.16
SNHG28-201ENST00000368102 KRI1Q8N9T8 703 aaKnown RBP16.06■□□□□ 0.16
SNHG28-201ENST00000368102 CABP5Q9NP86 173 aa16.06■□□□□ 0.16
SNHG28-201ENST00000368102 DCP1AQ9NPI6 582 aaPredicted RBP16.06■□□□□ 0.16
SNHG28-201ENST00000368102 VPS54Q9P1Q0 977 aa16.06■□□□□ 0.16
SNHG28-201ENST00000368102 FBXO2Q9UK22 296 aaPredicted RBP16.06■□□□□ 0.16
SNHG28-201ENST00000368102 TRPC5Q9UL62 973 aaPredicted RBP16.06■□□□□ 0.16
SNHG28-201ENST00000368102 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNHG28-201ENST00000368102 NHSQ6T4R5 1651 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 THSD7AQ9UPZ6 1657 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 COBLO75128 1261 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 TPM4P67936 248 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
SNHG28-201ENST00000368102 NFIXQ14938 502 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 IFIT1BQ5T764 474 aaKnown RBP16.05■□□□□ 0.16
SNHG28-201ENST00000368102 IQCA1Q86XH1 822 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 MED15Q96RN5 788 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 NOL10Q9BSC4 688 aaKnown RBP16.05■□□□□ 0.16
SNHG28-201ENST00000368102 CRNKL1Q9BZJ0 848 aaKnown RBP16.05■□□□□ 0.16
SNHG28-201ENST00000368102 MAN1B1Q9UKM7 699 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 A0A087X0B3 334 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 IKBKBO14920 756 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 CUTAO60888 179 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
SNHG28-201ENST00000368102 PPP2R5BQ15173 497 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 ERCC6LQ2NKX8 1250 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 POTEAQ6S8J7 498 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 FOXP1Q9H334 677 aaPredicted RBP16.05■□□□□ 0.16
SNHG28-201ENST00000368102 TMEM51Q9NW97 253 aa16.05■□□□□ 0.16
SNHG28-201ENST00000368102 IRS2Q9Y4H2 1338 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
SNHG28-201ENST00000368102 ANKIB1Q9P2G1 1089 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 FHOD1Q9Y613 1164 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 PHLPP2Q6ZVD8 1323 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 PLEKHA8P1O95397 391 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 CYP2C19P33261 490 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 CLCN6P51797 869 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 CATIPQ7Z7H3 387 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms